FFCP PHASE1:Hg19::chr10:69835001..69835086,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26091 | |EntrezGene=26091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24521 | |HGNC=24521 | ||
|TSSclassifier=strong | |||
|UniProt=Q5GLZ8,D6RCL5 | |UniProt=Q5GLZ8,D6RCL5 | ||
|association_with_transcript=0bp_to_ENST00000395185,ENST00000395198,ENST00000412272,ENST00000473533,ENST00000492996,ENST00000513996_5end | |||
|cluster_id=chr10:69835001..69835086,- | |||
|description=CAGE_peak_1_at_HERC4_5end | |||
|id=chr10:69835001..69835086,- | |||
|ontology_enrichment_celltype=CL:0002620!9.24e-09!23;CL:0000542!1.15e-07!53;CL:0000051!1.15e-07!53;CL:0000838!1.98e-07!52;CL:0000791!4.58e-07!18;CL:0000789!4.58e-07!18;CL:0002420!4.58e-07!18;CL:0002419!4.58e-07!18;CL:0000790!4.58e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.14e-09;23!CL:0000791;4.71e-07;18!CL:0000789;4.71e-07;18!CL:0002419;4.71e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,9.24e-09,23;CL:0000542,1.15e-07,53;CL:0000051,1.15e-07,53;CL:0000838,1.98e-07,52;CL:0000791,4.58e-07,18;CL:0000789,4.58e-07,18;CL:0002420,4.58e-07,18;CL:0002419,4.58e-07,18;CL:0000790,4.58e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;4.71e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@HERC4 | |||
}} | }} |
Latest revision as of 22:29, 18 September 2015
Short description: | p1@HERC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HERC4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000395185, ENST00000395198, ENST00000412272, ENST00000473533, ENST00000492996, ENST00000513996_5end |
EntrezGene: | HERC4 |
HGNC: | 24521 |
UniProt: | Q5GLZ8D6RCL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 9.24e-09 | 23 |
lymphocyte | 1.15e-07 | 53 |
common lymphoid progenitor | 1.15e-07 | 53 |
lymphoid lineage restricted progenitor cell | 1.98e-07 | 52 |
mature alpha-beta T cell | 4.58e-07 | 18 |
alpha-beta T cell | 4.58e-07 | 18 |
immature T cell | 4.58e-07 | 18 |
mature T cell | 4.58e-07 | 18 |
immature alpha-beta T cell | 4.58e-07 | 18 |