FFCP PHASE1:Hg19::chr13:36429829..36429838,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:36429829..36429838,-
|short_description=p10@DCLK1
|description=CAGE_peak_10_at_DCLK1_5end
|association_with_transcript=39bp_to_uc001uve.3,uc001uvh.3,uc010...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9201 | |EntrezGene=9201 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2700 | |HGNC=2700 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=39bp_to_uc001uve.3,uc001uvh.3,uc010abk.2,uc010teh.1_5end | |||
|cluster_id=chr13:36429829..36429838,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_10_at_DCLK1_5end | |||
|id=chr13:36429829..36429838,- | |||
|ontology_enrichment_celltype=CL:0002322!2.72e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;7.56e-15;5!CL:0000540;6.42e-08;6!CL:0000404;6.42e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.04e-15,5;CL:0000047,1.10e-08,8;CL:0000540,8.21e-08,6;CL:0000031,8.21e-08,6;CL:0000404,8.21e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.29e-12;82!UBERON:0006215;4.46e-09;3!CL:0000031;6.42e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!8.21e-55!86;UBERON:0001017!9.16e-55!82;UBERON:0001049!1.26e-52!57;UBERON:0005068!1.26e-52!57;UBERON:0006241!1.26e-52!57;UBERON:0007135!1.26e-52!57;UBERON:0000073!2.87e-51!94;UBERON:0001016!2.87e-51!94;UBERON:0000955!1.92e-47!69;UBERON:0006238!1.92e-47!69;UBERON:0002780!2.21e-47!41;UBERON:0001890!2.21e-47!41;UBERON:0006240!2.21e-47!41;UBERON:0003080!6.03e-46!42;UBERON:0002616!1.11e-45!59;UBERON:0002020!8.20e-41!34;UBERON:0003528!8.20e-41!34;UBERON:0001893!1.04e-40!34;UBERON:0007023!2.62e-39!115;UBERON:0002791!3.90e-39!33;UBERON:0001869!1.34e-38!32;UBERON:0003075!1.23e-36!86;UBERON:0007284!1.23e-36!86;UBERON:0002346!3.22e-34!90;UBERON:0002619!4.77e-31!22;UBERON:0003056!1.27e-30!61;UBERON:0000956!9.70e-29!25;UBERON:0000203!9.70e-29!25;UBERON:0001950!2.93e-28!20;UBERON:0000033!2.27e-26!123;UBERON:0000153!2.19e-25!129;UBERON:0007811!2.19e-25!129;UBERON:0004121!7.91e-25!169;UBERON:0000924!9.08e-24!173;UBERON:0006601!9.08e-24!173;UBERON:0000025!3.54e-15!194;UBERON:0004111!2.40e-14!241;UBERON:0002420!1.65e-13!9;UBERON:0007245!1.65e-13!9;UBERON:0010009!1.65e-13!9;UBERON:0010011!1.65e-13!9;UBERON:0000454!1.65e-13!9;UBERON:0002308!1.81e-13!9;UBERON:0000125!1.81e-13!9;UBERON:0000477!2.05e-11!286;UBERON:0009663!9.39e-11!7;UBERON:0000475!1.34e-10!365;UBERON:0000200!1.39e-10!6;UBERON:0001871!1.18e-09!7;UBERON:0002021!7.52e-09!5;UBERON:0001872!1.13e-08!5;UBERON:0000349!1.14e-08!5;UBERON:0003076!1.31e-08!15;UBERON:0003057!1.31e-08!15;UBERON:0000064!1.68e-08!219;UBERON:0004732!2.23e-08!13;UBERON:0000468!3.29e-08!659;UBERON:0000483!5.06e-08!309;UBERON:0001894!5.52e-08!7;UBERON:0006222!5.52e-08!7;UBERON:0000119!9.02e-08!312;UBERON:0000369!2.30e-07!4;UBERON:0002435!2.30e-07!4;UBERON:0000204!2.30e-07!4;UBERON:0010082!2.30e-07!4;UBERON:0004733!2.58e-07!12;UBERON:0002028!2.58e-07!12;UBERON:0007277!2.58e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.31e-56;22!UBERON:0001869;1.29e-55;32!UBERON:0003528;2.44e-54;34!UBERON:0002020;2.44e-54;34!UBERON:0002791;1.04e-51;32!UBERON:0001950;2.17e-50;20!UBERON:0001893;4.12e-50;34!UBERON:0002780;2.97e-49;41!UBERON:0001890;2.97e-49;41!UBERON:0000956;1.01e-48;25!UBERON:0000203;1.01e-48;25!UBERON:0000073;6.37e-47;53!UBERON:0002616;6.37e-47;53!UBERON:0000955;1.46e-31;68!UBERON:0001017;2.21e-29;75!UBERON:0001016;7.89e-25;83!UBERON:0000200;2.34e-19;6!UBERON:0004732;2.17e-16;13!UBERON:0002420;2.46e-16;9!UBERON:0007245;2.46e-16;9!UBERON:0010009;2.46e-16;9!UBERON:0010011;2.46e-16;9!UBERON:0000454;2.46e-16;9!UBERON:0000125;3.18e-16;9!UBERON:0002308;3.18e-16;9!UBERON:0002021;4.39e-16;5!UBERON:0001872;8.64e-16;5!UBERON:0000349;1.29e-15;5!UBERON:0004733;3.04e-14;12!UBERON:0002028;3.04e-14;12!UBERON:0007023;2.65e-12;114!UBERON:0002298;3.49e-12;6!UBERON:0001871;3.27e-11;6!UBERON:0009663;3.49e-11;7!UBERON:0002680;3.73e-11;9!UBERON:0001895;3.73e-11;9!UBERON:0001894;1.58e-10;7!UBERON:0001870;1.66e-10;3!UBERON:0000988;1.08e-09;3!UBERON:0011216;1.14e-08;132!UBERON:0000369;3.18e-08;4!UBERON:0002435;3.18e-08;4!UBERON:0000204;3.18e-08;4!UBERON:0002702;1.78e-07;2!UBERON:0002771;2.18e-07;2!UBERON:0003296;2.23e-07;4!UBERON:0010133;2.23e-07;4!UBERON:0001876;3.27e-07;2!UBERON:0001954;4.58e-07;2!UBERON:0002148;4.58e-07;2!UBERON:0006331;4.58e-07;2!UBERON:0009662;4.58e-07;2!UBERON:0003022;4.58e-07;2!UBERON:0002421;4.58e-07;2!UBERON:0002600;4.58e-07;2!UBERON:0000007;7.77e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.83e-82,53;UBERON:0002616,3.83e-82,53;UBERON:0001049,3.19e-81,56;UBERON:0005068,3.19e-81,56;UBERON:0006241,3.19e-81,56;UBERON:0007135,3.19e-81,56;UBERON:0001017,1.50e-77,81;UBERON:0001016,8.93e-72,89;UBERON:0002780,8.83e-69,41;UBERON:0001890,8.83e-69,41;UBERON:0003080,8.83e-69,41;UBERON:0006240,8.83e-69,41;UBERON:0000955,4.04e-68,68;UBERON:0006238,4.04e-68,68;UBERON:0003528,1.18e-63,34;UBERON:0002020,1.18e-63,34;UBERON:0001869,2.27e-63,32;UBERON:0001893,2.64e-59,34;UBERON:0002791,2.81e-58,32;UBERON:0002619,1.04e-55,22;UBERON:0003075,4.29e-55,82;UBERON:0007284,4.29e-55,82;UBERON:0002346,4.75e-52,86;UBERON:0001950,3.52e-50,20;UBERON:0000956,1.37e-48,25;UBERON:0000203,1.37e-48,25;UBERON:0003056,1.49e-46,61;UBERON:0010371,3.16e-41,104;UBERON:0007023,1.17e-37,114;UBERON:0004121,4.34e-32,171;UBERON:0000924,4.34e-32,171;UBERON:0006601,4.34e-32,171;UBERON:0010314,5.25e-32,132;UBERON:0011216,1.71e-25,223;UBERON:0000025,7.11e-20,192;UBERON:0000200,2.07e-19,6;UBERON:0004732,2.09e-16,13;UBERON:0002420,3.26e-16,9;UBERON:0007245,3.26e-16,9;UBERON:0010009,3.26e-16,9;UBERON:0010011,3.26e-16,9;UBERON:0000454,3.26e-16,9;UBERON:0000125,3.75e-16,9;UBERON:0002308,3.75e-16,9;UBERON:0002021,5.55e-16,5;UBERON:0001872,1.23e-15,5;UBERON:0000349,1.27e-15,5;UBERON:0004111,1.38e-15,240;UBERON:0004733,2.96e-14,12;UBERON:0002028,2.96e-14,12;UBERON:0007277,2.96e-14,12;UBERON:0003076,5.59e-14,15;UBERON:0003057,5.59e-14,15;UBERON:0002298,4.51e-12,6;UBERON:0002680,3.04e-11,9;UBERON:0001895,3.04e-11,9;UBERON:0010092,3.04e-11,9;UBERON:0001871,3.07e-11,6;UBERON:0009663,4.14e-11,7;UBERON:0001894,1.16e-10,7;UBERON:0006222,1.16e-10,7;UBERON:0001870,1.61e-10,3;UBERON:0000988,1.12e-09,3;UBERON:0000483,3.56e-09,306;UBERON:0000119,5.52e-09,309;UBERON:0000369,3.22e-08,4;UBERON:0002435,3.22e-08,4;UBERON:0000204,3.22e-08,4;UBERON:0010082,3.22e-08,4;UBERON:0002702,1.75e-07,2;UBERON:0003296,1.81e-07,4;UBERON:0010133,1.81e-07,4;UBERON:0002771,1.99e-07,2;UBERON:0000922,3.56e-07,592;UBERON:0001876,3.70e-07,2;UBERON:0001954,3.94e-07,2;UBERON:0003022,3.94e-07,2;UBERON:0002421,3.94e-07,2;UBERON:0002600,3.94e-07,2;UBERON:0002148,4.45e-07,2;UBERON:0006331,4.45e-07,2;UBERON:0009662,4.45e-07,2;UBERON:0000007,5.85e-07,2 | |||
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| ||
|short_description=p10@DCLK1 | |||
}} | }} |
Latest revision as of 05:26, 17 September 2015
Short description: | p10@DCLK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_DCLK1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 39bp_to_uc001uve.3, uc001uvh.3, uc010abk.2, uc010teh.1_5end |
EntrezGene: | DCLK1 |
HGNC: | 2700 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.04e-15 | 5 |
neuronal stem cell | 1.10e-08 | 8 |
neuron | 8.21e-08 | 6 |
neuroblast | 8.21e-08 | 6 |
electrically signaling cell | 8.21e-08 | 6 |