FFCP PHASE1:Hg19::chr17:73401728..73401801,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2885 | |EntrezGene=2885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4566 | |HGNC=4566 | ||
|TSSclassifier=strong | |||
|UniProt=P62993,B0LPF3 | |UniProt=P62993,B0LPF3 | ||
|association_with_transcript=0bp_to_ENST00000316615,ENST00000316804,NM_002086,NM_203506,uc002jnx.3,uc002jny.3_5end | |association_with_transcript=0bp_to_ENST00000316615,ENST00000316804,NM_002086,NM_203506,uc002jnx.3,uc002jny.3_5end | ||
|cluster_id=chr17:73401728..73401801,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_GRB2_5end | |description=CAGE_peak_1_at_GRB2_5end | ||
|id=chr17:73401728..73401801,- | |id=chr17:73401728..73401801,- | ||
|ontology_enrichment_celltype=CL:0000037!3.12e-65!172;CL:0000566!3.12e-65!172;CL:0000988!5.42e-64!182;CL:0002032!4.53e-63!165;CL:0000837!4.53e-63!165;CL:0000738!1.38e-58!140;CL:0002087!4.99e-48!119;CL:0002031!5.39e-47!124;CL:0000763!1.66e-45!112;CL:0000049!1.66e-45!112;CL:0000766!1.01e-38!76;CL:0000557!7.71e-35!71;CL:0002009!2.53e-32!65;CL:0002194!1.61e-31!63;CL:0000576!1.61e-31!63;CL:0000040!1.61e-31!63;CL:0000559!1.61e-31!63;CL:0000839!5.37e-31!70;CL:0002057!1.97e-26!42;CL:0000860!2.01e-24!45;CL:0000542!8.47e-15!53;CL:0000051!8.47e-15!53;CL:0000838!1.58e-14!52;CL:0000134!1.50e-12!358;CL:0002320!3.36e-11!365;CL:0000945!3.09e-10!24;CL:0000826!3.09e-10!24;CL:0000219!5.73e-09!390;CL:0000236!3.53e-07!14 | |ontology_enrichment_celltype=CL:0000037!3.12e-65!172;CL:0000566!3.12e-65!172;CL:0000988!5.42e-64!182;CL:0002032!4.53e-63!165;CL:0000837!4.53e-63!165;CL:0000738!1.38e-58!140;CL:0002087!4.99e-48!119;CL:0002031!5.39e-47!124;CL:0000763!1.66e-45!112;CL:0000049!1.66e-45!112;CL:0000766!1.01e-38!76;CL:0000557!7.71e-35!71;CL:0002009!2.53e-32!65;CL:0002194!1.61e-31!63;CL:0000576!1.61e-31!63;CL:0000040!1.61e-31!63;CL:0000559!1.61e-31!63;CL:0000839!5.37e-31!70;CL:0002057!1.97e-26!42;CL:0000860!2.01e-24!45;CL:0000542!8.47e-15!53;CL:0000051!8.47e-15!53;CL:0000838!1.58e-14!52;CL:0000134!1.50e-12!358;CL:0002320!3.36e-11!365;CL:0000945!3.09e-10!24;CL:0000826!3.09e-10!24;CL:0000219!5.73e-09!390;CL:0000236!3.53e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000473;9.34e-20;39!CL:0000234;9.34e-20;39!CL:0000860;1.06e-19;33!CL:0002057;1.06e-19;33!CL:0000576;5.08e-19;48!CL:0000766;4.72e-17;69!CL:0000763;4.88e-14;100!CL:0002087;7.59e-14;104!CL:0000738;3.96e-13;136!CL:0000988;1.08e-11;177!CL:0000945;3.10e-10;24!CL:0000542;6.29e-09;53!CL:0000236;7.41e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.07e-66,168;CL:0000988,2.31e-65,177;CL:0002032,1.46e-64,161;CL:0000837,1.46e-64,161;CL:0000738,2.88e-60,136;CL:0002087,1.07e-49,115;CL:0002031,1.47e-48,120;CL:0000763,3.36e-47,108;CL:0000049,3.36e-47,108;CL:0000766,6.55e-41,72;CL:0000557,5.85e-37,67;CL:0002009,1.75e-34,61;CL:0002194,1.07e-33,59;CL:0000576,1.07e-33,59;CL:0000040,1.07e-33,59;CL:0000559,1.07e-33,59;CL:0000839,6.43e-33,66;CL:0000473,2.62e-30,48;CL:0000234,2.62e-30,48;CL:0000860,1.97e-26,42;CL:0002057,1.97e-26,42;CL:0000542,8.47e-15,53;CL:0000051,8.47e-15,53;CL:0000838,1.58e-14,52;CL:0000134,1.19e-12,354;CL:0002320,2.74e-11,361;CL:0000945,3.09e-10,24;CL:0000826,3.09e-10,24;CL:0000219,4.93e-09,386;CL:0000236,3.53e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;3.35e-19;42!CL:0000049;2.47e-13;108!CL:0000051;6.29e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!3.90e-10!51;DOID:0060083!3.90e-10!51;DOID:1240!1.00e-09!39;DOID:8692!1.85e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.92e-08;31!DOID:1240;9.34e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.90e-10,51;DOID:0060083,3.90e-10,51;DOID:1240,1.00e-09,39;DOID:8692,1.85e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.47e-40!102;UBERON:0003061!8.47e-40!102;UBERON:0002193!3.65e-37!112;UBERON:0002371!5.55e-31!80;UBERON:0001474!2.36e-28!86;UBERON:0002405!2.40e-28!115;UBERON:0004765!9.04e-19!101;UBERON:0001434!9.04e-19!101;UBERON:0003081!3.59e-16!216;UBERON:0002384!3.10e-10!375;UBERON:0000178!3.59e-07!15;UBERON:0000179!3.59e-07!15;UBERON:0000463!3.59e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!8.47e-40!102;UBERON:0003061!8.47e-40!102;UBERON:0002193!3.65e-37!112;UBERON:0002371!5.55e-31!80;UBERON:0001474!2.36e-28!86;UBERON:0002405!2.40e-28!115;UBERON:0004765!9.04e-19!101;UBERON:0001434!9.04e-19!101;UBERON:0003081!3.59e-16!216;UBERON:0002384!3.10e-10!375;UBERON:0000178!3.59e-07!15;UBERON:0000179!3.59e-07!15;UBERON:0000463!3.59e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.62e-07;15!UBERON:0000179;3.62e-07;15!UBERON:0000463;3.62e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.91e-41,98;UBERON:0003061,1.91e-41,98;UBERON:0002193,1.46e-38,108;UBERON:0002371,1.18e-32,76;UBERON:0002405,5.09e-32,93;UBERON:0001474,8.86e-30,82;UBERON:0004765,2.44e-22,90;UBERON:0001434,2.12e-17,100;UBERON:0003081,9.31e-16,203;UBERON:0002384,2.59e-10,371;UBERON:0000178,3.59e-07,15;UBERON:0000179,3.59e-07,15;UBERON:0000463,3.59e-07,15 | |||
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134.450894118806,136.88274621348 | ||
|short_description=p1@GRB2 | |short_description=p1@GRB2 | ||
}} | }} |
Latest revision as of 10:54, 17 September 2015
Short description: | p1@GRB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRB2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000316615, ENST00000316804, NM_002086, NM_203506, uc002jnx.3, uc002jny.3_5end |
EntrezGene: | GRB2 |
HGNC: | 4566 |
UniProt: | P62993B0LPF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.91e-41 | 98 |
blood island | 1.91e-41 | 98 |
hemolymphoid system | 1.46e-38 | 108 |
bone marrow | 1.18e-32 | 76 |
immune system | 5.09e-32 | 93 |
bone element | 8.86e-30 | 82 |
skeletal element | 2.44e-22 | 90 |
skeletal system | 2.12e-17 | 100 |
lateral plate mesoderm | 9.31e-16 | 203 |
connective tissue | 2.59e-10 | 371 |
blood | 3.59e-07 | 15 |
haemolymphatic fluid | 3.59e-07 | 15 |
organism substance | 3.59e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.90e-10 | 51 |
immune system cancer | 3.90e-10 | 51 |
leukemia | 1.00e-09 | 39 |
myeloid leukemia | 1.85e-08 | 31 |