FFCP PHASE1:Hg19::chr22:39348723..39348754,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200315 | |EntrezGene=200315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17343 | |HGNC=17343 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000495988_5end | |association_with_transcript=0bp_to_ENST00000495988_5end | ||
|cluster_id=chr22:39348723..39348754,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_APOBEC3A_5end | |description=CAGE_peak_2_at_APOBEC3A_5end | ||
|id=chr22:39348723..39348754,+ | |id=chr22:39348723..39348754,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.90e-55!42;CL:0000860!2.33e-50!45;CL:0000766!1.06e-42!76;CL:0002194!9.04e-37!63;CL:0000576!9.04e-37!63;CL:0000040!9.04e-37!63;CL:0000559!9.04e-37!63;CL:0000738!1.21e-36!140;CL:0002009!3.81e-35!65;CL:0000839!5.11e-33!70;CL:0002087!6.35e-33!119;CL:0000557!7.87e-31!71;CL:0000037!2.75e-29!172;CL:0000566!2.75e-29!172;CL:0002031!5.33e-28!124;CL:0000763!1.61e-27!112;CL:0000049!1.61e-27!112;CL:0002032!4.08e-27!165;CL:0000837!4.08e-27!165;CL:0000988!2.57e-26!182;CL:0002393!1.14e-12!9;CL:0002397!1.14e-12!9;CL:0000094!1.67e-12!8;CL:0000081!1.71e-08!11 | |ontology_enrichment_celltype=CL:0002057!3.90e-55!42;CL:0000860!2.33e-50!45;CL:0000766!1.06e-42!76;CL:0002194!9.04e-37!63;CL:0000576!9.04e-37!63;CL:0000040!9.04e-37!63;CL:0000559!9.04e-37!63;CL:0000738!1.21e-36!140;CL:0002009!3.81e-35!65;CL:0000839!5.11e-33!70;CL:0002087!6.35e-33!119;CL:0000557!7.87e-31!71;CL:0000037!2.75e-29!172;CL:0000566!2.75e-29!172;CL:0002031!5.33e-28!124;CL:0000763!1.61e-27!112;CL:0000049!1.61e-27!112;CL:0002032!4.08e-27!165;CL:0000837!4.08e-27!165;CL:0000988!2.57e-26!182;CL:0002393!1.14e-12!9;CL:0002397!1.14e-12!9;CL:0000094!1.67e-12!8;CL:0000081!1.71e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.13e-66;33!CL:0002057;5.13e-66;33!CL:0000576;9.93e-49;48!CL:0000473;1.72e-45;39!CL:0000234;1.72e-45;39!CL:0000766;9.06e-35;69!CL:0000094;5.03e-20;8!CL:0000763;1.82e-16;100!CL:0002087;2.08e-16;104!CL:0000081;4.24e-14;11!CL:0002393;6.69e-14;6!CL:0002397;6.69e-14;6!CL:0000738;1.57e-11;136!CL:0000775;4.18e-09;3!CL:0000988;1.18e-08;177!CL:0000875;3.99e-08;3!CL:0002396;3.99e-08;3!CL:0000767;1.03e-07;3!CL:0000226;1.82e-07;3!CL:0000842;1.82e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.95e-92,42;CL:0002057,1.95e-92,42;CL:0000473,2.73e-79,48;CL:0000234,2.73e-79,48;CL:0000766,3.39e-72,72;CL:0002194,6.71e-61,59;CL:0000576,6.71e-61,59;CL:0000040,6.71e-61,59;CL:0000559,6.71e-61,59;CL:0002009,1.58e-58,61;CL:0000839,3.18e-53,66;CL:0000557,2.95e-52,67;CL:0000738,1.90e-50,136;CL:0000763,1.46e-47,108;CL:0000049,1.46e-47,108;CL:0002087,7.30e-44,115;CL:0000037,6.92e-41,168;CL:0002032,2.04e-38,161;CL:0000837,2.04e-38,161;CL:0000988,5.61e-38,177;CL:0002031,5.11e-36,120;CL:0002393,2.63e-20,9;CL:0002397,2.63e-20,9;CL:0000094,4.97e-20,8;CL:0000081,4.20e-14,11;CL:0000134,4.76e-11,354;CL:0002320,1.53e-10,361;CL:0000775,4.18e-09,3;CL:0000219,8.92e-09,386;CL:0000875,4.24e-08,3;CL:0002396,4.24e-08,3;CL:0000767,1.02e-07,3;CL:0000226,1.77e-07,3;CL:0000842,1.77e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-65;42!CL:0000049;1.14e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.16e-38!102;UBERON:0003061!1.16e-38!102;UBERON:0002193!6.57e-36!112;UBERON:0007023!7.00e-30!115;UBERON:0002371!1.34e-25!80;UBERON:0001474!9.61e-23!86;UBERON:0002405!2.14e-19!115;UBERON:0004765!6.58e-19!101;UBERON:0001434!6.58e-19!101;UBERON:0003081!1.53e-13!216;UBERON:0000178!1.98e-13!15;UBERON:0000179!1.98e-13!15;UBERON:0000463!1.98e-13!15;UBERON:0002204!1.80e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.60e-22;15!UBERON:0000179;1.60e-22;15!UBERON:0000463;1.60e-22;15!UBERON:0002390;1.39e-11;32!UBERON:0002193;4.09e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.37e-64,98;UBERON:0003061,2.37e-64,98;UBERON:0002193,2.62e-59,108;UBERON:0002371,1.09e-44,76;UBERON:0001474,1.45e-40,82;UBERON:0002405,3.58e-40,93;UBERON:0004765,6.44e-36,90;UBERON:0001434,3.73e-31,100;UBERON:0003081,2.76e-23,203;UBERON:0000178,1.57e-22,15;UBERON:0000179,1.57e-22,15;UBERON:0000463,1.57e-22,15;UBERON:0002204,4.21e-14,167;UBERON:0000926,1.56e-10,315;UBERON:0004120,1.56e-10,315;UBERON:0006603,1.56e-10,315;UBERON:0002384,2.04e-10,371 | |||
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|short_description=p2@APOBEC3A | |short_description=p2@APOBEC3A | ||
}} | }} |
Latest revision as of 17:23, 24 September 2015
Short description: | p2@APOBEC3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_APOBEC3A_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000495988_5end |
EntrezGene: | APOBEC3A |
HGNC: | 17343 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.37e-64 | 98 |
blood island | 2.37e-64 | 98 |
hemolymphoid system | 2.62e-59 | 108 |
bone marrow | 1.09e-44 | 76 |
bone element | 1.45e-40 | 82 |
immune system | 3.58e-40 | 93 |
skeletal element | 6.44e-36 | 90 |
skeletal system | 3.73e-31 | 100 |
lateral plate mesoderm | 2.76e-23 | 203 |
blood | 1.57e-22 | 15 |
haemolymphatic fluid | 1.57e-22 | 15 |
organism substance | 1.57e-22 | 15 |
musculoskeletal system | 4.21e-14 | 167 |
mesoderm | 1.56e-10 | 315 |
mesoderm-derived structure | 1.56e-10 | 315 |
presumptive mesoderm | 1.56e-10 | 315 |
connective tissue | 2.04e-10 | 371 |