FFCP PHASE1:Hg19::chr19:35759424..35759454,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7392 | |EntrezGene=7392 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12594 | |HGNC=12594 | ||
|TSSclassifier=strong | |||
|UniProt=Q15853,Q6YI47 | |UniProt=Q15853,Q6YI47 | ||
|association_with_transcript=-441bp_to_ENST00000222305,ENST00000343550,NM_003367,NM_207291,uc002nyq.1,uc002nyr.1,uc002nys.1,uc002nyt.1,uc010xss.1_5end | |association_with_transcript=-441bp_to_ENST00000222305,ENST00000343550,NM_003367,NM_207291,uc002nyq.1,uc002nyr.1,uc002nys.1,uc002nyt.1,uc010xss.1_5end | ||
|cluster_id=chr19:35759424..35759454,+ | |||
|description=CAGE_peak_2_at_USF2_5end | |description=CAGE_peak_2_at_USF2_5end | ||
|id=chr19:35759424..35759454,+ | |id=chr19:35759424..35759454,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.92e-11!140;CL:0002057!6.17e-11!42;CL:0002087!6.71e-11!119;CL:0002031!1.20e-10!124;CL:0000860!6.76e-10!45;CL:0000037!1.46e-08!172;CL:0000566!1.46e-08!172;CL:0000988!2.46e-08!182;CL:0002032!3.89e-08!165;CL:0000837!3.89e-08!165;CL:0000766!1.24e-07!76;CL:0000557!1.78e-07!71;CL:0000839!5.89e-07!70;CL:0002009!9.98e-07!65 | |ontology_enrichment_celltype=CL:0000738!4.92e-11!140;CL:0002057!6.17e-11!42;CL:0002087!6.71e-11!119;CL:0002031!1.20e-10!124;CL:0000860!6.76e-10!45;CL:0000037!1.46e-08!172;CL:0000566!1.46e-08!172;CL:0000988!2.46e-08!182;CL:0002032!3.89e-08!165;CL:0000837!3.89e-08!165;CL:0000766!1.24e-07!76;CL:0000557!1.78e-07!71;CL:0000839!5.89e-07!70;CL:0002009!9.98e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.92e-08;33!CL:0002057;9.92e-08;33!CL:0000576;7.99e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.46e-11,136;CL:0002087,1.73e-11,115;CL:0002031,3.28e-11,120;CL:0000860,6.17e-11,42;CL:0002057,6.17e-11,42;CL:0000988,5.31e-09,177;CL:0000037,6.05e-09,168;CL:0002032,1.63e-08,161;CL:0000837,1.63e-08,161;CL:0000766,2.94e-08,72;CL:0000557,3.97e-08,67;CL:0000473,8.00e-08,48;CL:0000234,8.00e-08,48;CL:0000839,1.42e-07,66;CL:0002009,2.35e-07,61;CL:0002194,3.08e-07,59;CL:0000576,3.08e-07,59;CL:0000040,3.08e-07,59;CL:0000559,3.08e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;3.81e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-34!115;UBERON:0001049!9.21e-23!57;UBERON:0005068!9.21e-23!57;UBERON:0006241!9.21e-23!57;UBERON:0007135!9.21e-23!57;UBERON:0002616!1.44e-18!59;UBERON:0001017!7.49e-17!82;UBERON:0002780!1.39e-16!41;UBERON:0001890!1.39e-16!41;UBERON:0006240!1.39e-16!41;UBERON:0005743!2.18e-16!86;UBERON:0003080!2.81e-16!42;UBERON:0000955!1.19e-15!69;UBERON:0006238!1.19e-15!69;UBERON:0002346!1.39e-15!90;UBERON:0003075!3.97e-15!86;UBERON:0007284!3.97e-15!86;UBERON:0000073!2.49e-14!94;UBERON:0001016!2.49e-14!94;UBERON:0001893!8.33e-13!34;UBERON:0002020!1.59e-12!34;UBERON:0003528!1.59e-12!34;UBERON:0002791!2.02e-12!33;UBERON:0001869!7.04e-12!32;UBERON:0002619!2.44e-11!22;UBERON:0003056!1.96e-10!61;UBERON:0001950!4.39e-10!20;UBERON:0002390!7.38e-10!102;UBERON:0003061!7.38e-10!102;UBERON:0000956!7.33e-09!25;UBERON:0000203!7.33e-09!25;UBERON:0002193!2.51e-08!112;UBERON:0000153!3.95e-08!129;UBERON:0007811!3.95e-08!129;UBERON:0003076!9.65e-08!15;UBERON:0003057!9.65e-08!15;UBERON:0000924!1.19e-07!173;UBERON:0006601!1.19e-07!173;UBERON:0004121!2.98e-07!169;UBERON:0000033!3.59e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;8.67e-13;53!UBERON:0002616;8.67e-13;53!UBERON:0002780;1.33e-12;41!UBERON:0001890;1.33e-12;41!UBERON:0002619;3.96e-11;22!UBERON:0001893;6.08e-11;34!UBERON:0003528;8.75e-11;34!UBERON:0002020;8.75e-11;34!UBERON:0002791;9.30e-11;32!UBERON:0001869;9.98e-11;32!UBERON:0007023;5.24e-10;114!UBERON:0001950;7.34e-10;20!UBERON:0000956;9.02e-09;25!UBERON:0000203;9.02e-09;25!UBERON:0000955;8.75e-08;68!UBERON:0001017;1.91e-07;75!UBERON:0001016;8.92e-07;83 | |||
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| ||
|short_description=p2@USF2 | |short_description=p2@USF2 | ||
}} | }} |
Latest revision as of 11:10, 17 September 2015
Short description: | p2@USF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_USF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -441bp_to_ENST00000222305, ENST00000343550, NM_003367, NM_207291, uc002nyq.1, uc002nyr.1, uc002nys.1, uc002nyt.1, uc010xss.1_5end |
EntrezGene: | USF2 |
HGNC: | 12594 |
UniProt: | Q15853Q6YI47 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.46e-11 | 136 |
nongranular leukocyte | 1.73e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 3.28e-11 | 120 |
classical monocyte | 6.17e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.17e-11 | 42 |
hematopoietic cell | 5.31e-09 | 177 |
hematopoietic stem cell | 6.05e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.63e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.63e-08 | 161 |
myeloid leukocyte | 2.94e-08 | 72 |
granulocyte monocyte progenitor cell | 3.97e-08 | 67 |
defensive cell | 8.00e-08 | 48 |
phagocyte | 8.00e-08 | 48 |
myeloid lineage restricted progenitor cell | 1.42e-07 | 66 |
macrophage dendritic cell progenitor | 2.35e-07 | 61 |
monopoietic cell | 3.08e-07 | 59 |
monocyte | 3.08e-07 | 59 |
monoblast | 3.08e-07 | 59 |
promonocyte | 3.08e-07 | 59 |