FFCP PHASE1:Hg19::chr20:48809000..48809053,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1051 | |EntrezGene=1051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1834 | |HGNC=1834 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=161bp_to_M98056_5end | |association_with_transcript=161bp_to_M98056_5end | ||
|cluster_id=chr20:48809000..48809053,+ | |||
|coexpression_cluster_id=C244 | |||
|description=CAGE_peak_12_at_CEBPB_5end | |description=CAGE_peak_12_at_CEBPB_5end | ||
|id=chr20:48809000..48809053,+ | |id=chr20:48809000..48809053,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.93e-21!42;CL:0000766!3.28e-21!76;CL:0002194!7.84e-21!63;CL:0000576!7.84e-21!63;CL:0000040!7.84e-21!63;CL:0000559!7.84e-21!63;CL:0000860!2.86e-20!45;CL:0002009!4.28e-19!65;CL:0000839!3.13e-18!70;CL:0000557!2.50e-16!71;CL:0000763!1.34e-09!112;CL:0000049!1.34e-09!112 | |ontology_enrichment_celltype=CL:0002057!2.93e-21!42;CL:0000766!3.28e-21!76;CL:0002194!7.84e-21!63;CL:0000576!7.84e-21!63;CL:0000040!7.84e-21!63;CL:0000559!7.84e-21!63;CL:0000860!2.86e-20!45;CL:0002009!4.28e-19!65;CL:0000839!3.13e-18!70;CL:0000557!2.50e-16!71;CL:0000763!1.34e-09!112;CL:0000049!1.34e-09!112 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.17e-29;33!CL:0002057;1.17e-29;33!CL:0000473;3.00e-27;39!CL:0000234;3.00e-27;39!CL:0000576;2.60e-15;48!CL:0000766;3.73e-14;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.01e-32,48;CL:0000234,1.01e-32,48;CL:0000860,2.59e-29,42;CL:0002057,2.59e-29,42;CL:0000766,3.98e-29,72;CL:0002194,3.38e-27,59;CL:0000576,3.38e-27,59;CL:0000040,3.38e-27,59;CL:0000559,3.38e-27,59;CL:0002009,8.29e-26,61;CL:0000839,1.02e-22,66;CL:0000557,3.71e-22,67;CL:0000763,1.54e-14,108;CL:0000049,1.54e-14,108;CL:0000738,4.53e-11,136;CL:0002087,1.68e-10,115;CL:0002031,6.28e-09,120;CL:0002032,4.93e-07,161;CL:0000837,4.93e-07,161;CL:0000094,8.35e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.31e-22;42 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.57e-14!80;UBERON:0001474!1.50e-13!86;UBERON:0002390!6.75e-13!102;UBERON:0003061!6.75e-13!102;UBERON:0002405!1.02e-11!115;UBERON:0002193!1.20e-10!112;UBERON:0004765!1.15e-09!101;UBERON:0001434!1.15e-09!101;UBERON:0000062!4.83e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.21e-19,76;UBERON:0001474,1.18e-17,82;UBERON:0004765,1.16e-15,90;UBERON:0002390,6.55e-15,98;UBERON:0003061,6.55e-15,98;UBERON:0002405,1.20e-14,93;UBERON:0001434,2.24e-13,100;UBERON:0002193,5.90e-13,108 | |||
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| ||
|short_description=p12@CEBPB | |short_description=p12@CEBPB | ||
}} | }} |
Latest revision as of 21:01, 16 September 2015
Short description: | p12@CEBPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CEBPB_5end |
Coexpression cluster: | C244_CD14_Monocytederived_Hepatocyte_heart_Neutrophils_acute_Macrophage |
Association with transcript: | 161bp_to_M98056_5end |
EntrezGene: | CEBPB |
HGNC: | 1834 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.01e-32 | 48 |
phagocyte | 1.01e-32 | 48 |
classical monocyte | 2.59e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.59e-29 | 42 |
myeloid leukocyte | 3.98e-29 | 72 |
monopoietic cell | 3.38e-27 | 59 |
monocyte | 3.38e-27 | 59 |
monoblast | 3.38e-27 | 59 |
promonocyte | 3.38e-27 | 59 |
macrophage dendritic cell progenitor | 8.29e-26 | 61 |
myeloid lineage restricted progenitor cell | 1.02e-22 | 66 |
granulocyte monocyte progenitor cell | 3.71e-22 | 67 |
myeloid cell | 1.54e-14 | 108 |
common myeloid progenitor | 1.54e-14 | 108 |
leukocyte | 4.53e-11 | 136 |
nongranular leukocyte | 1.68e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 6.28e-09 | 120 |
hematopoietic oligopotent progenitor cell | 4.93e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.93e-07 | 161 |
granulocyte | 8.35e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.21e-19 | 76 |
bone element | 1.18e-17 | 82 |
skeletal element | 1.16e-15 | 90 |
hematopoietic system | 6.55e-15 | 98 |
blood island | 6.55e-15 | 98 |
immune system | 1.20e-14 | 93 |
skeletal system | 2.24e-13 | 100 |
hemolymphoid system | 5.90e-13 | 108 |