FFCP PHASE1:Hg19::chr3:79068594..79068627,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6091 | |EntrezGene=6091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10249 | |HGNC=10249 | ||
|TSSclassifier=strong | |||
|UniProt=C9JVN5,E9PD49,Q1RMC7,B2RXI1,Q1RMC8 | |UniProt=C9JVN5,E9PD49,Q1RMC7,B2RXI1,Q1RMC8 | ||
|association_with_transcript=0bp_to_ENST00000398412,ENST00000436010,NM_001145845,NM_133631,uc003dqb.2,uc003dqc.2,uc003dqd.2_5end | |association_with_transcript=0bp_to_ENST00000398412,ENST00000436010,NM_001145845,NM_133631,uc003dqb.2,uc003dqc.2,uc003dqd.2_5end | ||
|cluster_id=chr3:79068594..79068627,- | |||
|description=CAGE_peak_1_at_ROBO1_5end | |description=CAGE_peak_1_at_ROBO1_5end | ||
|id=chr3:79068594..79068627,- | |id=chr3:79068594..79068627,- | ||
|ontology_enrichment_celltype=CL:0000055!1.12e-17!180;CL:0000057!4.06e-09!75;CL:0000393!1.16e-07!60;CL:0000211!1.16e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.12e-17!180;CL:0000057!4.06e-09!75;CL:0000393!1.16e-07!60;CL:0000211!1.16e-07!60 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.49e-09,76;CL:0000393,4.70e-08,61;CL:0000211,4.70e-08,61;CL:0000680,4.34e-07,58;CL:0000056,4.34e-07,58;CL:0000355,4.34e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.72e-23!365;UBERON:0000481!4.64e-20!347;UBERON:0000924!9.34e-16!173;UBERON:0006601!9.34e-16!173;UBERON:0004121!1.54e-15!169;UBERON:0000119!7.53e-14!312;UBERON:0000483!2.20e-13!309;UBERON:0000468!1.65e-12!659;UBERON:0000033!9.48e-12!123;UBERON:0000153!1.60e-11!129;UBERON:0007811!1.60e-11!129;UBERON:0000477!3.29e-11!286;UBERON:0000922!1.18e-10!612;UBERON:0001017!1.80e-10!82;UBERON:0005743!5.82e-10!86;UBERON:0003102!7.26e-10!95;UBERON:0000073!9.99e-10!94;UBERON:0001016!9.99e-10!94;UBERON:0002050!1.75e-09!605;UBERON:0005423!1.75e-09!605;UBERON:0000914!2.52e-09!83;UBERON:0002329!2.52e-09!83;UBERON:0003077!2.52e-09!83;UBERON:0003059!2.52e-09!83;UBERON:0007282!2.52e-09!83;UBERON:0009618!2.52e-09!83;UBERON:0007285!2.52e-09!83;UBERON:0000923!3.80e-09!604;UBERON:0005291!3.80e-09!604;UBERON:0006598!3.80e-09!604;UBERON:0002532!3.80e-09!604;UBERON:0005256!9.25e-09!143;UBERON:0003104!1.60e-08!238;UBERON:0009142!1.60e-08!238;UBERON:0000955!1.85e-08!69;UBERON:0006238!1.85e-08!69;UBERON:0000467!2.99e-08!625;UBERON:0000480!5.27e-08!626;UBERON:0002616!6.18e-08!59;UBERON:0000486!9.35e-08!82;UBERON:0002346!1.30e-07!90;UBERON:0003075!1.89e-07!86;UBERON:0007284!1.89e-07!86;UBERON:0004290!4.08e-07!70;UBERON:0002100!4.27e-07!216;UBERON:0000064!7.02e-07!219;UBERON:0004111!7.55e-07!241;UBERON:0003056!9.97e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.13e-15,171;UBERON:0000924,1.13e-15,171;UBERON:0006601,1.13e-15,171;UBERON:0000119,5.47e-14,309;UBERON:0011216,1.11e-13,223;UBERON:0000483,1.61e-13,306;UBERON:0010314,2.85e-12,132;UBERON:0001017,1.62e-10,81;UBERON:0010371,1.79e-10,104;UBERON:0001016,3.24e-10,89;UBERON:0003102,1.63e-09,99;UBERON:0000922,1.84e-09,592;UBERON:0003104,5.13e-09,160;UBERON:0009142,5.13e-09,160;UBERON:0000955,1.73e-08,68;UBERON:0006238,1.73e-08,68;UBERON:0002050,2.36e-08,564;UBERON:0005423,2.78e-08,581;UBERON:0000923,4.31e-08,560;UBERON:0010316,4.31e-08,560;UBERON:0005291,4.31e-08,560;UBERON:0006598,4.31e-08,560;UBERON:0010317,4.31e-08,560;UBERON:0002532,4.31e-08,560;UBERON:0002346,4.70e-08,86;UBERON:0000486,4.80e-08,83;UBERON:0007524,5.91e-08,73;UBERON:0003075,6.76e-08,82;UBERON:0007284,6.76e-08,82;UBERON:0003077,1.30e-07,72;UBERON:0007285,1.30e-07,72;UBERON:0002329,1.77e-07,71;UBERON:0003059,1.77e-07,71;UBERON:0007282,1.77e-07,71;UBERON:0004290,1.77e-07,71;UBERON:0009618,1.77e-07,71;UBERON:0005256,2.85e-07,122;UBERON:0003056,8.18e-07,61;UBERON:0007503,8.59e-07,78 | |||
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| ||
|short_description=p1@ROBO1 | |short_description=p1@ROBO1 | ||
}} | }} |
Latest revision as of 16:40, 19 September 2015
Short description: | p1@ROBO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ROBO1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000398412, ENST00000436010, NM_001145845, NM_133631, uc003dqb.2, uc003dqc.2, uc003dqd.2_5end |
EntrezGene: | ROBO1 |
HGNC: | 10249 |
UniProt: | C9JVN5E9PD49Q1RMC7B2RXI1Q1RMC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.49e-09 | 76 |
electrically responsive cell | 4.70e-08 | 61 |
electrically active cell | 4.70e-08 | 61 |
muscle precursor cell | 4.34e-07 | 58 |
myoblast | 4.34e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.34e-07 | 58 |