FFCP PHASE1:Hg19::chr12:371994..372008,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:371994..372008,-
|short_description=p1@SLC6A13
|description=CAGE_peak_1_at_SLC6A13_5end
|association_with_transcript=0bp_to_ENST00000313154,ENST0000034316...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6540 | |EntrezGene=6540 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11046 | |HGNC=11046 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7M5,Q9NSD5,Q8WW56,F5H5D9 | |UniProt=F8W7M5,Q9NSD5,Q8WW56,F5H5D9 | ||
|association_with_transcript=0bp_to_ENST00000313154,ENST00000343164,ENST00000436453,ENST00000536842,ENST00000542272,uc001qic.1,uc001qid.1,uc010sdl.1_5end | |||
|cluster_id=chr12:371994..372008,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_1_at_SLC6A13_5end | |||
|id=chr12:371994..372008,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000669;1.14e-10;4!CL:0002575;6.39e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,1.21e-10,4;CL:0002575,6.48e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.96e-19;82!UBERON:0006241;7.45e-09;3!UBERON:0003057;7.45e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;1.10e-53;34!UBERON:0002780;4.11e-53;41!UBERON:0001890;4.11e-53;41!UBERON:0003528;6.03e-53;34!UBERON:0002020;6.03e-53;34!UBERON:0001869;3.59e-52;32!UBERON:0002791;4.52e-52;32!UBERON:0000073;9.69e-50;53!UBERON:0002616;9.69e-50;53!UBERON:0002619;2.48e-49;22!UBERON:0001950;4.41e-45;20!UBERON:0000956;6.74e-43;25!UBERON:0000203;6.74e-43;25!UBERON:0000955;2.17e-33;68!UBERON:0001017;1.45e-32;75!UBERON:0001016;2.38e-27;83!UBERON:0000125;1.86e-21;9!UBERON:0002308;1.86e-21;9!UBERON:0002420;3.34e-21;9!UBERON:0007245;3.34e-21;9!UBERON:0010009;3.34e-21;9!UBERON:0010011;3.34e-21;9!UBERON:0000454;3.34e-21;9!UBERON:0009663;3.89e-17;7!UBERON:0007023;6.26e-17;114!UBERON:0002298;6.10e-16;6!UBERON:0000200;2.01e-15;6!UBERON:0004732;4.21e-15;13!UBERON:0001872;2.56e-13;5!UBERON:0004733;5.21e-13;12!UBERON:0002028;5.21e-13;12!UBERON:0001871;5.89e-13;6!UBERON:0002021;7.33e-13;5!UBERON:0001894;7.71e-13;7!UBERON:0000349;2.05e-12;5!UBERON:0002784;9.74e-11;4!UBERON:0000369;1.04e-10;4!UBERON:0002435;1.04e-10;4!UBERON:0000204;1.04e-10;4!UBERON:0011216;1.95e-10;132!UBERON:0010314;7.29e-10;132!UBERON:0001896;3.57e-09;3!UBERON:0005290;3.57e-09;3!UBERON:0002240;7.45e-09;3!UBERON:0005174;7.45e-09;3!UBERON:0001137;7.45e-09;3!UBERON:0001870;1.18e-08;3!UBERON:0000988;1.81e-08;3!UBERON:0005383;3.34e-08;3!UBERON:0005382;3.34e-08;3!UBERON:0002680;5.90e-07;9!UBERON:0001895;5.90e-07;9!UBERON:0003296;8.31e-07;4!UBERON:0010133;8.31e-07;4 | |||
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| ||
|short_description=p1@SLC6A13 | |||
}} | }} |
Latest revision as of 05:45, 18 September 2015
Short description: | p1@SLC6A13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC6A13_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 0bp_to_ENST00000313154, ENST00000343164, ENST00000436453, ENST00000536842, ENST00000542272, uc001qic.1, uc001qid.1, uc010sdl.1_5end |
EntrezGene: | SLC6A13 |
HGNC: | 11046 |
UniProt: | F8W7M5Q9NSD5Q8WW56F5H5D9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 1.21e-10 | 4 |
central nervous system pericyte | 6.48e-07 | 2 |