FFCP PHASE1:Hg19::chr17:38709213..38709216,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38709213..38709216,+ | |||
|description=CAGE_peak_at_chr17:38709213..38709216,+ | |description=CAGE_peak_at_chr17:38709213..38709216,+ | ||
|id=chr17:38709213..38709216,+ | |id=chr17:38709213..38709216,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.87e-11!75;CL:0000055!3.58e-10!180;CL:0002334!2.88e-08!12;CL:0000569!4.45e-08!4;CL:0000011!4.45e-08!4 | |ontology_enrichment_celltype=CL:0000057!1.87e-11!75;CL:0000055!3.58e-10!180;CL:0002334!2.88e-08!12;CL:0000569!4.45e-08!4;CL:0000011!4.45e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002582;9.68e-19;3!CL:0000569;3.36e-14;4!CL:0002602;2.64e-13;2!CL:0002334;2.36e-12;12!CL:0000214;1.24e-09;3!CL:0000135;1.47e-09;3!CL:0000388;1.47e-09;3!CL:0000515;2.28e-09;3!CL:0000680;1.67e-08;7!CL:0000056;3.15e-07;4!CL:0000153;7.84e-07;9!CL:0000447;7.84e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002582,7.85e-19,3;CL:0000569,2.62e-14,4;CL:0000011,2.62e-14,4;CL:0002602,1.42e-13,2;CL:0002334,2.02e-12,12;CL:0000214,1.25e-09,3;CL:0000135,1.36e-09,3;CL:0000388,1.36e-09,3;CL:0000057,1.18e-07,76;CL:0000515,3.41e-07,4;CL:0000153,9.38e-07,9;CL:0000447,9.38e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000011;3.36e-14;4!CL:0000515;3.15e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.14e-08!27;UBERON:0004905!7.54e-07!5;UBERON:0000982!7.54e-07!5;UBERON:0004770!7.54e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;2.26e-19;8!UBERON:0000982;2.26e-19;8!UBERON:0004770;2.26e-19;8!UBERON:0006444;2.64e-13;2!UBERON:0001995;2.64e-13;2!UBERON:0004715;2.64e-13;2!UBERON:0011135;1.55e-11;5!UBERON:0002216;1.55e-11;5!UBERON:0011134;1.55e-11;5!UBERON:0002209;1.55e-11;5!UBERON:0002213;1.55e-11;5!UBERON:0007844;1.55e-11;5!UBERON:0011138;1.55e-11;5!UBERON:0001130;1.55e-11;5!UBERON:0001066;1.55e-11;5!UBERON:0001468;1.55e-11;5!UBERON:0004457;2.97e-11;9!UBERON:0000042;2.97e-11;9!UBERON:0006915;1.24e-09;3!UBERON:0007616;1.24e-09;3!UBERON:0002217;1.24e-09;3!UBERON:0002018;1.24e-09;3!UBERON:0007846;1.47e-09;3!UBERON:0000043;1.47e-09;3!UBERON:0007845;1.47e-09;3!UBERON:0002418;3.66e-09;3!UBERON:0004755;3.66e-09;3!UBERON:0007195;7.99e-08;1!UBERON:0002134;1.03e-07;1!UBERON:0005208;1.03e-07;1!UBERON:0004145;1.03e-07;1!UBERON:0005946;1.03e-07;1!UBERON:0005965;1.03e-07;1!UBERON:0002078;1.03e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,1.38e-19,8;UBERON:0000982,1.38e-19,8;UBERON:0004770,1.38e-19,8;UBERON:0006444,1.42e-13,2;UBERON:0001995,1.42e-13,2;UBERON:0004715,1.42e-13,2;UBERON:0011135,9.67e-12,5;UBERON:0002216,9.67e-12,5;UBERON:0011134,9.67e-12,5;UBERON:0002209,9.67e-12,5;UBERON:0002213,9.67e-12,5;UBERON:0005856,9.67e-12,5;UBERON:0005866,9.67e-12,5;UBERON:0005863,9.67e-12,5;UBERON:0007844,9.67e-12,5;UBERON:0011138,9.67e-12,5;UBERON:0001130,9.67e-12,5;UBERON:0001066,9.67e-12,5;UBERON:0001468,9.67e-12,5;UBERON:0006915,1.25e-09,3;UBERON:0007616,1.25e-09,3;UBERON:0002217,1.25e-09,3;UBERON:0002018,1.25e-09,3;UBERON:0007846,1.36e-09,3;UBERON:0000043,1.36e-09,3;UBERON:0007845,1.36e-09,3;UBERON:0002418,2.43e-09,3;UBERON:0004755,2.43e-09,3;UBERON:0004457,1.83e-08,12;UBERON:0000042,1.83e-08,12;UBERON:0007195,8.00e-08,1;UBERON:0002134,1.03e-07,1;UBERON:0005208,1.03e-07,1;UBERON:0005946,1.03e-07,1;UBERON:0005965,1.03e-07,1;UBERON:0002078,1.03e-07,1 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,1.34088328328186,0,0,0.631719873426831,0.522371256399677,0,0,0,0,1.98026164736075,3.64537113300707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.434539556882471,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.529636723252875,0,0,0,1.06748995729705,0,0,0,0,0.151357427644931,0,0,0.312160076830321,0,0.896692083310806,0,0,0,3.0623125688234,0.122834317311768,1.54988671763648,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.751190294532984,0.113432183160021,0,0,0.635795703478686,0,0.206105058476878,1.03056216018252,0.18611685633159,0.168776332241266,0,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,3.04040744001916,2.4657158706046,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,1.50051156317903,0.813795071099207,0.623912584592421,0.535286966391485,1.26161932027148,0,0,0,1.03473071292505,0,0,0.60818530127658,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,1.15325234330131,0,0.482561763430822,0,0,1.59805552781814,1.8067974323038,1.03850885836724,2.67283870457906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0,0.537101224341368,1.0151168573996,0.340906509664404,0,0,0,0,0,0,0.62962469366128,0.6970372701606,0,0,0.869932992075073,0,0,0,0.632758849437452,0.571890581771475,0,0,0.636406495851874,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,1.10273068709225,0,0,0,0,0,0,0,0,0,0,0,4.85547561184627,32.6001944030303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0.276283915531148,0,0,0.123084805461069,0.311039587661807,0,0,0,0,0,5.55684950723184,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,3.58936512288407,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,2.53733164907686,1.63599316893057,0.554805861502613,0.757612021100357,0.50313580350515,11.567545880755,0.686520205190771,1.96600200892211,2.02068360757615,1.18284119991707,0,0,0,0.829412415681711,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,12.0165663444169,3.8936390591141,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0.0673520530145875,0.573777643141411,0.332660356546013,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 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|phase1_expression=0.363356758541113,0,0.140954404095971,0,1.34088328328186,0,0,0.631719873426831,0.522371256399677,0,0,0,0,1.98026164736075,3.64537113300707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.434539556882471,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.529636723252875,0,0,0,1.06748995729705,0,0,0,0,0.151357427644931,0,0,0.312160076830321,0,0.896692083310806,0,0,0,3.0623125688234,0.122834317311768,1.54988671763648,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.751190294532984,0.113432183160021,0,0,0.635795703478686,0,0.206105058476878,1.03056216018252,0.18611685633159,0.168776332241266,0,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,3.04040744001916,2.4657158706046,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,1.50051156317903,0.813795071099207,0.623912584592421,0.535286966391485,1.26161932027148,0,0,0,1.03473071292505,0,0,0.60818530127658,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,1.15325234330131,0,0.482561763430822,0,0,1.59805552781814,1.8067974323038,1.03850885836724,2.67283870457906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0,0.537101224341368,1.0151168573996,0.340906509664404,0,0,0,0,0,0,0.62962469366128,0.6970372701606,0,0,0.869932992075073,0,0,0,0.632758849437452,0.571890581771475,0,0,0.636406495851874,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,1.10273068709225,0,0,0,0,0,0,0,0,0,0,0,4.85547561184627,32.6001944030303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0.276283915531148,0,0,0.123084805461069,0.311039587661807,0,0,0,0,0,5.55684950723184,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,3.58936512288407,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,2.53733164907686,1.63599316893057,0.554805861502613,0.757612021100357,0.50313580350515,11.567545880755,0.686520205190771,1.96600200892211,2.02068360757615,1.18284119991707,0,0,0,0.829412415681711,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,12.0165663444169,3.8936390591141,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0.0673520530145875,0.573777643141411,0.332660356546013,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p@chr17:38709213..38709216,+ | |short_description=p@chr17:38709213..38709216,+ | ||
}} | }} |
Latest revision as of 16:32, 25 July 2015
Short description: | p@chr17:38709213..38709216, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38709213..38709216, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
visceral preadipocyte | 7.85e-19 | 3 |
cardiac mesenchymal cell | 2.62e-14 | 4 |
migratory trunk neural crest cell | 2.62e-14 | 4 |
annulus pulposus cell | 1.42e-13 | 2 |
preadipocyte | 2.02e-12 | 12 |
synovial cell | 1.25e-09 | 3 |
fibrocyte | 1.36e-09 | 3 |
tendon cell | 1.36e-09 | 3 |
fibroblast | 1.18e-07 | 76 |
skeletal muscle myoblast | 3.41e-07 | 4 |
GAG secreting cell | 9.38e-07 | 9 |
carbohydrate secreting cell | 9.38e-07 | 9 |