FFCP PHASE1:Hg19::chr17:8620771..8620777,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:8620771..8620777,- | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_at_chr17:8620771..8620777,- | |description=CAGE_peak_at_chr17:8620771..8620777,- | ||
|id=chr17:8620771..8620777,- | |id=chr17:8620771..8620777,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;4.39e-17;7!CL:0000586;4.39e-17;7!CL:0002127;8.57e-14;1!CL:0000911;8.57e-14;1!CL:0000814;8.57e-14;1!CL:0002097;1.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.39e-17,7;CL:0000586,4.39e-17,7;CL:0002127,8.58e-14,1;CL:0000914,8.58e-14,1;CL:0000911,8.58e-14,1;CL:0000814,8.58e-14,1;CL:0002042,8.58e-14,1;CL:0002039,8.58e-14,1;CL:0002040,8.58e-14,1;CL:0002041,8.58e-14,1;CL:0000893,1.54e-07,2;CL:0002489,1.54e-07,2;CL:0000809,1.54e-07,2;CL:0000808,1.54e-07,2;CL:0000894,1.54e-07,2;CL:0000806,1.54e-07,2;CL:0000807,1.54e-07,2;CL:0000805,1.54e-07,2;CL:0002425,1.54e-07,2;CL:0002097,2.25e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002425;1.54e-07;2 | |||
|ontology_enrichment_disease=DOID:162!1.37e-14!235;DOID:14566!5.15e-14!239;DOID:0050687!5.84e-09!143;DOID:1749!3.41e-08!14;DOID:305!1.24e-07!106 | |ontology_enrichment_disease=DOID:162!1.37e-14!235;DOID:14566!5.15e-14!239;DOID:0050687!5.84e-09!143;DOID:1749!3.41e-08!14;DOID:305!1.24e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:6193;6.65e-14;1!DOID:1799;1.42e-13;1!DOID:10165;1.42e-13;1!DOID:1798;1.42e-13;1!DOID:170;4.20e-09;6!DOID:3350;1.36e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,7.55e-14,1;DOID:1799,1.25e-13,1;DOID:10165,1.25e-13,1;DOID:1798,1.25e-13,1;DOID:170,4.37e-09,6;DOID:3350,1.45e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.34e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.24e-07,8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,1.83370705696798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4658731678576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,1.71752672377882,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,1.22587722705226,0,0.47748896947538,0,0.307160702099232,0,0,0.111308705022906,0,0.63337622438398,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,16.6006011159403,37.428937718875,31.0731483696943,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0.635746315921515,0,0.489698424477443,0,0,0,0,0,1.18608451472249,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,14.2807248443768,0.207376382794494,0,0,0,0,0,0,0,0,0,0.17472666824203,3.0957485844891,0.19351266257817,0,0,0,0,0,0,0.19871461170299,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0.828478110694391,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,10.2789415892716,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,1.06172751012966,0,0,0,0,0,0,0,0,1.30953347240711,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.230467975111559,0,0,0,0.236387681767936,0,0,0,0.560544326627578,0,0,0,0,0.316027223465453,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,3.18270532516606,3.48353369203032,0,0,0,0,0,0.0620747142958579,0.448527450322454,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:8620771..8620777,- | |short_description=p@chr17:8620771..8620777,- | ||
}} | }} |
Latest revision as of 23:23, 25 July 2015
Short description: | p@chr17:8620771..8620777, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:8620771..8620777, - |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.39e-17 | 7 |
germ cell | 4.39e-17 | 7 |
innate effector T cell | 8.58e-14 | 1 |
immature NK T cell | 8.58e-14 | 1 |
effector T cell | 8.58e-14 | 1 |
mature NK T cell | 8.58e-14 | 1 |
immature NK T cell stage IV | 8.58e-14 | 1 |
immature NK T cell stage I | 8.58e-14 | 1 |
immature NK T cell stage II | 8.58e-14 | 1 |
immature NK T cell stage III | 8.58e-14 | 1 |
thymocyte | 1.54e-07 | 2 |
double negative thymocyte | 1.54e-07 | 2 |
double-positive, alpha-beta thymocyte | 1.54e-07 | 2 |
DN4 thymocyte | 1.54e-07 | 2 |
DN1 thymic pro-T cell | 1.54e-07 | 2 |
DN2 thymocyte | 1.54e-07 | 2 |
DN3 thymocyte | 1.54e-07 | 2 |
immature single positive thymocyte | 1.54e-07 | 2 |
early T lineage precursor | 1.54e-07 | 2 |
cortical cell of adrenal gland | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 3.24e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 7.55e-14 | 1 |
islet cell tumor | 1.25e-13 | 1 |
endocrine pancreas cancer | 1.25e-13 | 1 |
pancreatic endocrine carcinoma | 1.25e-13 | 1 |
endocrine gland cancer | 4.37e-09 | 6 |
mesenchymal cell neoplasm | 1.45e-07 | 2 |