FFCP PHASE1:Hg19::chr2:27938593..27938615,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B7WNW1 | |UniProt=B7WNW1 | ||
|association_with_transcript=0bp_to_ENST00000379677,uc002rll.1_5end | |association_with_transcript=0bp_to_ENST00000379677,uc002rll.1_5end | ||
|cluster_id=chr2:27938593..27938615,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_1_at_ENST00000379677_5end,CAGE_peak_1_at_uc002rll.1_5end | |description=CAGE_peak_1_at_ENST00000379677_5end,CAGE_peak_1_at_uc002rll.1_5end | ||
|id=chr2:27938593..27938615,- | |id=chr2:27938593..27938615,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;1.61e-14;1!CL:1000746;1.78e-08;7!CL:1000612;1.78e-08;7!CL:0000650;6.57e-08;2!CL:1000500;6.57e-08;2!CL:1000618;6.57e-08;2!CL:1001318;6.57e-08;2!CL:0002173;6.57e-08;2!CL:0002600;6.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.41e-14,1;CL:1000746,2.07e-08,7;CL:1000612,2.07e-08,7;CL:0002600,7.52e-08,2;CL:0000650,9.19e-08,2;CL:1000500,9.19e-08,2;CL:1000618,9.19e-08,2;CL:1001318,9.19e-08,2;CL:0002173,9.19e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008814;6.57e-08;2!UBERON:0010056;6.57e-08;2 | |||
|ontology_enrichment_disease=DOID:0050687!2.82e-07!143;DOID:305!4.50e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3910;4.23e-08;2!DOID:4468;6.57e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,4.09e-08,2;DOID:4468,4.69e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.78e-08;7!UBERON:0001229;1.78e-08;7!UBERON:0004903;4.23e-08;2!UBERON:0002173;4.23e-08;2!UBERON:0002186;4.23e-08;2!UBERON:0002370;6.57e-08;2!UBERON:0000078;6.57e-08;2!UBERON:0003567;6.57e-08;2!UBERON:0005058;6.57e-08;2!UBERON:0003838;6.57e-08;2!UBERON:0003586;6.57e-08;2!UBERON:0005169;6.57e-08;2!UBERON:0002321;6.57e-08;2!UBERON:0002012;6.57e-08;2!UBERON:0005215;6.57e-08;2!UBERON:0002303;6.57e-08;2!UBERON:0008886;6.57e-08;2!UBERON:0002319;6.57e-08;2!UBERON:0009113;6.57e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001042,2.05e-12,10;UBERON:0009145,2.05e-12,10;UBERON:0006562,2.43e-11,11;UBERON:0003351,1.32e-09,6;UBERON:0010532,2.07e-08,7;UBERON:0000074,2.07e-08,7;UBERON:0001229,2.07e-08,7;UBERON:0001230,2.07e-08,7;UBERON:0003220,2.07e-08,7;UBERON:0005749,2.07e-08,7;UBERON:0004199,2.07e-08,7;UBERON:0004209,2.07e-08,7;UBERON:0004198,2.07e-08,7;UBERON:0004903,4.09e-08,2;UBERON:0002173,4.09e-08,2;UBERON:0002186,4.09e-08,2;UBERON:0000078,8.04e-08,2;UBERON:0007497,8.04e-08,2;UBERON:0003643,8.04e-08,2;UBERON:0003504,8.04e-08,2;UBERON:0003469,8.04e-08,2;UBERON:0003496,8.04e-08,2;UBERON:0002012,8.04e-08,2;UBERON:0008886,8.04e-08,2;UBERON:0007303,8.04e-08,2;UBERON:0002061,8.04e-08,2;UBERON:0005432,8.04e-08,2;UBERON:0004363,8.04e-08,2;UBERON:0003567,9.19e-08,2;UBERON:0003838,9.19e-08,2;UBERON:0003586,9.19e-08,2;UBERON:0005169,9.19e-08,2;UBERON:0002321,9.19e-08,2;UBERON:0005215,9.19e-08,2;UBERON:0002303,9.19e-08,2;UBERON:0002319,9.19e-08,2;UBERON:0005103,1.82e-07,8;UBERON:0000083,1.82e-07,8;UBERON:0009201,1.82e-07,8;UBERON:0006553,1.82e-07,8;UBERON:0003074,1.82e-07,8;UBERON:0003060,1.82e-07,8;UBERON:0008814,3.86e-07,18;UBERON:0000072,5.57e-07,47;UBERON:0000058,7.64e-07,19;UBERON:0001557,8.63e-07,19;UBERON:0000080,9.93e-07,9;UBERON:0002120,9.93e-07,9;UBERON:0004875,9.93e-07,9;UBERON:0005721,9.93e-07,9;UBERON:0005754,9.93e-07,9;UBERON:0007297,9.93e-07,9 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0,0.286235987131057,0.684372125364421,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0.822335776043652,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.468642863667593,0,0,0,0.352303495931295,0.323745888736263,0,0,0.245668634623536,0,0,0,0.910161361938026,0,0,0.500474079487857,0.277064115484183,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0.829288440122964,0,0.36497735907583,0,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.245976877086227,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,0.200506470303285,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0.541892875087706,1.00337954770971,0,0,0.895499018888713,0,0,0,0,0,0,0,0,0,0,0,0,0.616194468458578,0.307007349452259,0.275673144969061,0,0.290033387828457,0.340906509664404,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.272999822815972,0,1.13008116620243,0,0,0,1.15755106853338,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58913193817589,0,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,2.54253650292766,0,0,0,0.173624994933292,0.885741385813839,0,0,0.442317039724898,0.591095237907095,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,1.89898258075224,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0.242780379534093,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0.277349346026277,0,0,0,0,0.343972064943233,0.290268993867255,0.146178634172371,0.246346371159628,0,0,0,0,0.19871461170299,0,0.195551382734803,0.881747022766871,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0.959575986597226,0.714695326373367,0,0.76280561296425,0,0,0.326587360109409,0,0,0.170388021785422,0.113312091520126,0,0,0,0.26446520348538,0.171086837884329,0.704815022316672,0.213574825135389,0,0,0.496166021811951,0,0,0.638341257770182,0.544017803369474,0,0,0,0,0,0.366078794705889,0.1251909307065,0.573409195690071,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0.300515217994437,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.639471856518258,9.16510896871795,0.314531883711793,0.327628914576042,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.471878893390961,0,1.5018336599544,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0.0634158101939068,0,0,0,0,0.894336993477167,0,0,0,0,0,0.115233987555779,0.171488009437418,0.271878931907327,0,0.590969204419841,0.111231401892069,0,0.157115589916002,0,0,0.215927591218621,0,0.142953088353313,0,0.23248285073625,0,0,0,0,0,0,0,0,0.846774100381858,2.52017555398455,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,1.19370465096821,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0.633492505057185,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,1.11734485732544,0,0,0,0,0,0.202056159043763,0.143444410785353,0,0.325613074443898,0.106727345877715,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0,0.286235987131057,0.684372125364421,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0.822335776043652,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.468642863667593,0,0,0,0.352303495931295,0.323745888736263,0,0,0.245668634623536,0,0,0,0.910161361938026,0,0,0.500474079487857,0.277064115484183,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0.829288440122964,0,0.36497735907583,0,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.245976877086227,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,0.200506470303285,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0.541892875087706,1.00337954770971,0,0,0.895499018888713,0,0,0,0,0,0,0,0,0,0,0,0,0.616194468458578,0.307007349452259,0.275673144969061,0,0.290033387828457,0.340906509664404,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.272999822815972,0,1.13008116620243,0,0,0,1.15755106853338,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58913193817589,0,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,2.54253650292766,0,0,0,0.173624994933292,0.885741385813839,0,0,0.442317039724898,0.591095237907095,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,1.89898258075224,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0.242780379534093,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0.277349346026277,0,0,0,0,0.343972064943233,0.290268993867255,0.146178634172371,0.246346371159628,0,0,0,0,0.19871461170299,0,0.195551382734803,0.881747022766871,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0.959575986597226,0.714695326373367,0,0.76280561296425,0,0,0.326587360109409,0,0,0.170388021785422,0.113312091520126,0,0,0,0.26446520348538,0.171086837884329,0.704815022316672,0.213574825135389,0,0,0.496166021811951,0,0,0.638341257770182,0.544017803369474,0,0,0,0,0,0.366078794705889,0.1251909307065,0.573409195690071,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0.300515217994437,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.639471856518258,9.16510896871795,0.314531883711793,0.327628914576042,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.471878893390961,0,1.5018336599544,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0.0634158101939068,0,0,0,0,0.894336993477167,0,0,0,0,0,0.115233987555779,0.171488009437418,0.271878931907327,0,0.590969204419841,0.111231401892069,0,0.157115589916002,0,0,0.215927591218621,0,0.142953088353313,0,0.23248285073625,0,0,0,0,0,0,0,0,0.846774100381858,2.52017555398455,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,1.19370465096821,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0.633492505057185,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,1.11734485732544,0,0,0,0,0,0.202056159043763,0.143444410785353,0,0.325613074443898,0.106727345877715,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p1@ENST00000379677,p1@uc002rll.1 | |short_description=p1@ENST00000379677,p1@uc002rll.1 | ||
}} | }} |
Latest revision as of 18:16, 16 September 2015
Short description: | p1@ENST00000379677, p1@uc002rll.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000379677_5end, CAGE_peak_1_at_uc002rll.1_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 0bp_to_ENST00000379677, uc002rll.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.41e-14 | 1 |
glomerular cell | 2.07e-08 | 7 |
kidney corpuscule cell | 2.07e-08 | 7 |
smooth muscle cell of trachea | 7.52e-08 | 2 |
mesangial cell | 9.19e-08 | 2 |
kidney interstitial cell | 9.19e-08 | 2 |
juxtaglomerular complex cell | 9.19e-08 | 2 |
renal interstitial pericyte | 9.19e-08 | 2 |
extraglomerular mesangial cell | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 4.09e-08 | 2 |
clear cell adenocarcinoma | 4.69e-08 | 2 |