FFCP PHASE1:Hg19::chr3:52811596..52811637,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3697 | |EntrezGene=3697 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6166 | |HGNC=6166 | ||
|TSSclassifier=strong | |||
|UniProt=P19827,F8WAS2,F5H7E1 | |UniProt=P19827,F8WAS2,F5H7E1 | ||
|association_with_transcript=0bp_to_ENST00000273283,ENST00000480409,ENST00000542827,NM_002215,uc003dfs.2,uc010hmn.1_5end | |association_with_transcript=0bp_to_ENST00000273283,ENST00000480409,ENST00000542827,NM_002215,uc003dfs.2,uc010hmn.1_5end | ||
|cluster_id=chr3:52811596..52811637,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_ITIH1_5end | |description=CAGE_peak_1_at_ITIH1_5end | ||
|id=chr3:52811596..52811637,+ | |id=chr3:52811596..52811637,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.54e-22!12;CL:0000417!2.54e-22!12;CL:0000668!2.54e-22!12;CL:0000414!2.54e-22!12;CL:0000412!2.54e-22!12;CL:0000182!2.54e-22!12;CL:0002242!6.60e-07!1;CL:0000228!6.60e-07!1;CL:0002372!6.60e-07!1 | |ontology_enrichment_celltype=CL:0000181!2.54e-22!12;CL:0000417!2.54e-22!12;CL:0000668!2.54e-22!12;CL:0000414!2.54e-22!12;CL:0000412!2.54e-22!12;CL:0000182!2.54e-22!12;CL:0002242!6.60e-07!1;CL:0000228!6.60e-07!1;CL:0002372!6.60e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.66e-31;12!CL:0000228;1.25e-11;1!CL:0002372;1.25e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.66e-31,12;CL:0000228,1.19e-11,1;CL:0002372,1.19e-11,1;CL:0000223,3.17e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.08e-24;11!UBERON:0009497;4.10e-20;13!UBERON:0001041;1.13e-08;30!UBERON:0003104;4.21e-08;31 | |||
|ontology_enrichment_disease=DOID:114!7.69e-12!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!4.02e-24!26;UBERON:0002107!8.77e-23!19;UBERON:0006925!8.77e-23!19;UBERON:0008836!8.77e-23!19;UBERON:0009497!7.67e-21!25;UBERON:0000015!7.67e-21!25;UBERON:0002423!7.67e-21!25;UBERON:0006235!7.67e-21!25;UBERON:0004161!7.67e-21!25;UBERON:0008835!1.84e-19!22;UBERON:0003894!1.84e-19!22;UBERON:0009854!1.51e-18!23;UBERON:0002368!3.67e-17!35;UBERON:0007499!6.14e-17!25;UBERON:0009856!3.17e-16!26;UBERON:0003929!1.09e-14!54;UBERON:0005172!1.69e-14!55;UBERON:0005173!1.69e-14!55;UBERON:0002365!2.35e-13!31;UBERON:0002330!2.35e-13!31;UBERON:0000949!7.14e-13!45;UBERON:0002417!8.30e-13!61;UBERON:0000916!8.30e-13!61;UBERON:0002530!2.56e-09!59;UBERON:0005911!9.00e-09!82;UBERON:0005177!2.78e-07!107;UBERON:0002146!8.75e-07!1;UBERON:0005623!8.75e-07!1;UBERON:0009569!9.49e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.12e-35;19!UBERON:0006925;9.12e-35;19!UBERON:0002423;3.12e-26;25!UBERON:0002365;3.14e-20;31!UBERON:0002330;3.14e-20;31!UBERON:0002368;2.92e-18;33!UBERON:0000949;4.40e-11;43!UBERON:0005172;1.68e-10;52!UBERON:0005173;1.68e-10;52!UBERON:0001007;1.77e-07;81!UBERON:0002417;6.28e-07;58!UBERON:0000916;6.28e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.13e-35,19;UBERON:0006925,9.13e-35,19;UBERON:0008836,9.13e-35,19;UBERON:0008835,6.42e-30,22;UBERON:0003894,6.42e-30,22;UBERON:0009854,1.39e-28,23;UBERON:0007499,3.12e-26,25;UBERON:0009497,3.12e-26,25;UBERON:0000015,3.12e-26,25;UBERON:0002423,3.12e-26,25;UBERON:0006235,3.12e-26,25;UBERON:0004161,3.12e-26,25;UBERON:0009856,3.42e-25,26;UBERON:0002365,5.40e-21,31;UBERON:0002330,5.40e-21,31;UBERON:0002368,1.70e-18,35;UBERON:0005172,9.32e-15,54;UBERON:0005173,9.32e-15,54;UBERON:0003929,1.09e-14,54;UBERON:0000949,3.45e-14,45;UBERON:0002417,3.63e-13,60;UBERON:0000916,3.63e-13,60;UBERON:0002530,1.33e-10,59;UBERON:0005911,2.82e-09,82;UBERON:0001041,1.03e-08,87;UBERON:0004921,1.73e-07,118;UBERON:0005177,2.43e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1434978119451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1851.89105874695,1164.65025176299,1010.84153033188,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,715.413743870136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,723.212677567217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,19.3866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0.199679000498991,1.71690419254628,0,0,0,0,0.472699093843342,1.2362378757175,1.61768505250044,2.55911451938347,0,0,0,0,0,0,0,0,0,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,1737.37673025367,698.311304567406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,6.18795724546341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1434978119451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1851.89105874695,1164.65025176299,1010.84153033188,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,715.413743870136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,723.212677567217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,19.3866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0.199679000498991,1.71690419254628,0,0,0,0,0.472699093843342,1.2362378757175,1.61768505250044,2.55911451938347,0,0,0,0,0,0,0,0,0,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,1737.37673025367,698.311304567406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,6.18795724546341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ITIH1 | |short_description=p1@ITIH1 | ||
}} | }} |
Latest revision as of 00:52, 19 September 2015
Short description: | p1@ITIH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITIH1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000273283, ENST00000480409, ENST00000542827, NM_002215, uc003dfs.2, uc010hmn.1_5end |
EntrezGene: | ITIH1 |
HGNC: | 6166 |
UniProt: | P19827F8WAS2F5H7E1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.66e-31 | 12 |
multinucleate cell | 1.19e-11 | 1 |
myotube | 1.19e-11 | 1 |
endodermal cell | 3.17e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 9.13e-35 | 19 |
digestive gland | 9.13e-35 | 19 |
liver bud | 9.13e-35 | 19 |
hepatic diverticulum | 6.42e-30 | 22 |
liver primordium | 6.42e-30 | 22 |
digestive tract diverticulum | 1.39e-28 | 23 |
epithelial sac | 3.12e-26 | 25 |
epithelium of foregut-midgut junction | 3.12e-26 | 25 |
anatomical boundary | 3.12e-26 | 25 |
hepatobiliary system | 3.12e-26 | 25 |
foregut-midgut junction | 3.12e-26 | 25 |
septum transversum | 3.12e-26 | 25 |
sac | 3.42e-25 | 26 |
exocrine gland | 5.40e-21 | 31 |
exocrine system | 5.40e-21 | 31 |
endocrine gland | 1.70e-18 | 35 |
abdomen element | 9.32e-15 | 54 |
abdominal segment element | 9.32e-15 | 54 |
gut epithelium | 1.09e-14 | 54 |
endocrine system | 3.45e-14 | 45 |
abdominal segment of trunk | 3.63e-13 | 60 |
abdomen | 3.63e-13 | 60 |
gland | 1.33e-10 | 59 |
endo-epithelium | 2.82e-09 | 82 |
foregut | 1.03e-08 | 87 |
subdivision of digestive tract | 1.73e-07 | 118 |
trunk region element | 2.43e-07 | 101 |