FFCP PHASE1:Hg19::chr12:97874189..97874200,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:97874189..97874200,+
|short_description=p@chr12:97874189..97874200,+
|description=CAGE_peak_at_chr12:97874189..97874200,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:97874189..97874200,+ | |||
|coexpression_cluster_id=C1023 | |||
|description=CAGE_peak_at_chr12:97874189..97874200,+ | |||
|id=chr12:97874189..97874200,+ | |||
|ontology_enrichment_celltype=CL:0000064!1.67e-07!3;CL:0005012!1.67e-07!3;CL:0000067!1.67e-07!3;CL:0002304!1.67e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.21e-08;3!CL:0000067;1.21e-08;3!CL:0005012;1.21e-08;3!CL:0002304;1.21e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.21e-08,3;CL:0000067,1.21e-08,3;CL:0005012,1.21e-08,3;CL:0002304,1.21e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.58e-45;2!UBERON:0005754;1.19e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;2.59e-12;2!DOID:4236;2.59e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,2.32e-12,2;DOID:4236,2.32e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.72e-17!115;UBERON:0006947!1.45e-15!3;UBERON:0004054!1.45e-15!3;UBERON:0001896!5.27e-14!3;UBERON:0005290!5.27e-14!3;UBERON:0010096!5.27e-14!3;UBERON:0002298!9.05e-14!8;UBERON:0004733!5.97e-13!12;UBERON:0002028!5.97e-13!12;UBERON:0007277!5.97e-13!12;UBERON:0001049!5.26e-12!57;UBERON:0005068!5.26e-12!57;UBERON:0006241!5.26e-12!57;UBERON:0007135!5.26e-12!57;UBERON:0004732!6.55e-12!13;UBERON:0005904!8.65e-12!4;UBERON:0002616!1.65e-11!59;UBERON:0003075!4.10e-11!86;UBERON:0007284!4.10e-11!86;UBERON:0005743!7.27e-11!86;UBERON:0000341!1.38e-10!2;UBERON:0002346!1.84e-10!90;UBERON:0003076!3.03e-10!15;UBERON:0003057!3.03e-10!15;UBERON:0001017!4.59e-10!82;UBERON:0000073!1.61e-09!94;UBERON:0001016!1.61e-09!94;UBERON:0000955!2.82e-09!69;UBERON:0006238!2.82e-09!69;UBERON:0000153!3.04e-09!129;UBERON:0007811!3.04e-09!129;UBERON:0000033!1.26e-07!123;UBERON:0001778!1.67e-07!3;UBERON:0001775!1.67e-07!3;UBERON:0000200!3.45e-07!6;UBERON:0003135!4.02e-07!11;UBERON:0002771!5.96e-07!3;UBERON:0000988!7.36e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.69e-66;3!UBERON:0004054;2.69e-66;3!UBERON:0005904;5.60e-50;4!UBERON:0000998;1.19e-23;1!UBERON:0006868;1.19e-23;1!UBERON:0001000;3.28e-23;1!UBERON:0001301;3.28e-23;1!UBERON:0005352;3.28e-23;1!UBERON:0000058;1.62e-20;10!UBERON:0003135;1.01e-18;11!UBERON:0000341;2.59e-12;2!UBERON:0000007;2.59e-12;2!UBERON:0004175;3.86e-10;21!UBERON:0003101;1.04e-09;22!UBERON:0000079;1.04e-09;22!UBERON:0001778;1.21e-08;3!UBERON:0001775;1.21e-08;3!UBERON:0003296;8.61e-07;4!UBERON:0010133;8.61e-07;4!UBERON:0000488;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,5.88e-66,3;UBERON:0004054,5.88e-66,3;UBERON:0005904,1.01e-49,4;UBERON:0000998,1.07e-23,1;UBERON:0006868,1.07e-23,1;UBERON:0001301,4.10e-23,1;UBERON:0001000,6.40e-23,1;UBERON:0005352,6.40e-23,1;UBERON:0003135,1.24e-18,11;UBERON:0000341,2.07e-12,2;UBERON:0000007,3.24e-12,2;UBERON:0000058,4.37e-11,19;UBERON:0000080,7.96e-11,9;UBERON:0002120,7.96e-11,9;UBERON:0004875,7.96e-11,9;UBERON:0005721,7.96e-11,9;UBERON:0005754,7.96e-11,9;UBERON:0007297,7.96e-11,9;UBERON:0003101,1.16e-09,22;UBERON:0000079,1.16e-09,22;UBERON:0004876,5.00e-09,11;UBERON:0001778,1.21e-08,3;UBERON:0001775,1.21e-08,3;UBERON:0004175,1.41e-08,25;UBERON:0003887,2.37e-08,12;UBERON:0000488,8.61e-07,4;UBERON:0003296,9.63e-07,4;UBERON:0010133,9.63e-07,4 | |||
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|short_description=p@chr12:97874189..97874200,+ | |||
}} | }} |
Latest revision as of 13:58, 24 July 2015
Short description: | p@chr12:97874189..97874200, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:97874189..97874200, + |
Coexpression cluster: | C1023_seminal_ductus_thyroid_pituitary_throat_small_epididymis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.21e-08 | 3 |
ciliated epithelial cell | 1.21e-08 | 3 |
multi-ciliated epithelial cell | 1.21e-08 | 3 |
non-pigmented ciliary epithelial cell | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 5.88e-66 | 3 |
internal male genitalia | 5.88e-66 | 3 |
duct of male reproductive system | 1.01e-49 | 4 |
seminal vesicle | 1.07e-23 | 1 |
seminal fluid secreting gland | 1.07e-23 | 1 |
epididymis | 4.10e-23 | 1 |
vas deferens | 6.40e-23 | 1 |
spermatic cord | 6.40e-23 | 1 |
male reproductive organ | 1.24e-18 | 11 |
throat | 2.07e-12 | 2 |
pituitary gland | 3.24e-12 | 2 |
duct | 4.37e-11 | 19 |
mesonephros | 7.96e-11 | 9 |
pronephros | 7.96e-11 | 9 |
nephrogenic cord | 7.96e-11 | 9 |
pronephric mesoderm | 7.96e-11 | 9 |
rostral part of nephrogenic cord | 7.96e-11 | 9 |
presumptive pronephric mesoderm | 7.96e-11 | 9 |
male organism | 1.16e-09 | 22 |
male reproductive system | 1.16e-09 | 22 |
urogenital ridge | 5.00e-09 | 11 |
ciliary epithelium | 1.21e-08 | 3 |
ciliary body | 1.21e-08 | 3 |
internal genitalia | 1.41e-08 | 25 |
intraembryonic coelom | 2.37e-08 | 12 |
atypical epithelium | 8.61e-07 | 4 |
gland of diencephalon | 9.63e-07 | 4 |
neuroendocrine gland | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 2.32e-12 | 2 |
carcinosarcoma | 2.32e-12 | 2 |