FFCP PHASE1:Hg19::chr6:24923083..24923087,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:24923083..24923087,- | |||
|coexpression_cluster_id=C1976 | |||
|description=CAGE_peak_at_chr6:24923083..24923087,- | |description=CAGE_peak_at_chr6:24923083..24923087,- | ||
|id=chr6:24923083..24923087,- | |id=chr6:24923083..24923087,- | ||
|ontology_enrichment_celltype=CL:0000542!9.74e-30!53;CL:0000051!9.74e-30!53;CL:0000838!3.13e-28!52;CL:0000945!6.33e-27!24;CL:0000826!6.33e-27!24;CL:0002087!4.79e-20!119;CL:0002032!1.30e-18!165;CL:0000837!1.30e-18!165;CL:0000236!1.23e-17!14;CL:0002031!1.38e-17!124;CL:0000738!1.46e-17!140;CL:0000037!2.63e-17!172;CL:0000566!2.63e-17!172;CL:0000988!1.57e-16!182;CL:0000625!8.46e-07!11 | |ontology_enrichment_celltype=CL:0000542!9.74e-30!53;CL:0000051!9.74e-30!53;CL:0000838!3.13e-28!52;CL:0000945!6.33e-27!24;CL:0000826!6.33e-27!24;CL:0002087!4.79e-20!119;CL:0002032!1.30e-18!165;CL:0000837!1.30e-18!165;CL:0000236!1.23e-17!14;CL:0002031!1.38e-17!124;CL:0000738!1.46e-17!140;CL:0000037!2.63e-17!172;CL:0000566!2.63e-17!172;CL:0000988!1.57e-16!182;CL:0000625!8.46e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.16e-28;13!CL:0000945;3.71e-15;24!CL:0000542;7.88e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.99e-26,14;CL:0000945,3.44e-15,24;CL:0000826,3.44e-15,24;CL:0000838,3.86e-09,52;CL:0000542,5.91e-09,53;CL:0000051,5.91e-09,53 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.32e-11;1!CL:0000051;7.88e-08;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.46e-11!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.51e-11!15;UBERON:0000179!1.51e-11!15;UBERON:0000463!1.51e-11!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.61e-44;15!UBERON:0000179;1.61e-44;15!UBERON:0000463;1.61e-44;15!UBERON:0002390;2.48e-19;32!UBERON:0001154;1.32e-11;1!UBERON:0001153;1.32e-11;1!UBERON:0009854;1.32e-11;1!UBERON:0002193;3.69e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.86e-44,15;UBERON:0000179,1.86e-44,15;UBERON:0000463,1.86e-44,15;UBERON:0001154,9.61e-12,1;UBERON:0001153,9.61e-12,1;UBERON:0001045,9.61e-12,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0.426507697462265,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0.39783335439818,0,1.75996244461323,1.63841583378639,2.66852776159066,1.28019066769952,1.60158394814405,0.574752439954483,0.661044872784862,3.81621501814146,0.569212969109448,0,0,0,0,0,0,0,0.205601498999509,0.334372990781356,0,0,0,0,0,0,0,0.25618263945135,0.390178042679635,1.31550323682941,0.552700035571697,0.289803085735052,0.593146252648242,0,1.04535523804977,0.793165398882963,0,0,0.253019692019503,0.95569624297229,2.60433381542567,0,0.451725357233318,0.639933055772092,0,0.710331756132051,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0.749007023947182,5.9832291840805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,2.53723804616085,3.0585488285695,10.2536493691349,2.1440859791201,3.29089818468955,3.8908398671563,4.86028293514303,7.9312517629427,0,0.962479855263359,0,0.557409525377156,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.664846727600626,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0.992332043623902,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0.187967835959707,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0.426507697462265,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0.39783335439818,0,1.75996244461323,1.63841583378639,2.66852776159066,1.28019066769952,1.60158394814405,0.574752439954483,0.661044872784862,3.81621501814146,0.569212969109448,0,0,0,0,0,0,0,0.205601498999509,0.334372990781356,0,0,0,0,0,0,0,0.25618263945135,0.390178042679635,1.31550323682941,0.552700035571697,0.289803085735052,0.593146252648242,0,1.04535523804977,0.793165398882963,0,0,0.253019692019503,0.95569624297229,2.60433381542567,0,0.451725357233318,0.639933055772092,0,0.710331756132051,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0.749007023947182,5.9832291840805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,2.53723804616085,3.0585488285695,10.2536493691349,2.1440859791201,3.29089818468955,3.8908398671563,4.86028293514303,7.9312517629427,0,0.962479855263359,0,0.557409525377156,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.664846727600626,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0.992332043623902,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0.187967835959707,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p@chr6:24923083..24923087,- | |short_description=p@chr6:24923083..24923087,- | ||
}} | }} |
Latest revision as of 22:48, 30 July 2015
Short description: | p@chr6:24923083..24923087, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:24923083..24923087, - |
Coexpression cluster: | C1976_Neutrophils_Whole_Eosinophils_CD8_CD19_CD4_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.99e-26 | 14 |
lymphocyte of B lineage | 3.44e-15 | 24 |
pro-B cell | 3.44e-15 | 24 |
lymphoid lineage restricted progenitor cell | 3.86e-09 | 52 |
lymphocyte | 5.91e-09 | 53 |
common lymphoid progenitor | 5.91e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
blood | 1.86e-44 | 15 |
haemolymphatic fluid | 1.86e-44 | 15 |
organism substance | 1.86e-44 | 15 |
vermiform appendix | 9.61e-12 | 1 |
caecum | 9.61e-12 | 1 |
midgut | 9.61e-12 | 1 |