FFCP PHASE1:Hg19::chr19:41868273..41868277,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:41868273..41868277,- | |||
|description=CAGE_peak_at_chr19:41868273..41868277,- | |description=CAGE_peak_at_chr19:41868273..41868277,- | ||
|id=chr19:41868273..41868277,- | |id=chr19:41868273..41868277,- | ||
|ontology_enrichment_celltype=CL:0000624!1.09e-07!6 | |ontology_enrichment_celltype=CL:0000624!1.09e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000624;9.49e-20;6!CL:0000791;7.01e-15;18!CL:0000789;7.01e-15;18!CL:0002419;7.01e-15;18!CL:0000084;6.36e-11;25!CL:0000623;9.90e-11;3!CL:0000306;1.76e-08;4!CL:0002222;1.76e-08;4!CL:0002224;1.76e-08;4!CL:0000542;1.66e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,7.84e-20,6;CL:0000791,6.53e-15,18;CL:0000789,6.53e-15,18;CL:0002420,6.53e-15,18;CL:0002419,6.53e-15,18;CL:0000790,6.53e-15,18;CL:0000838,6.52e-14,52;CL:0000542,1.17e-13,53;CL:0000051,1.17e-13,53;CL:0000084,6.05e-11,25;CL:0000827,6.05e-11,25;CL:0000623,1.20e-10,3;CL:0000825,1.20e-10,3;CL:0000306,1.70e-08,4;CL:0002222,1.70e-08,4;CL:0002224,1.70e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000790;7.01e-15;18!CL:0000051;1.66e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.76e-08;4!UBERON:0005389;1.76e-08;4!UBERON:0000484;1.76e-08;4!UBERON:0000965;1.76e-08;4!UBERON:0001803;1.76e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.70e-08,4;UBERON:0005389,1.70e-08,4;UBERON:0000484,1.70e-08,4;UBERON:0002546,1.70e-08,4;UBERON:0000965,1.70e-08,4;UBERON:0001803,1.70e-08,4;UBERON:0003073,1.70e-08,4;UBERON:0005426,1.70e-08,4 | |||
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| ||
|short_description=p@chr19:41868273..41868277,- | |short_description=p@chr19:41868273..41868277,- | ||
}} | }} |
Latest revision as of 08:26, 26 July 2015
Short description: | p@chr19:41868273..41868277, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:41868273..41868277, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 7.84e-20 | 6 |
mature alpha-beta T cell | 6.53e-15 | 18 |
alpha-beta T cell | 6.53e-15 | 18 |
immature T cell | 6.53e-15 | 18 |
mature T cell | 6.53e-15 | 18 |
immature alpha-beta T cell | 6.53e-15 | 18 |
lymphoid lineage restricted progenitor cell | 6.52e-14 | 52 |
lymphocyte | 1.17e-13 | 53 |
common lymphoid progenitor | 1.17e-13 | 53 |
T cell | 6.05e-11 | 25 |
pro-T cell | 6.05e-11 | 25 |
natural killer cell | 1.20e-10 | 3 |
pro-NK cell | 1.20e-10 | 3 |
crystallin accumulating cell | 1.70e-08 | 4 |
vertebrate lens cell | 1.70e-08 | 4 |
lens epithelial cell | 1.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.70e-08 | 4 |
transparent eye structure | 1.70e-08 | 4 |
simple cuboidal epithelium | 1.70e-08 | 4 |
cranial placode | 1.70e-08 | 4 |
lens of camera-type eye | 1.70e-08 | 4 |
epithelium of lens | 1.70e-08 | 4 |
lens placode | 1.70e-08 | 4 |
lens vesicle | 1.70e-08 | 4 |