FFCP PHASE1:Hg19::chr17:74724316..74724318,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:74724316..74724318,- | |||
|description=CAGE_peak_at_chr17:74724316..74724318,- | |description=CAGE_peak_at_chr17:74724316..74724318,- | ||
|id=chr17:74724316..74724318,- | |id=chr17:74724316..74724318,- | ||
|ontology_enrichment_celltype=CL:0000838!2.38e-09!52;CL:0000542!4.82e-09!53;CL:0000051!4.82e-09!53 | |ontology_enrichment_celltype=CL:0000838!2.38e-09!52;CL:0000542!4.82e-09!53;CL:0000051!4.82e-09!53 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.40e-14;1!CL:0000817;1.40e-14;1!CL:0000911;1.40e-14;1!CL:0000814;1.40e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,9.36e-15,1;CL:0000914,9.36e-15,1;CL:0000911,9.36e-15,1;CL:0000814,9.36e-15,1;CL:0002042,9.36e-15,1;CL:0002039,9.36e-15,1;CL:0002040,9.36e-15,1;CL:0002041,9.36e-15,1;CL:0000893,5.02e-08,2;CL:0002489,5.02e-08,2;CL:0000809,5.02e-08,2;CL:0000808,5.02e-08,2;CL:0000894,5.02e-08,2;CL:0000806,5.02e-08,2;CL:0000807,5.02e-08,2;CL:0000805,5.02e-08,2;CL:0002425,5.02e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.40e-14;1!CL:0002425;6.14e-08;2 | |||
|ontology_enrichment_disease=DOID:14566!8.97e-37!239;DOID:162!2.17e-36!235;DOID:0050687!1.04e-24!143;DOID:305!8.42e-20!106;DOID:0050686!7.36e-19!137;DOID:1749!9.85e-16!14;DOID:2531!9.89e-08!51;DOID:0060083!9.89e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.40e-14;1!DOID:10165;1.40e-14;1!DOID:1798;1.40e-14;1!DOID:9119;1.40e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,1.61e-14,1;DOID:1799,1.84e-14,1;DOID:10165,1.84e-14,1;DOID:1798,1.84e-14,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.40e-14;1!UBERON:0001785;1.40e-14;1!UBERON:0002464;1.40e-14;1!UBERON:0004904;1.40e-14;1!UBERON:0001021;1.40e-14;1!UBERON:0003714;6.14e-08;2!UBERON:0005162;6.14e-08;2!UBERON:0000122;6.14e-08;2!UBERON:0000010;6.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.07e-14,1;UBERON:0001785,1.07e-14,1;UBERON:0002464,1.07e-14,1;UBERON:0004904,1.07e-14,1;UBERON:0001021,1.07e-14,1;UBERON:0003902,1.07e-14,1;UBERON:0005425,1.07e-14,1;UBERON:0003714,5.37e-08,2;UBERON:0005162,5.37e-08,2;UBERON:0000122,5.37e-08,2;UBERON:0000010,6.41e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0.232401601740905,0.284338464974843,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56919201590938,0.197030760201927,0.862510299438069,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,1.15415370381156,0.284567373393656,0.159426272728822,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,1.35433422241283,0,0,0,0,0,0,0,0.19538809540204,0,0,0,1.33228787199128,0,0,0,0,0.222886768554957,0,0.71623345421307,0,0,0,0,0.445234820091624,0,1.68900326502395,0,0,0.503865495708552,0,0.492339221844278,0,0.449341755736634,1.25314822272926,0,0,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.583209226766509,0,0,0,0,0,0.295547618953547,0,0.653630781113941,0.697118721393016,0,0.113942055847001,0.23056390438806,0.0897576444097721,0,0.638002319463839,0,0,0,0,0,0,0,0,0.37950746544837,0.158936578980379,0,0.326465616318295,0.141353071433941,0.432777279484182,0,0,0,0,0,0,0,0,0,0.547364367646998,0.978323094660449,0.485560759068186,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0,0,0,0,0,0.489961987071888,0.174118413160805,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0.411125773940253,0.19871461170299,0,0,0.0801588202515337,0,0,0.144090417154106,0.229073192331831,0,0.720273989940749,0,0.235694034616795,0.407712618220842,0,0,0.288950589901519,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.295282444544246,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0.121792598380896,0.638341257770182,1.08803560673895,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0,1.38348634936231,0.249960815924213,0.606596470166591,0.570930667089935,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.920529751259204,0,0,0.383683113910955,0.323474434190045,0,2.07498312564826,0,0.637724760305049,0.495743057036009,0,0,0.23658523500376,0,0,0,0,0,0.159633859057151,0,0,0,0,1.42769420259154,0.0981477185010256,0.589848616738702,0.183428598521679,0.577628330751691,0,0.690359926060101,0.596748666348824,0,0.20170506870352,0,1.30953347240711,0.163771917510097,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0.472775363535873,0.222462803784138,0,0,0.840816489941367,0,0,0,0,0.158013611732727,0.116241425368125,0.173858272302579,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0.111855431797792,0.196300467230486,0,0,0,0,0,0,0.795803100645473,0,1.58124514854544,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0.357107877211315,0.705789743431384,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0.101988829741982,0.26721740526556,0,0.250707539292375,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.569822880276821,0.213454691755431,0,0.269475606319761,0,0,0,0,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0.232401601740905,0.284338464974843,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56919201590938,0.197030760201927,0.862510299438069,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,1.15415370381156,0.284567373393656,0.159426272728822,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,1.35433422241283,0,0,0,0,0,0,0,0.19538809540204,0,0,0,1.33228787199128,0,0,0,0,0.222886768554957,0,0.71623345421307,0,0,0,0,0.445234820091624,0,1.68900326502395,0,0,0.503865495708552,0,0.492339221844278,0,0.449341755736634,1.25314822272926,0,0,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.583209226766509,0,0,0,0,0,0.295547618953547,0,0.653630781113941,0.697118721393016,0,0.113942055847001,0.23056390438806,0.0897576444097721,0,0.638002319463839,0,0,0,0,0,0,0,0,0.37950746544837,0.158936578980379,0,0.326465616318295,0.141353071433941,0.432777279484182,0,0,0,0,0,0,0,0,0,0.547364367646998,0.978323094660449,0.485560759068186,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0,0,0,0,0,0.489961987071888,0.174118413160805,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0.411125773940253,0.19871461170299,0,0,0.0801588202515337,0,0,0.144090417154106,0.229073192331831,0,0.720273989940749,0,0.235694034616795,0.407712618220842,0,0,0.288950589901519,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.295282444544246,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0.121792598380896,0.638341257770182,1.08803560673895,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0,1.38348634936231,0.249960815924213,0.606596470166591,0.570930667089935,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.920529751259204,0,0,0.383683113910955,0.323474434190045,0,2.07498312564826,0,0.637724760305049,0.495743057036009,0,0,0.23658523500376,0,0,0,0,0,0.159633859057151,0,0,0,0,1.42769420259154,0.0981477185010256,0.589848616738702,0.183428598521679,0.577628330751691,0,0.690359926060101,0.596748666348824,0,0.20170506870352,0,1.30953347240711,0.163771917510097,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0.472775363535873,0.222462803784138,0,0,0.840816489941367,0,0,0,0,0.158013611732727,0.116241425368125,0.173858272302579,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0.111855431797792,0.196300467230486,0,0,0,0,0,0,0.795803100645473,0,1.58124514854544,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0.357107877211315,0.705789743431384,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0.101988829741982,0.26721740526556,0,0.250707539292375,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.569822880276821,0.213454691755431,0,0.269475606319761,0,0,0,0,0,0.641136984606466 | ||
|short_description=p@chr17:74724316..74724318,- | |short_description=p@chr17:74724316..74724318,- | ||
}} | }} |
Latest revision as of 21:34, 25 July 2015
Short description: | p@chr17:74724316..74724318, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:74724316..74724318, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 9.36e-15 | 1 |
immature NK T cell | 9.36e-15 | 1 |
effector T cell | 9.36e-15 | 1 |
mature NK T cell | 9.36e-15 | 1 |
immature NK T cell stage IV | 9.36e-15 | 1 |
immature NK T cell stage I | 9.36e-15 | 1 |
immature NK T cell stage II | 9.36e-15 | 1 |
immature NK T cell stage III | 9.36e-15 | 1 |
thymocyte | 5.02e-08 | 2 |
double negative thymocyte | 5.02e-08 | 2 |
double-positive, alpha-beta thymocyte | 5.02e-08 | 2 |
DN4 thymocyte | 5.02e-08 | 2 |
DN1 thymic pro-T cell | 5.02e-08 | 2 |
DN2 thymocyte | 5.02e-08 | 2 |
DN3 thymocyte | 5.02e-08 | 2 |
immature single positive thymocyte | 5.02e-08 | 2 |
early T lineage precursor | 5.02e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.07e-14 | 1 |
cranial nerve | 1.07e-14 | 1 |
nerve trunk | 1.07e-14 | 1 |
nerve connecting eye with brain | 1.07e-14 | 1 |
nerve | 1.07e-14 | 1 |
retinal neural layer | 1.07e-14 | 1 |
presumptive neural retina | 1.07e-14 | 1 |
neural tissue | 5.37e-08 | 2 |
multi cell component structure | 5.37e-08 | 2 |
neuron projection bundle | 5.37e-08 | 2 |
peripheral nervous system | 6.41e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.61e-14 | 1 |
islet cell tumor | 1.84e-14 | 1 |
endocrine pancreas cancer | 1.84e-14 | 1 |
pancreatic endocrine carcinoma | 1.84e-14 | 1 |