FFCP PHASE1:Hg19::chr17:17480334..17480356,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10400 | |EntrezGene=10400 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8830 | |HGNC=8830 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBM1 | |UniProt=Q9UBM1 | ||
|association_with_transcript=-8bp_to_CR457099_5end | |association_with_transcript=-8bp_to_CR457099_5end | ||
|cluster_id=chr17:17480334..17480356,- | |||
|coexpression_cluster_id=C220 | |||
|description=CAGE_peak_9_at_PEMT_5end | |description=CAGE_peak_9_at_PEMT_5end | ||
|id=chr17:17480334..17480356,- | |id=chr17:17480334..17480356,- | ||
|ontology_enrichment_celltype=CL:0000136!2.65e-18!15;CL:0000325!2.61e-10!39 | |ontology_enrichment_celltype=CL:0000136!2.65e-18!15;CL:0000325!2.61e-10!39 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.00e-65;13!CL:0002521;3.15e-19;3!CL:0002615;5.79e-19;3!CL:0002617;3.45e-13;2!CL:0000650;1.18e-12;2!CL:1000500;1.18e-12;2!CL:1000618;1.18e-12;2!CL:1001318;1.18e-12;2!CL:0002173;1.18e-12;2!CL:1000746;5.67e-08;7!CL:1000612;5.67e-08;7!CL:0000669;9.51e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.31e-56,15;CL:0002521,3.06e-19,3;CL:0002615,6.34e-19,3;CL:0002617,3.46e-13,2;CL:0000650,9.60e-13,2;CL:1000500,9.60e-13,2;CL:1000618,9.60e-13,2;CL:1001318,9.60e-13,2;CL:0002173,9.60e-13,2;CL:1000746,4.90e-08,7;CL:1000612,4.90e-08,7;CL:0000669,8.59e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.60e-13;2!UBERON:0000358;3.62e-07;1!UBERON:0005754;3.62e-07;1!UBERON:0004874;5.67e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!3.12e-07!11 | |ontology_enrichment_uberon=UBERON:0003135!3.12e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002190;3.15e-19;3!UBERON:0003135;1.05e-18;11!UBERON:0006947;3.10e-18;3!UBERON:0004054;3.10e-18;3!UBERON:0005904;8.08e-14;4!UBERON:0003567;1.18e-12;2!UBERON:0003838;1.18e-12;2!UBERON:0003586;1.18e-12;2!UBERON:0005169;1.18e-12;2!UBERON:0002321;1.18e-12;2!UBERON:0005215;1.18e-12;2!UBERON:0002303;1.18e-12;2!UBERON:0002319;1.18e-12;2!UBERON:0003101;3.73e-12;22!UBERON:0000079;3.73e-12;22!UBERON:0002072;9.56e-12;5!UBERON:0001013;8.26e-11;14!UBERON:0003688;9.77e-10;6!UBERON:0002358;9.77e-10;6!UBERON:0003684;9.77e-10;6!UBERON:0001178;9.77e-10;6!UBERON:0000074;5.67e-08;7!UBERON:0001229;5.67e-08;7!UBERON:0001301;1.74e-07;1!UBERON:0000473;3.27e-07;8!UBERON:0005795;3.62e-07;1!UBERON:0000998;3.62e-07;1!UBERON:0006868;3.62e-07;1!UBERON:0001000;5.67e-07;1!UBERON:0000989;5.67e-07;1!UBERON:0008811;5.67e-07;1!UBERON:0005352;5.67e-07;1!UBERON:0003891;9.51e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.06e-19,3;UBERON:0003135,1.01e-18,11;UBERON:0004876,1.14e-18,11;UBERON:0006947,3.39e-18,3;UBERON:0004054,3.39e-18,3;UBERON:0000080,3.15e-16,9;UBERON:0002120,3.15e-16,9;UBERON:0004875,3.15e-16,9;UBERON:0005721,3.15e-16,9;UBERON:0005754,3.15e-16,9;UBERON:0007297,3.15e-16,9;UBERON:0005904,8.63e-14,4;UBERON:0003567,9.60e-13,2;UBERON:0003838,9.60e-13,2;UBERON:0003586,9.60e-13,2;UBERON:0005169,9.60e-13,2;UBERON:0002321,9.60e-13,2;UBERON:0005215,9.60e-13,2;UBERON:0002303,9.60e-13,2;UBERON:0002319,9.60e-13,2;UBERON:0003101,3.73e-12,22;UBERON:0000079,3.73e-12,22;UBERON:0003887,4.00e-12,12;UBERON:0005103,5.24e-12,8;UBERON:0000083,5.24e-12,8;UBERON:0009201,5.24e-12,8;UBERON:0006553,5.24e-12,8;UBERON:0003074,5.24e-12,8;UBERON:0003060,5.24e-12,8;UBERON:0002072,9.40e-12,5;UBERON:0001013,8.01e-11,14;UBERON:0000058,1.50e-10,19;UBERON:0003688,1.02e-09,6;UBERON:0002358,1.02e-09,6;UBERON:0003684,1.02e-09,6;UBERON:0001178,1.02e-09,6;UBERON:0003064,2.41e-09,28;UBERON:0003886,2.91e-09,54;UBERON:0010532,4.90e-08,7;UBERON:0000074,4.90e-08,7;UBERON:0001229,4.90e-08,7;UBERON:0001230,4.90e-08,7;UBERON:0003220,4.90e-08,7;UBERON:0005749,4.90e-08,7;UBERON:0004199,4.90e-08,7;UBERON:0004209,4.90e-08,7;UBERON:0004198,4.90e-08,7;UBERON:0002553,5.31e-08,61;UBERON:0001301,1.74e-07,1;UBERON:0000473,3.04e-07,8;UBERON:0000998,3.21e-07,1;UBERON:0006868,3.21e-07,1;UBERON:0000989,5.19e-07,1;UBERON:0008811,5.19e-07,1;UBERON:0006258,5.19e-07,1;UBERON:0005876,5.19e-07,1;UBERON:0004874,5.19e-07,1;UBERON:0001000,6.97e-07,1;UBERON:0005352,6.97e-07,1;UBERON:0003891,8.59e-07,4 | |||
|phase1_expression=2.36181893051724,33.3996817269934,5.21531295155093,7.00513088471913,22.7950158157917,0.872338524100369,65.8579683237607,13.8978372153903,6.26845507679612,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,2.0956652079634,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0.81014194788176,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0.438977620880838,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0.300343057843917,0,0,0,0,0,7.15312891703765,0,0,0,0,1.41849132023278,0.266422179016099,0,31.4720531127037,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,1.54227252690289,1.89662506280697,6.02027728625824,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,0,0.462145851343933,0.614014698904518,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0.2023155617111,0.464845549297286,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0.282810863907425,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,7.03239260505091,0.121360521749513,0,0.568272293612826,0,0,0,0,0,0,0,0.211125408127993,0,0.552567831062295,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,10.1499940560871,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,1.23120413606075,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0.234264445725339,0,0,0.242780379534093,1.18375320854817,0,0,0,0.150323419414493,0,0,0,0.313932918407225,0,0.853828638089378,0.138674673013139,0,0,0,8.91106008034354,0,0,0,0.0821154570532092,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0.199679000498991,0.858452096273142,0,0.0671834724867263,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.550157746388935,0,0,0,0,0,0.315222829196793,0.157363764404994,0.105600336519406,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,13.0564272808674,18.3003622636571,19.912462489625,4.59021682993726,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0.149254802886874,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0.126831620387814,0,0,1.48863353516788,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,1.33438257845874,0,0,0,0,0,0,0,1.3948971044175,0,0,0,0,0,0,0.118332000730565,0,2.54032230114557,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0.109265571963696,0,0.101988829741982,0.26721740526556,0,0,6.59274674498683,5.62724673327975,0,0,0,0,0.0645889098360061,0,0.448527450322454,0,0,0,0,0,0,0,0,0,0,0.269475606319761,2.34640942403454,0.733448665097199,2.44137706989443,0.665756774185513,0.201273793591026,0 | |phase1_expression=2.36181893051724,33.3996817269934,5.21531295155093,7.00513088471913,22.7950158157917,0.872338524100369,65.8579683237607,13.8978372153903,6.26845507679612,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,2.0956652079634,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0.81014194788176,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0.438977620880838,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0.300343057843917,0,0,0,0,0,7.15312891703765,0,0,0,0,1.41849132023278,0.266422179016099,0,31.4720531127037,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,1.54227252690289,1.89662506280697,6.02027728625824,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,0,0.462145851343933,0.614014698904518,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0.2023155617111,0.464845549297286,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0.282810863907425,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,7.03239260505091,0.121360521749513,0,0.568272293612826,0,0,0,0,0,0,0,0.211125408127993,0,0.552567831062295,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,10.1499940560871,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,1.23120413606075,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0.234264445725339,0,0,0.242780379534093,1.18375320854817,0,0,0,0.150323419414493,0,0,0,0.313932918407225,0,0.853828638089378,0.138674673013139,0,0,0,8.91106008034354,0,0,0,0.0821154570532092,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0.199679000498991,0.858452096273142,0,0.0671834724867263,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.550157746388935,0,0,0,0,0,0.315222829196793,0.157363764404994,0.105600336519406,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,13.0564272808674,18.3003622636571,19.912462489625,4.59021682993726,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0.149254802886874,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0.126831620387814,0,0,1.48863353516788,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,1.33438257845874,0,0,0,0,0,0,0,1.3948971044175,0,0,0,0,0,0,0.118332000730565,0,2.54032230114557,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0.109265571963696,0,0.101988829741982,0.26721740526556,0,0,6.59274674498683,5.62724673327975,0,0,0,0,0.0645889098360061,0,0.448527450322454,0,0,0,0,0,0,0,0,0,0,0.269475606319761,2.34640942403454,0.733448665097199,2.44137706989443,0.665756774185513,0.201273793591026,0 | ||
|short_description=p9@PEMT | |short_description=p9@PEMT | ||
}} | }} |
Latest revision as of 21:39, 18 September 2015
Short description: | p9@PEMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PEMT_5end |
Coexpression cluster: | C220_Adipocyte_mature_left_breast_skin_liver_adipose |
Association with transcript: | -8bp_to_CR457099_5end |
EntrezGene: | PEMT |
HGNC: | 8830 |
UniProt: | Q9UBM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.31e-56 | 15 |
subcutaneous fat cell | 3.06e-19 | 3 |
adipocyte of omentum tissue | 6.34e-19 | 3 |
adipocyte of breast | 3.46e-13 | 2 |
mesangial cell | 9.60e-13 | 2 |
kidney interstitial cell | 9.60e-13 | 2 |
juxtaglomerular complex cell | 9.60e-13 | 2 |
renal interstitial pericyte | 9.60e-13 | 2 |
extraglomerular mesangial cell | 9.60e-13 | 2 |
glomerular cell | 4.90e-08 | 7 |
kidney corpuscule cell | 4.90e-08 | 7 |
pericyte cell | 8.59e-07 | 4 |