FFCP PHASE1:Hg19::chr3:130569347..130569360,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27032 | |EntrezGene=27032 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13211 | |HGNC=13211 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z3X9,G3XAH8,P98194,B4E2Q0,B4DSW3 | |UniProt=B7Z3X9,G3XAH8,P98194,B4E2Q0,B4DSW3 | ||
|association_with_transcript=-8bp_to_NM_001199180,NM_001199181,NM_001199182_5end | |association_with_transcript=-8bp_to_NM_001199180,NM_001199181,NM_001199182_5end | ||
|cluster_id=chr3:130569347..130569360,+ | |||
|coexpression_cluster_id=C2719 | |||
|description=CAGE_peak_13_at_ATP2C1_5end | |description=CAGE_peak_13_at_ATP2C1_5end | ||
|id=chr3:130569347..130569360,+ | |id=chr3:130569347..130569360,+ | ||
|ontology_enrichment_celltype=CL:0000763!1.95e-35!112;CL:0000049!1.95e-35!112;CL:0002032!2.53e-34!165;CL:0000837!2.53e-34!165;CL:0000988!7.72e-34!182;CL:0000037!3.17e-33!172;CL:0000566!3.17e-33!172;CL:0002031!1.50e-23!124;CL:0000839!5.83e-23!70;CL:0000557!1.15e-22!71;CL:0000766!6.78e-20!76;CL:0002057!6.43e-19!42;CL:0000738!1.27e-18!140;CL:0002009!2.83e-18!65;CL:0000860!4.72e-17!45;CL:0002194!2.08e-16!63;CL:0000576!2.08e-16!63;CL:0000040!2.08e-16!63;CL:0000559!2.08e-16!63;CL:0002087!2.48e-15!119;CL:0002274!3.18e-08!5;CL:0000457!3.18e-08!5;CL:0002191!3.18e-08!5;CL:0000097!3.18e-08!5;CL:0000831!3.18e-08!5;CL:0002028!3.18e-08!5 | |ontology_enrichment_celltype=CL:0000763!1.95e-35!112;CL:0000049!1.95e-35!112;CL:0002032!2.53e-34!165;CL:0000837!2.53e-34!165;CL:0000988!7.72e-34!182;CL:0000037!3.17e-33!172;CL:0000566!3.17e-33!172;CL:0002031!1.50e-23!124;CL:0000839!5.83e-23!70;CL:0000557!1.15e-22!71;CL:0000766!6.78e-20!76;CL:0002057!6.43e-19!42;CL:0000738!1.27e-18!140;CL:0002009!2.83e-18!65;CL:0000860!4.72e-17!45;CL:0002194!2.08e-16!63;CL:0000576!2.08e-16!63;CL:0000040!2.08e-16!63;CL:0000559!2.08e-16!63;CL:0002087!2.48e-15!119;CL:0002274!3.18e-08!5;CL:0000457!3.18e-08!5;CL:0002191!3.18e-08!5;CL:0000097!3.18e-08!5;CL:0000831!3.18e-08!5;CL:0002028!3.18e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.56e-19;5!CL:0000860;2.48e-19;33!CL:0002057;2.48e-19;33!CL:0000763;5.29e-14;100!CL:0000473;2.66e-13;39!CL:0000234;2.66e-13;39!CL:0000766;2.09e-11;69!CL:0000576;8.50e-11;48!CL:0000163;9.65e-11;9!CL:0001014;8.49e-09;2!CL:0001016;8.49e-09;2!CL:0000988;9.66e-08;177!CL:0000738;2.95e-07;136!CL:0002087;3.45e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.66e-38,177;CL:0000763,1.55e-36,108;CL:0000049,1.55e-36,108;CL:0000037,2.42e-34,168;CL:0002032,3.92e-34,161;CL:0000837,3.92e-34,161;CL:0000557,3.65e-25,67;CL:0002031,3.72e-22,120;CL:0000839,5.93e-21,66;CL:0000860,1.49e-20,42;CL:0002057,1.49e-20,42;CL:0000097,1.90e-19,5;CL:0002028,1.90e-19,5;CL:0000766,8.26e-19,72;CL:0000738,9.90e-19,136;CL:0000473,1.65e-17,48;CL:0000234,1.65e-17,48;CL:0002009,1.81e-16,61;CL:0002194,2.92e-13,59;CL:0000576,2.92e-13,59;CL:0000040,2.92e-13,59;CL:0000559,2.92e-13,59;CL:0002087,1.85e-12,115;CL:0000134,1.97e-11,354;CL:0002320,4.97e-11,361;CL:0000163,1.07e-10,9;CL:0000219,1.29e-09,386;CL:0000034,1.47e-09,441;CL:0001014,7.24e-09,2;CL:0001016,7.24e-09,2;CL:0000048,6.89e-08,427;CL:0000723,1.19e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.08e-14;42!CL:0000049;7.93e-08;108 | |||
|ontology_enrichment_disease=DOID:2531!1.47e-14!51;DOID:0060083!1.47e-14!51;DOID:1240!2.86e-14!39;DOID:8692!1.71e-12!31;DOID:1036!5.92e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.50e-15;39!DOID:8692;8.10e-15;31!DOID:2531;1.74e-11;51!DOID:0060083;1.74e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.13e-19,39;DOID:2531,3.01e-16,51;DOID:0060083,3.01e-16,51;DOID:8692,5.99e-16,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.34e-22!102;UBERON:0003061!3.34e-22!102;UBERON:0002371!4.94e-20!80;UBERON:0002193!8.38e-19!112;UBERON:0001474!1.02e-17!86;UBERON:0004765!5.28e-14!101;UBERON:0001434!5.28e-14!101;UBERON:0002405!7.33e-14!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.67e-24,76;UBERON:0002390,6.28e-23,98;UBERON:0003061,6.28e-23,98;UBERON:0001474,1.09e-21,82;UBERON:0002193,3.22e-20,108;UBERON:0004765,2.88e-19,90;UBERON:0002405,1.82e-18,93;UBERON:0001434,8.77e-17,100;UBERON:0002384,1.76e-10,371;UBERON:0002204,7.08e-08,167;UBERON:0003081,7.22e-08,203 | |||
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|short_description=p13@ATP2C1 | |short_description=p13@ATP2C1 | ||
}} | }} |
Latest revision as of 19:00, 24 September 2015
Short description: | p13@ATP2C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ATP2C1_5end |
Coexpression cluster: | C2719_CD14_CD34_immature_CD133_acute_Macrophage_pharyngeal |
Association with transcript: | -8bp_to_NM_001199180, NM_001199181, NM_001199182_5end |
EntrezGene: | ATP2C1 |
HGNC: | 13211 |
UniProt: | B7Z3X9G3XAH8P98194B4E2Q0B4DSW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.67e-24 | 76 |
hematopoietic system | 6.28e-23 | 98 |
blood island | 6.28e-23 | 98 |
bone element | 1.09e-21 | 82 |
hemolymphoid system | 3.22e-20 | 108 |
skeletal element | 2.88e-19 | 90 |
immune system | 1.82e-18 | 93 |
skeletal system | 8.77e-17 | 100 |
connective tissue | 1.76e-10 | 371 |
musculoskeletal system | 7.08e-08 | 167 |
lateral plate mesoderm | 7.22e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.13e-19 | 39 |
hematologic cancer | 3.01e-16 | 51 |
immune system cancer | 3.01e-16 | 51 |
myeloid leukemia | 5.99e-16 | 31 |