FFCP PHASE1:Hg19::chr2:216284007..216284022,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:216284007..216284022,+ | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_at_chr2:216284007..216284022,+ | |description=CAGE_peak_at_chr2:216284007..216284022,+ | ||
|id=chr2:216284007..216284022,+ | |id=chr2:216284007..216284022,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.25e-30!180;CL:0000057!3.15e-25!75;CL:0002371!1.23e-22!591;CL:0000144!1.30e-20!625;CL:0000548!2.82e-16!679;CL:0000004!2.82e-16!679;CL:0000255!2.82e-16!679;CL:0000012!8.83e-16!682;CL:0000048!1.01e-13!430;CL:0000723!2.10e-13!436;CL:0000034!2.13e-12!444;CL:0000183!1.08e-11!59;CL:0000680!1.67e-11!57;CL:0000056!1.67e-11!57;CL:0000355!1.67e-11!57;CL:0002620!7.79e-11!23;CL:0000187!2.78e-10!54;CL:0000003!4.82e-10!722;CL:0000393!7.80e-09!60;CL:0000211!7.80e-09!60;CL:0002334!1.31e-08!12;CL:0000220!2.80e-08!246;CL:0002321!5.65e-08!248;CL:0002320!1.37e-07!365;CL:0000222!3.66e-07!119;CL:0000192!6.63e-07!42;CL:0000514!6.63e-07!42 | |ontology_enrichment_celltype=CL:0000055!2.25e-30!180;CL:0000057!3.15e-25!75;CL:0002371!1.23e-22!591;CL:0000144!1.30e-20!625;CL:0000548!2.82e-16!679;CL:0000004!2.82e-16!679;CL:0000255!2.82e-16!679;CL:0000012!8.83e-16!682;CL:0000048!1.01e-13!430;CL:0000723!2.10e-13!436;CL:0000034!2.13e-12!444;CL:0000183!1.08e-11!59;CL:0000680!1.67e-11!57;CL:0000056!1.67e-11!57;CL:0000355!1.67e-11!57;CL:0002620!7.79e-11!23;CL:0000187!2.78e-10!54;CL:0000003!4.82e-10!722;CL:0000393!7.80e-09!60;CL:0000211!7.80e-09!60;CL:0002334!1.31e-08!12;CL:0000220!2.80e-08!246;CL:0002321!5.65e-08!248;CL:0002320!1.37e-07!365;CL:0000222!3.66e-07!119;CL:0000192!6.63e-07!42;CL:0000514!6.63e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.92e-14;55!CL:0000723;7.31e-13;61!CL:0000349;2.05e-12;19!CL:0000048;1.13e-11;58!CL:0000034;2.48e-10;69!CL:0002620;3.14e-10;23!CL:0002334;2.32e-09;12!CL:0000057;3.26e-09;73!CL:0002320;2.61e-08;188!CL:0002494;6.19e-07;16!CL:0002548;6.50e-07;6!CL:0002570;6.63e-07;8!CL:0002569;9.59e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.62e-25,76;CL:0000048,2.28e-17,427;CL:0000723,1.30e-16,433;CL:0000034,1.21e-15,441;CL:0002320,9.29e-15,361;CL:0000349,3.91e-12,19;CL:0000134,5.33e-12,354;CL:0002620,2.33e-10,23;CL:0000219,8.20e-10,386;CL:0002334,2.13e-09,12;CL:0002570,7.69e-07,8;CL:0002494,7.75e-07,16;CL:0002569,7.87e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.92e-15!83;UBERON:0002329!1.92e-15!83;UBERON:0003077!1.92e-15!83;UBERON:0003059!1.92e-15!83;UBERON:0007282!1.92e-15!83;UBERON:0009618!1.92e-15!83;UBERON:0007285!1.92e-15!83;UBERON:0004290!1.87e-13!70;UBERON:0000486!2.70e-13!82;UBERON:0005256!4.76e-13!143;UBERON:0002199!4.28e-10!45;UBERON:0002416!4.28e-10!45;UBERON:0001134!8.58e-10!61;UBERON:0002036!8.58e-10!61;UBERON:0003082!8.58e-10!61;UBERON:0002385!1.36e-09!63;UBERON:0001015!1.36e-09!63;UBERON:0000383!1.36e-09!63;UBERON:0002097!1.96e-09!40;UBERON:0003102!5.04e-09!95;UBERON:0000478!6.13e-09!24;UBERON:0004923!8.00e-09!57;UBERON:0003914!9.60e-09!118;UBERON:0004872!1.90e-08!84;UBERON:0002100!1.59e-07!216;UBERON:0001637!1.96e-07!42;UBERON:0003509!1.96e-07!42;UBERON:0004572!1.96e-07!42;UBERON:0002384!1.98e-07!375;UBERON:0005631!2.18e-07!14;UBERON:0000158!2.18e-07!14;UBERON:0000490!2.88e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;3.34e-10;24!UBERON:0002384;7.14e-09;198!UBERON:0004457;2.43e-08;9!UBERON:0000042;2.43e-08;9!UBERON:0002199;3.24e-08;46!UBERON:0002416;3.24e-08;46!UBERON:0003104;7.09e-08;7!UBERON:0009142;7.09e-08;7!UBERON:0002097;7.63e-08;41!UBERON:0003688;1.76e-07;6!UBERON:0002358;1.76e-07;6!UBERON:0003684;1.76e-07;6!UBERON:0001178;1.76e-07;6!UBERON:0001013;3.57e-07;14!UBERON:0004905;8.64e-07;8!UBERON:0000982;8.64e-07;8!UBERON:0004770;8.64e-07;8!UBERON:0003102;8.71e-07;50!UBERON:0003422;9.59e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.89e-15,371;UBERON:0002199,1.73e-11,46;UBERON:0002416,1.73e-11,46;UBERON:0002097,4.57e-10,41;UBERON:0000478,5.56e-10,24;UBERON:0000926,1.73e-09,315;UBERON:0004120,1.73e-09,315;UBERON:0006603,1.73e-09,315;UBERON:0007524,1.16e-08,73;UBERON:0007503,1.61e-08,78;UBERON:0002329,2.60e-08,71;UBERON:0003059,2.60e-08,71;UBERON:0007282,2.60e-08,71;UBERON:0004290,2.60e-08,71;UBERON:0009618,2.60e-08,71;UBERON:0004923,3.97e-08,66;UBERON:0003077,4.45e-08,72;UBERON:0007285,4.45e-08,72;UBERON:0000486,7.25e-08,83;UBERON:0003688,1.51e-07,6;UBERON:0002358,1.51e-07,6;UBERON:0003684,1.51e-07,6;UBERON:0001178,1.51e-07,6;UBERON:0001013,3.94e-07,14;UBERON:0003422,7.87e-07,6 | |||
|phase1_expression=3.45188920614058,4.28201047781966,1.83240725324762,11.0080628188443,3.12872766099101,7.85104671690332,5.06599756336621,0,0,0,0,1.09220686065086,1.31883489114227,1.11389717664042,3.31397375727916,2.01697543935533,3.61616716814386,2.19093027116212,1.95173119516203,0.246242116153576,0.612002073732759,0.940364164434263,0.572471974262113,0,1.25542639594803,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,1.66221330396589,1.80719576192283,0.50133791063589,1.44846518960824,0,21.8985691636186,0.189069634328136,0.443458794925128,0.702678285545008,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,1.67799774483962,1.6507082516404,0,0.516833518338658,0,0,0,0,0.488124115096339,0.367663080345869,2.43042584364528,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,5.4666914686485,2.27934920996244,9.53346101855175,19.7917268316681,2.4826786753885,1.12135520028461,1.06748995729705,5.42668606517752,2.17847724779836,3.50247747381189,3.59616186849609,1.51357427644931,5.18558332031999,0.234321431833797,4.37024107562449,0.570471821544449,5.67904986096844,1.64408298101271,1.45685649931318,0.702254033511242,0,0.737005903870608,0.309977343527296,1.18800285728205,0.247266929278557,0,1.43723628363248,0.505008341862199,0.875829639103749,0,0.438977620880838,3.37136575378922,1.20190447125277,2.1552114800404,12.1984952268426,1.49490172172997,4.23863802319124,7.20218630602566,0.92747276314595,9.79034052173391,1.8611685633159,4.05063197379039,1.36411807225678,17.670364197088,2.20919756741518,0.80823028409406,9.9402685904652,0.705264687593482,1.3564847384839,0.386521706326594,0.545492241181669,0,0,0,0.116193942869518,0,0,0,1.56449532329816,5.78916844373597,1.38134921352481,6.96551892047969,10.1063127433742,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,1.26755034821831,0,0,0,0.245976877086227,0.343135620597051,0.658501712451753,0,0,0.185176890317059,0.325808305310325,3.11980435583874,1.44331342025273,0,1.05667824812239,0.144366447761074,0,0.761016608938393,0,0,0,0,0.148631162288728,0,0.839910640994298,0.141775097242386,2.23896306757121,1.45316969256981,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.514137463516618,0.300343057843917,0.285826432630578,0.112131084345361,0.43596006883328,0.22001485746285,1.55126058909333,3.57656445851882,1.690605505112,1.32969058292435,3.12022310734098,0.514414748524284,2.83698264046557,2.66422179016099,1.14382394926518,1.08524321078289,2.46972101034231,0.325736184293735,0,3.95975936466715,0.602878754119172,0,0.099972991182057,0,0,2.10833939483032,2.87549826589899,5.7430967917057,0,1.59259437334337,3.6985738059069,0.895304816199478,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.34960640891054,4.00136416847742,2.71265023699736,8.31883446123229,6.78030157429215,3.46945313074656,1.99140405487612,0.300946099727719,0,2.0694614258501,3.98535359121262,1.29058417979192,1.21637060255316,1.17480694477644,2.40200396667599,0,0,0,0.303127571446259,3.32870879020994,2.11673205330776,6.4508030032882,9.97502826372406,7.85848264412606,2.43464383585832,3.58195074346692,3.05622450172854,1.48418066444991,2.15893571323718,5.50441348470694,0.9033987161519,0.519254429183621,2.90525946149898,0.846016147141356,2.6065841139427,0,0.34444334449382,1.0925470080403,0.655622074797121,0,0.15403067420883,0,2.92278449306521,0,1.13733384070897,0.170093705276516,0.647747748306418,1.54227252690289,0.541892875087706,1.00337954770971,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,1.95018073810956,0,1.06337790121334,2.92692372517824,2.30255512089194,1.7918754422989,4.40423003959922,3.91545073568417,1.36362603865761,0.890320356467374,1.15699440752685,1.15314040419064,0,0.10115778085555,0,17.9443037693465,0,0.308033580176089,0.532306030317022,0.869932992075073,0.18532421910392,0,0.744316738719335,0.632758849437452,1.14378116354295,0,0.42793898803392,0.636406495851874,2.35484592059769,0.539617372749944,1.37268514868027,0.471249609382746,0.808729926293264,0,0,0,1.70599442741899,2.11300293513511,0.9554993798559,0.424216295861138,3.39024349860728,0,2.65375590096488,0,0.578775534266688,1.9676842561399,0.202910376962704,0.30982349809975,0.845086807596724,1.29070216983646,2.06322986127554,0.35667105148125,0,2.53329162357197,10.8667314676768,0,0.699869440489966,0,0,0,0.376575203107117,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,3.10367830158997,0.593929361665277,0.307160702099232,0,0,5.89936136621401,0,0,0.796991953004279,0,0,0,0,3.42143546427988,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91153644677601,0,0,0,10.2080371114214,1.28236630762607,24.5195996968572,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.39458440284939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| ||
|short_description=p@chr2:216284007..216284022,+ | |short_description=p@chr2:216284007..216284022,+ | ||
}} | }} |
Latest revision as of 06:13, 29 July 2015
Short description: | p@chr2:216284007..216284022, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216284007..216284022, + |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.62e-25 | 76 |
multi fate stem cell | 2.28e-17 | 427 |
somatic stem cell | 1.30e-16 | 433 |
stem cell | 1.21e-15 | 441 |
connective tissue cell | 9.29e-15 | 361 |
extraembryonic cell | 3.91e-12 | 19 |
mesenchymal cell | 5.33e-12 | 354 |
skin fibroblast | 2.33e-10 | 23 |
motile cell | 8.20e-10 | 386 |
preadipocyte | 2.13e-09 | 12 |
mesenchymal stem cell of adipose | 7.69e-07 | 8 |
cardiocyte | 7.75e-07 | 16 |
mesenchymal stem cell of umbilical cord | 7.87e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.89e-15 | 371 |
integument | 1.73e-11 | 46 |
integumental system | 1.73e-11 | 46 |
skin of body | 4.57e-10 | 41 |
extraembryonic structure | 5.56e-10 | 24 |
mesoderm | 1.73e-09 | 315 |
mesoderm-derived structure | 1.73e-09 | 315 |
presumptive mesoderm | 1.73e-09 | 315 |
dense mesenchyme tissue | 1.16e-08 | 73 |
epithelial vesicle | 1.61e-08 | 78 |
somite | 2.60e-08 | 71 |
presomitic mesoderm | 2.60e-08 | 71 |
presumptive segmental plate | 2.60e-08 | 71 |
dermomyotome | 2.60e-08 | 71 |
trunk paraxial mesoderm | 2.60e-08 | 71 |
organ component layer | 3.97e-08 | 66 |
paraxial mesoderm | 4.45e-08 | 72 |
presumptive paraxial mesoderm | 4.45e-08 | 72 |
multilaminar epithelium | 7.25e-08 | 83 |
omentum | 1.51e-07 | 6 |
peritoneum | 1.51e-07 | 6 |
abdominal cavity | 1.51e-07 | 6 |
visceral peritoneum | 1.51e-07 | 6 |
adipose tissue | 3.94e-07 | 14 |
mesenchyme of umbilical cord | 7.87e-07 | 6 |