FFCP PHASE1:Hg19::chr19:6718125..6718152,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:6718125..6718152,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr19:6718125..6718152,+ | |description=CAGE_peak_at_chr19:6718125..6718152,+ | ||
|id=chr19:6718125..6718152,+ | |id=chr19:6718125..6718152,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.08e-22;12!CL:0000214;2.28e-08;3!CL:0000511;4.68e-07;1!CL:0002625;4.68e-07;1!CL:0000216;4.68e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.47e-22,12;CL:0000214,2.64e-08,3;CL:0000511,4.69e-07,1;CL:0002625,4.69e-07,1;CL:0000216,4.69e-07,1;CL:1001319,9.25e-07,1;CL:1000600,9.25e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.15e-17;11!UBERON:0009497;7.32e-15;13!UBERON:0003104;6.29e-08;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.30e-14!115;UBERON:0000477!1.56e-09!286;UBERON:0009854!2.10e-09!23;UBERON:0004111!2.40e-09!241;UBERON:0000483!3.34e-09!309;UBERON:0003929!4.90e-09!54;UBERON:0000025!6.61e-09!194;UBERON:0000119!6.87e-09!312;UBERON:0008835!1.30e-08!22;UBERON:0003894!1.30e-08!22;UBERON:0009497!4.02e-08!25;UBERON:0000015!4.02e-08!25;UBERON:0002423!4.02e-08!25;UBERON:0006235!4.02e-08!25;UBERON:0004161!4.02e-08!25;UBERON:0000481!5.74e-08!347;UBERON:0009856!8.66e-08!26;UBERON:0007499!4.44e-07!25;UBERON:0002107!7.12e-07!19;UBERON:0006925!7.12e-07!19;UBERON:0008836!7.12e-07!19 | |ontology_enrichment_uberon=UBERON:0007023!4.30e-14!115;UBERON:0000477!1.56e-09!286;UBERON:0009854!2.10e-09!23;UBERON:0004111!2.40e-09!241;UBERON:0000483!3.34e-09!309;UBERON:0003929!4.90e-09!54;UBERON:0000025!6.61e-09!194;UBERON:0000119!6.87e-09!312;UBERON:0008835!1.30e-08!22;UBERON:0003894!1.30e-08!22;UBERON:0009497!4.02e-08!25;UBERON:0000015!4.02e-08!25;UBERON:0002423!4.02e-08!25;UBERON:0006235!4.02e-08!25;UBERON:0004161!4.02e-08!25;UBERON:0000481!5.74e-08!347;UBERON:0009856!8.66e-08!26;UBERON:0007499!4.44e-07!25;UBERON:0002107!7.12e-07!19;UBERON:0006925!7.12e-07!19;UBERON:0008836!7.12e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.76e-22;19!UBERON:0006925;1.76e-22;19!UBERON:0002423;1.03e-16;25!UBERON:0002365;1.57e-12;31!UBERON:0002330;1.57e-12;31!UBERON:0002368;3.69e-11;33!UBERON:0006915;2.28e-08;3!UBERON:0007616;2.28e-08;3!UBERON:0002217;2.28e-08;3!UBERON:0002018;2.28e-08;3!UBERON:0000949;3.20e-07;43!UBERON:0001136;4.68e-07;1!UBERON:0001343;4.68e-07;1!UBERON:0004910;4.68e-07;1!UBERON:0004813;4.68e-07;1!UBERON:0001282;5.72e-07;1!UBERON:0009842;5.72e-07;1!UBERON:0003704;5.72e-07;1!UBERON:0001171;5.72e-07;1!UBERON:0001172;5.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.84e-22,19;UBERON:0006925,1.84e-22,19;UBERON:0008836,1.84e-22,19;UBERON:0008835,3.47e-19,22;UBERON:0003894,3.47e-19,22;UBERON:0009854,2.77e-18,23;UBERON:0007499,1.07e-16,25;UBERON:0009497,1.07e-16,25;UBERON:0000015,1.07e-16,25;UBERON:0002423,1.07e-16,25;UBERON:0006235,1.07e-16,25;UBERON:0004161,1.07e-16,25;UBERON:0009856,5.38e-16,26;UBERON:0002365,3.65e-13,31;UBERON:0002330,3.65e-13,31;UBERON:0002368,1.75e-11,35;UBERON:0003914,9.09e-10,117;UBERON:0005256,2.33e-09,122;UBERON:0000949,1.37e-08,45;UBERON:0005172,1.61e-08,54;UBERON:0005173,1.61e-08,54;UBERON:0006915,2.64e-08,3;UBERON:0007616,2.64e-08,3;UBERON:0002217,2.64e-08,3;UBERON:0002018,2.64e-08,3;UBERON:0002417,1.73e-07,60;UBERON:0000916,1.73e-07,60;UBERON:0003104,3.07e-07,160;UBERON:0009142,3.07e-07,160;UBERON:0001136,4.69e-07,1;UBERON:0001343,4.69e-07,1;UBERON:0004910,4.69e-07,1;UBERON:0005154,4.69e-07,1;UBERON:0005295,4.69e-07,1;UBERON:0004813,4.69e-07,1;UBERON:0005297,4.69e-07,1;UBERON:0005294,4.69e-07,1;UBERON:0010141,4.69e-07,1;UBERON:0005891,4.69e-07,1;UBERON:0001282,5.89e-07,1;UBERON:0009842,5.89e-07,1;UBERON:0003704,5.89e-07,1;UBERON:0001171,5.89e-07,1;UBERON:0001172,5.89e-07,1;UBERON:0003929,6.58e-07,54;UBERON:0004645,9.25e-07,1;UBERON:0001256,9.25e-07,1;UBERON:0001259,9.25e-07,1 | |||
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| ||
|short_description=p@chr19:6718125..6718152,+ | |short_description=p@chr19:6718125..6718152,+ | ||
}} | }} |
Latest revision as of 18:18, 27 July 2015
Short description: | p@chr19:6718125..6718152, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6718125..6718152, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.47e-22 | 12 |
synovial cell | 2.64e-08 | 3 |
androgen binding protein secreting cell | 4.69e-07 | 1 |
seminiferous tubule epithelial cell | 4.69e-07 | 1 |
Sertoli cell | 4.69e-07 | 1 |
bladder cell | 9.25e-07 | 1 |
lower urinary tract cell | 9.25e-07 | 1 |