FFCP PHASE1:Hg19::chr1:246151834..246151867,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64754 | |EntrezGene=64754 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15513 | |HGNC=15513 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000488153,ENST00000493441_5end | |association_with_transcript=0bp_to_ENST00000488153,ENST00000493441_5end | ||
|cluster_id=chr1:246151834..246151867,- | |||
|coexpression_cluster_id=C93 | |||
|description=CAGE_peak_4_at_SMYD3_5end | |description=CAGE_peak_4_at_SMYD3_5end | ||
|id=chr1:246151834..246151867,- | |id=chr1:246151834..246151867,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002504;8.17e-21;3!CL:1000279;8.17e-21;3!CL:1000280;8.17e-21;3!CL:0002563;8.38e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,5.41e-21,3;CL:1000279,5.41e-21,3;CL:1000280,5.41e-21,3;CL:0002563,8.53e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!5.58e-11!8;DOID:162!2.80e-09!235;DOID:14566!8.96e-09!239 | |ontology_enrichment_disease=DOID:1036!5.58e-11!8;DOID:162!2.80e-09!235;DOID:14566!8.96e-09!239 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.25e-22;8!DOID:8692;9.95e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.28e-22,8;DOID:162,6.42e-08,235;DOID:8692,6.56e-08,31;DOID:14566,1.13e-07,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001155;2.59e-12;9!UBERON:0000059;4.19e-10;11!UBERON:0000160;2.78e-09;17!UBERON:0001301;1.31e-08;1!UBERON:0001242;8.38e-08;4!UBERON:0001262;8.38e-08;4!UBERON:0004786;8.38e-08;4!UBERON:0004808;8.38e-08;4!UBERON:0001277;8.38e-08;4!UBERON:0005409;3.21e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,2.14e-12,9;UBERON:0000059,3.59e-10,11;UBERON:0000160,2.52e-09,17;UBERON:0001301,1.31e-08,1;UBERON:0001242,8.53e-08,4;UBERON:0001262,8.53e-08,4;UBERON:0004786,8.53e-08,4;UBERON:0004808,8.53e-08,4;UBERON:0001277,8.53e-08,4 | |||
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| ||
|short_description=p4@SMYD3 | |short_description=p4@SMYD3 | ||
}} | }} |
Latest revision as of 22:11, 16 September 2015
Short description: | p4@SMYD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SMYD3_5end |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | 0bp_to_ENST00000488153, ENST00000493441_5end |
EntrezGene: | SMYD3 |
HGNC: | 15513 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 5.41e-21 | 3 |
smooth muscle cell of large intestine | 5.41e-21 | 3 |
smooth muscle cell of colon | 5.41e-21 | 3 |
intestinal epithelial cell | 8.53e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
colon | 2.14e-12 | 9 |
large intestine | 3.59e-10 | 11 |
intestine | 2.52e-09 | 17 |
epididymis | 1.31e-08 | 1 |
intestinal mucosa | 8.53e-08 | 4 |
wall of intestine | 8.53e-08 | 4 |
gastrointestinal system mucosa | 8.53e-08 | 4 |
gastrointestinal system epithelium | 8.53e-08 | 4 |
intestinal epithelium | 8.53e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.28e-22 | 8 |
cancer | 6.42e-08 | 235 |
myeloid leukemia | 6.56e-08 | 31 |
disease of cellular proliferation | 1.13e-07 | 239 |