FFCP PHASE1:Hg19::chr11:112035098..112035114,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3606 | |EntrezGene=3606 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5986 | |HGNC=5986 | ||
|TSSclassifier=strong | |||
|UniProt=Q14116,Q6WWJ7 | |UniProt=Q14116,Q6WWJ7 | ||
|association_with_transcript=-258bp_to_ENST00000280357,NM_001243211,NM_001562,uc001pnb.1,uc009yym.1_5end | |||
|cluster_id=chr11:112035098..112035114,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_IL18_5end | |||
|id=chr11:112035098..112035114,- | |||
|ontology_enrichment_celltype=CL:0000860!6.54e-54!45;CL:0002057!1.02e-53!42;CL:0002194!8.61e-46!63;CL:0000576!8.61e-46!63;CL:0000040!8.61e-46!63;CL:0000559!8.61e-46!63;CL:0002009!3.41e-44!65;CL:0000839!1.36e-40!70;CL:0000557!6.19e-40!71;CL:0000766!8.46e-40!76;CL:0002087!7.30e-27!119;CL:0000763!7.53e-27!112;CL:0000049!7.53e-27!112;CL:0000738!1.89e-23!140;CL:0002031!9.28e-22!124;CL:0000037!4.19e-19!172;CL:0000566!4.19e-19!172;CL:0000988!1.22e-17!182;CL:0002032!2.70e-17!165;CL:0000837!2.70e-17!165;CL:0002393!9.99e-08!9;CL:0002397!9.99e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.08e-62;33!CL:0002057;6.08e-62;33!CL:0000473;1.06e-44;39!CL:0000234;1.06e-44;39!CL:0000576;8.51e-36;48!CL:0000766;4.39e-26;69!CL:0002087;9.72e-15;104!CL:0002393;6.03e-14;6!CL:0002397;6.03e-14;6!CL:0000763;5.16e-10;100!CL:0000738;4.87e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.76e-75,42;CL:0002057,3.76e-75,42;CL:0000473,2.00e-65,48;CL:0000234,2.00e-65,48;CL:0002194,8.40e-52,59;CL:0000576,8.40e-52,59;CL:0000040,8.40e-52,59;CL:0000559,8.40e-52,59;CL:0002009,4.82e-50,61;CL:0000839,4.19e-46,66;CL:0000557,2.19e-45,67;CL:0000766,4.35e-42,72;CL:0002087,2.08e-28,115;CL:0000763,2.96e-27,108;CL:0000049,2.96e-27,108;CL:0002031,2.88e-24,120;CL:0000738,1.33e-23,136;CL:0000037,1.45e-18,168;CL:0000988,1.80e-17,177;CL:0002032,2.22e-17,161;CL:0000837,2.22e-17,161;CL:0002393,1.84e-09,9;CL:0002397,1.84e-09,9;CL:0000134,3.63e-08,354;CL:0002320,6.06e-08,361;CL:0000219,3.71e-07,386;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.42e-53;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.92e-35!80;UBERON:0002390!1.70e-32!102;UBERON:0003061!1.70e-32!102;UBERON:0001474!7.37e-32!86;UBERON:0002193!5.84e-29!112;UBERON:0004765!3.66e-26!101;UBERON:0001434!3.66e-26!101;UBERON:0002405!7.66e-26!115;UBERON:0002204!2.11e-14!167;UBERON:0003081!1.31e-13!216;UBERON:0000926!7.26e-07!448;UBERON:0004120!7.26e-07!448;UBERON:0006603!7.26e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.30e-40,76;UBERON:0001474,1.11e-36,82;UBERON:0002390,8.74e-34,98;UBERON:0003061,8.74e-34,98;UBERON:0004765,3.28e-33,90;UBERON:0002405,4.64e-32,93;UBERON:0002193,2.03e-30,108;UBERON:0001434,1.22e-29,100;UBERON:0002204,1.18e-16,167;UBERON:0003081,7.47e-15,203;UBERON:0000926,1.38e-09,315;UBERON:0004120,1.38e-09,315;UBERON:0006603,1.38e-09,315;UBERON:0002384,1.22e-07,371 | |||
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| ||
|short_description=p6@IL18 | |||
}} | }} |
Latest revision as of 05:12, 25 September 2015
Short description: | p6@IL18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IL18_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -258bp_to_ENST00000280357, NM_001243211, NM_001562, uc001pnb.1, uc009yym.1_5end |
EntrezGene: | IL18 |
HGNC: | 5986 |
UniProt: | Q14116Q6WWJ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.76e-75 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.76e-75 | 42 |
defensive cell | 2.00e-65 | 48 |
phagocyte | 2.00e-65 | 48 |
monopoietic cell | 8.40e-52 | 59 |
monocyte | 8.40e-52 | 59 |
monoblast | 8.40e-52 | 59 |
promonocyte | 8.40e-52 | 59 |
macrophage dendritic cell progenitor | 4.82e-50 | 61 |
myeloid lineage restricted progenitor cell | 4.19e-46 | 66 |
granulocyte monocyte progenitor cell | 2.19e-45 | 67 |
myeloid leukocyte | 4.35e-42 | 72 |
nongranular leukocyte | 2.08e-28 | 115 |
myeloid cell | 2.96e-27 | 108 |
common myeloid progenitor | 2.96e-27 | 108 |
hematopoietic lineage restricted progenitor cell | 2.88e-24 | 120 |
leukocyte | 1.33e-23 | 136 |
hematopoietic stem cell | 1.45e-18 | 168 |
hematopoietic cell | 1.80e-17 | 177 |
hematopoietic oligopotent progenitor cell | 2.22e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.22e-17 | 161 |
intermediate monocyte | 1.84e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.84e-09 | 9 |
mesenchymal cell | 3.63e-08 | 354 |
connective tissue cell | 6.06e-08 | 361 |
motile cell | 3.71e-07 | 386 |
stem cell | 9.09e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.30e-40 | 76 |
bone element | 1.11e-36 | 82 |
hematopoietic system | 8.74e-34 | 98 |
blood island | 8.74e-34 | 98 |
skeletal element | 3.28e-33 | 90 |
immune system | 4.64e-32 | 93 |
hemolymphoid system | 2.03e-30 | 108 |
skeletal system | 1.22e-29 | 100 |
musculoskeletal system | 1.18e-16 | 167 |
lateral plate mesoderm | 7.47e-15 | 203 |
mesoderm | 1.38e-09 | 315 |
mesoderm-derived structure | 1.38e-09 | 315 |
presumptive mesoderm | 1.38e-09 | 315 |
connective tissue | 1.22e-07 | 371 |