FFCP PHASE1:Hg19::chr22:27622699..27622733,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_uc003adh.2_5end | |association_with_transcript=26bp_to_uc003adh.2_5end | ||
|cluster_id=chr22:27622699..27622733,- | |||
|coexpression_cluster_id=C2641 | |||
|description=CAGE_peak_1_at_uc003adh.2_5end | |description=CAGE_peak_1_at_uc003adh.2_5end | ||
|id=chr22:27622699..27622733,- | |id=chr22:27622699..27622733,- | ||
|ontology_enrichment_celltype=CL:0000077!2.01e-21!19;CL:0000057!8.03e-14!75;CL:0002334!7.59e-12!12;CL:0000055!7.88e-10!180;CL:0000144!1.73e-09!625;CL:0002620!4.62e-08!23;CL:0000548!1.02e-07!679;CL:0000004!1.02e-07!679;CL:0000255!1.02e-07!679;CL:0000012!1.52e-07!682 | |ontology_enrichment_celltype=CL:0000077!2.01e-21!19;CL:0000057!8.03e-14!75;CL:0002334!7.59e-12!12;CL:0000055!7.88e-10!180;CL:0000144!1.73e-09!625;CL:0002620!4.62e-08!23;CL:0000548!1.02e-07!679;CL:0000004!1.02e-07!679;CL:0000255!1.02e-07!679;CL:0000012!1.52e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.75e-30;19!CL:0002577;1.10e-13;3!CL:0000174;2.53e-13;3!CL:0002580;1.72e-12;3!CL:0002097;7.77e-10;2!CL:0002334;5.70e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.80e-30,19;CL:0002577,1.10e-13,3;CL:0000174,1.75e-13,3;CL:0002580,1.11e-12,3;CL:0002097,7.79e-10,2;CL:0000213,1.41e-09,58;CL:0000215,1.41e-09,58;CL:0002334,3.80e-08,12;CL:0000076,2.74e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.95e-10!14;DOID:193!6.60e-09!29;DOID:120!3.04e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.65e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.80e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007625!2.37e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.26e-10;4!UBERON:0002369;8.25e-07;3!UBERON:0001235;8.25e-07;3!UBERON:0006858;8.25e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,2.27e-10,4;UBERON:0004340,2.27e-10,4;UBERON:0002369,8.26e-07,3;UBERON:0001235,8.26e-07,3;UBERON:0006858,8.26e-07,3 | |||
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| ||
|short_description=p1@uc003adh.2 | |short_description=p1@uc003adh.2 | ||
}} | }} |
Latest revision as of 19:50, 28 July 2015
Short description: | p1@uc003adh.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc003adh.2_5end |
Coexpression cluster: | C2641_mesothelioma_pagetoid_Mesothelial_Placental_mesenchymal_astrocytoma_lens |
Association with transcript: | 26bp_to_uc003adh.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.80e-30 | 19 |
placental epithelial cell | 1.10e-13 | 3 |
steroid hormone secreting cell | 1.75e-13 | 3 |
preadipocyte of the breast | 1.11e-12 | 3 |
cortical cell of adrenal gland | 7.79e-10 | 2 |
lining cell | 1.41e-09 | 58 |
barrier cell | 1.41e-09 | 58 |
preadipocyte | 3.80e-08 | 12 |
squamous epithelial cell | 2.74e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
placenta | 2.27e-10 | 4 |
allantois | 2.27e-10 | 4 |
adrenal gland | 8.26e-07 | 3 |
adrenal cortex | 8.26e-07 | 3 |
adrenal/interrenal gland | 8.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.80e-07 | 14 |