FFCP PHASE1:Hg19::chr1:212209055..212209147,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51514 | |EntrezGene=51514 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30288 | |HGNC=30288 | ||
|TSSclassifier=strong | |||
|UniProt=E7ERQ0,F5GZ90 | |UniProt=E7ERQ0,F5GZ90 | ||
|association_with_transcript=0bp_to_ENST00000420235,ENST00000542077_5end | |association_with_transcript=0bp_to_ENST00000420235,ENST00000542077_5end | ||
|cluster_id=chr1:212209055..212209147,+ | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_DTL_5end | |description=CAGE_peak_1_at_DTL_5end | ||
|id=chr1:212209055..212209147,+ | |id=chr1:212209055..212209147,+ | ||
|ontology_enrichment_celltype=CL:0000012!3.48e-17!682;CL:0000548!1.28e-16!679;CL:0000004!1.28e-16!679;CL:0000255!1.28e-16!679;CL:0000066!1.58e-13!254;CL:0000003!6.66e-10!722;CL:0000333!7.68e-08!41;CL:0000063!1.34e-07!578;CL:0000133!1.69e-07!59;CL:0002319!2.73e-07!25 | |ontology_enrichment_celltype=CL:0000012!3.48e-17!682;CL:0000548!1.28e-16!679;CL:0000004!1.28e-16!679;CL:0000255!1.28e-16!679;CL:0000066!1.58e-13!254;CL:0000003!6.66e-10!722;CL:0000333!7.68e-08!41;CL:0000063!1.34e-07!578;CL:0000133!1.69e-07!59;CL:0002319!2.73e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.47e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.95e-14,253;CL:0000333,9.49e-08,41;CL:0000133,2.09e-07,59;CL:0002319,2.39e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.63e-56!235;DOID:14566!1.08e-54!239;DOID:0050687!1.69e-28!143;DOID:0050686!9.10e-26!137;DOID:305!1.14e-22!106;DOID:2531!2.27e-20!51;DOID:0060083!2.27e-20!51;DOID:1240!1.20e-16!39;DOID:8692!1.41e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.64e-13;39!DOID:2531;9.99e-13;51!DOID:0060083;9.99e-13;51!DOID:8692;2.40e-12;31!DOID:305;9.88e-08;106!DOID:0050687;2.23e-07;143!DOID:14566;3.87e-07;239!DOID:162;8.76e-07;235 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.71e-56,235;DOID:14566,3.05e-55,239;DOID:0050687,7.42e-29,143;DOID:0050686,4.29e-26,137;DOID:305,6.95e-23,106;DOID:2531,1.46e-20,51;DOID:0060083,1.46e-20,51;DOID:1240,8.41e-17,39;DOID:8692,1.09e-12,31 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.50e-07!9 | |ontology_enrichment_uberon=UBERON:0001737!4.50e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.89e-07;9!UBERON:0001557;3.89e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.95e-07,9 | |||
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| ||
|short_description=p1@DTL | |short_description=p1@DTL | ||
}} | }} |
Latest revision as of 23:23, 24 September 2015
Short description: | p1@DTL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DTL_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000420235, ENST00000542077_5end |
EntrezGene: | DTL |
HGNC: | 30288 |
UniProt: | E7ERQ0F5GZ90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.95e-14 | 253 |
migratory neural crest cell | 9.49e-08 | 41 |
neurectodermal cell | 2.09e-07 | 59 |
neural cell | 2.39e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.71e-56 | 235 |
disease of cellular proliferation | 3.05e-55 | 239 |
cell type cancer | 7.42e-29 | 143 |
organ system cancer | 4.29e-26 | 137 |
carcinoma | 6.95e-23 | 106 |
hematologic cancer | 1.46e-20 | 51 |
immune system cancer | 1.46e-20 | 51 |
leukemia | 8.41e-17 | 39 |
myeloid leukemia | 1.09e-12 | 31 |