FFCP PHASE1:Hg19::chr1:225620131..225620138,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:225620131..225620138,+ | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr1:225620131..225620138,+ | |description=CAGE_peak_at_chr1:225620131..225620138,+ | ||
|id=chr1:225620131..225620138,+ | |id=chr1:225620131..225620138,+ | ||
|ontology_enrichment_celltype=CL:0002032!3.30e-11!165;CL:0000837!3.30e-11!165;CL:0002150!5.44e-11!3;CL:0000861!5.44e-11!3;CL:0000037!1.93e-10!172;CL:0000566!1.93e-10!172;CL:0000988!2.34e-10!182;CL:0000763!5.62e-07!112;CL:0000049!5.62e-07!112;CL:0000738!6.00e-07!140;CL:0002031!7.03e-07!124 | |ontology_enrichment_celltype=CL:0002032!3.30e-11!165;CL:0000837!3.30e-11!165;CL:0002150!5.44e-11!3;CL:0000861!5.44e-11!3;CL:0000037!1.93e-10!172;CL:0000566!1.93e-10!172;CL:0000988!2.34e-10!182;CL:0000763!5.62e-07!112;CL:0000049!5.62e-07!112;CL:0000738!6.00e-07!140;CL:0002031!7.03e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0002127;9.99e-30;1!CL:0000911;9.99e-30;1!CL:0000814;9.99e-30;1!CL:0000945;2.61e-11;24!CL:0000542;4.69e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,9.99e-30,1;CL:0000914,9.99e-30,1;CL:0000911,9.99e-30,1;CL:0000814,9.99e-30,1;CL:0002042,9.99e-30,1;CL:0002039,9.99e-30,1;CL:0002040,9.99e-30,1;CL:0002041,9.99e-30,1;CL:0000893,1.33e-15,2;CL:0002489,1.33e-15,2;CL:0000809,1.33e-15,2;CL:0000808,1.33e-15,2;CL:0000894,1.33e-15,2;CL:0000806,1.33e-15,2;CL:0000807,1.33e-15,2;CL:0000805,1.33e-15,2;CL:0002425,1.33e-15,2;CL:0000945,2.61e-11,24;CL:0000826,2.61e-11,24;CL:0000838,3.30e-09,52;CL:0000542,4.83e-09,53;CL:0000051,4.83e-09,53 | |||
|ontology_enrichment_development_v019=CL:0002425;1.33e-15;2!CL:0000051;4.69e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!5.71e-12!51;DOID:0060083!5.71e-12!51;DOID:1036!4.01e-09!8;DOID:1240!8.72e-09!39;DOID:162!1.13e-08!235;DOID:0050686!1.55e-08!137;DOID:0060058!2.15e-08!10;DOID:14566!2.56e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.07e-26;10!DOID:5093;2.18e-08;4!DOID:1612;2.18e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.07e-26,10;DOID:2531,2.22e-09,51;DOID:0060083,2.22e-09,51;DOID:5093,2.11e-08,4;DOID:1612,2.11e-08,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.82e-08,4;UBERON:0005058,1.82e-08,4;UBERON:0009113,1.82e-08,4;UBERON:0003295,1.82e-08,4;UBERON:0005562,1.82e-08,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,3.17615522379237,2.13253848731132,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57545848628462,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27676806363753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0.317873157960757,0,0.163232808159148,0.282706142867882,0,0,0,0,1.48260564340311,0,0,0,0,0,0,0,0,0,0,0,0,28.7117731081681,0.72581733978073,0,0,0,0,0,0,0,0,0,0,0,0.967563312890852,0.803982487948041,0.574808199372465,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247247575143499,0.0674035438541849,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0.592834895693833,1.70509637733254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.454672189309436,0.535928260312357,0,0,0,0,0,0.558672428662721,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:225620131..225620138,+ | |short_description=p@chr1:225620131..225620138,+ | ||
}} | }} |
Latest revision as of 04:27, 28 July 2015
Short description: | p@chr1:225620131..225620138, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:225620131..225620138, + |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 9.99e-30 | 1 |
immature NK T cell | 9.99e-30 | 1 |
effector T cell | 9.99e-30 | 1 |
mature NK T cell | 9.99e-30 | 1 |
immature NK T cell stage IV | 9.99e-30 | 1 |
immature NK T cell stage I | 9.99e-30 | 1 |
immature NK T cell stage II | 9.99e-30 | 1 |
immature NK T cell stage III | 9.99e-30 | 1 |
thymocyte | 1.33e-15 | 2 |
double negative thymocyte | 1.33e-15 | 2 |
double-positive, alpha-beta thymocyte | 1.33e-15 | 2 |
DN4 thymocyte | 1.33e-15 | 2 |
DN1 thymic pro-T cell | 1.33e-15 | 2 |
DN2 thymocyte | 1.33e-15 | 2 |
DN3 thymocyte | 1.33e-15 | 2 |
immature single positive thymocyte | 1.33e-15 | 2 |
early T lineage precursor | 1.33e-15 | 2 |
lymphocyte of B lineage | 2.61e-11 | 24 |
pro-B cell | 2.61e-11 | 24 |
lymphoid lineage restricted progenitor cell | 3.30e-09 | 52 |
lymphocyte | 4.83e-09 | 53 |
common lymphoid progenitor | 4.83e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.82e-08 | 4 |
hemolymphoid system gland | 1.82e-08 | 4 |
thymic region | 1.82e-08 | 4 |
pharyngeal gland | 1.82e-08 | 4 |
thymus primordium | 1.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.07e-26 | 10 |
hematologic cancer | 2.22e-09 | 51 |
immune system cancer | 2.22e-09 | 51 |
thoracic cancer | 2.11e-08 | 4 |
breast cancer | 2.11e-08 | 4 |