FFCP PHASE1:Hg19::chr13:46711340..46711345,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:46711340..46711345,-
|short_description=p@chr13:46711340..46711345,-
|description=CAGE_peak_at_chr13:46711340..46711345,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:46711340..46711345,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr13:46711340..46711345,- | |||
|id=chr13:46711340..46711345,- | |||
|ontology_enrichment_celltype=CL:0000037!2.55e-64!172;CL:0000566!2.55e-64!172;CL:0000988!1.42e-63!182;CL:0000738!3.22e-63!140;CL:0002032!1.62e-60!165;CL:0000837!1.62e-60!165;CL:0002087!2.89e-56!119;CL:0002031!4.46e-48!124;CL:0000542!6.45e-30!53;CL:0000051!6.45e-30!53;CL:0000763!5.29e-29!112;CL:0000049!5.29e-29!112;CL:0000838!9.06e-29!52;CL:0002057!8.71e-28!42;CL:0000766!2.29e-27!76;CL:0000860!3.79e-25!45;CL:0002194!1.06e-22!63;CL:0000576!1.06e-22!63;CL:0000040!1.06e-22!63;CL:0000559!1.06e-22!63;CL:0002009!1.32e-21!65;CL:0000839!2.64e-20!70;CL:0000557!7.77e-20!71;CL:0000084!2.34e-16!25;CL:0000827!2.34e-16!25;CL:0000134!1.91e-15!358;CL:0002320!1.39e-14!365;CL:0000219!1.31e-11!390;CL:0000791!3.09e-11!18;CL:0000789!3.09e-11!18;CL:0002420!3.09e-11!18;CL:0002419!3.09e-11!18;CL:0000790!3.09e-11!18;CL:0000945!4.68e-11!24;CL:0000826!4.68e-11!24;CL:0000048!1.37e-08!430;CL:0000094!2.40e-08!8;CL:0000723!4.09e-08!436;CL:0000034!1.65e-07!444;CL:0000081!2.35e-07!11;CL:0000080!3.37e-07!6;CL:0000625!8.45e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.02e-20;33!CL:0002057;5.02e-20;33!CL:0000473;4.80e-16;39!CL:0000234;4.80e-16;39!CL:0000576;7.91e-14;48!CL:0000775;7.91e-12;3!CL:0000766;1.77e-11;69!CL:0000094;1.31e-09;8!CL:0000081;4.14e-07;11!CL:0000763;8.36e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.33e-24,42;CL:0002057,2.33e-24,42;CL:0000766,3.16e-21,72;CL:0000738,3.17e-21,136;CL:0000473,4.70e-21,48;CL:0000234,4.70e-21,48;CL:0000037,2.11e-18,168;CL:0002032,2.37e-17,161;CL:0000837,2.37e-17,161;CL:0000988,2.81e-17,177;CL:0002194,2.01e-16,59;CL:0000576,2.01e-16,59;CL:0000040,2.01e-16,59;CL:0000559,2.01e-16,59;CL:0002087,5.98e-16,115;CL:0002009,7.94e-16,61;CL:0000763,2.45e-15,108;CL:0000049,2.45e-15,108;CL:0002031,3.67e-15,120;CL:0000839,1.73e-14,66;CL:0000557,3.03e-14,67;CL:0000775,7.91e-12,3;CL:0000094,1.20e-09,8;CL:0000081,3.90e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-19;42!UBERON:0005425;7.55e-09;1 | |||
|ontology_enrichment_disease=DOID:2531!5.84e-15!51;DOID:0060083!5.84e-15!51;DOID:0060058!3.16e-11!10;DOID:1240!2.27e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:0060060;7.55e-09;1!DOID:0060061;7.55e-09;1!DOID:8691;7.55e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,8.49e-09,1;DOID:0060061,8.49e-09,1;DOID:8691,8.49e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.62e-33!102;UBERON:0003061!2.62e-33!102;UBERON:0002193!1.28e-29!112;UBERON:0002371!2.48e-18!80;UBERON:0001474!3.90e-16!86;UBERON:0002405!2.04e-14!115;UBERON:0002384!2.02e-13!375;UBERON:0000178!8.37e-13!15;UBERON:0000179!8.37e-13!15;UBERON:0000463!8.37e-13!15;UBERON:0004765!7.10e-12!101;UBERON:0001434!7.10e-12!101;UBERON:0003081!9.46e-08!216;UBERON:0004177!5.55e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.55e-09;1!UBERON:0001785;7.55e-09;1!UBERON:0002464;7.55e-09;1!UBERON:0004904;7.55e-09;1!UBERON:0001021;7.55e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.08e-12,98;UBERON:0003061,1.08e-12,98;UBERON:0002371,2.47e-12,76;UBERON:0002193,2.71e-11,108;UBERON:0001474,2.74e-11,82;UBERON:0004765,4.11e-10,90;UBERON:0002405,1.01e-09,93;UBERON:0001434,6.65e-09,100;UBERON:0000941,6.72e-09,1;UBERON:0001785,6.72e-09,1;UBERON:0002464,6.72e-09,1;UBERON:0004904,6.72e-09,1;UBERON:0001021,6.72e-09,1;UBERON:0003902,6.72e-09,1;UBERON:0005425,6.72e-09,1 | |||
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|short_description=p@chr13:46711340..46711345,- | |||
}} | }} |
Latest revision as of 16:22, 24 July 2015
Short description: | p@chr13:46711340..46711345, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:46711340..46711345, - |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.33e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.33e-24 | 42 |
myeloid leukocyte | 3.16e-21 | 72 |
leukocyte | 3.17e-21 | 136 |
defensive cell | 4.70e-21 | 48 |
phagocyte | 4.70e-21 | 48 |
hematopoietic stem cell | 2.11e-18 | 168 |
hematopoietic oligopotent progenitor cell | 2.37e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.37e-17 | 161 |
hematopoietic cell | 2.81e-17 | 177 |
monopoietic cell | 2.01e-16 | 59 |
monocyte | 2.01e-16 | 59 |
monoblast | 2.01e-16 | 59 |
promonocyte | 2.01e-16 | 59 |
nongranular leukocyte | 5.98e-16 | 115 |
macrophage dendritic cell progenitor | 7.94e-16 | 61 |
myeloid cell | 2.45e-15 | 108 |
common myeloid progenitor | 2.45e-15 | 108 |
hematopoietic lineage restricted progenitor cell | 3.67e-15 | 120 |
myeloid lineage restricted progenitor cell | 1.73e-14 | 66 |
granulocyte monocyte progenitor cell | 3.03e-14 | 67 |
neutrophil | 7.91e-12 | 3 |
granulocyte | 1.20e-09 | 8 |
blood cell | 3.90e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.08e-12 | 98 |
blood island | 1.08e-12 | 98 |
bone marrow | 2.47e-12 | 76 |
hemolymphoid system | 2.71e-11 | 108 |
bone element | 2.74e-11 | 82 |
skeletal element | 4.11e-10 | 90 |
immune system | 1.01e-09 | 93 |
skeletal system | 6.65e-09 | 100 |
cranial nerve II | 6.72e-09 | 1 |
cranial nerve | 6.72e-09 | 1 |
nerve trunk | 6.72e-09 | 1 |
nerve connecting eye with brain | 6.72e-09 | 1 |
nerve | 6.72e-09 | 1 |
retinal neural layer | 6.72e-09 | 1 |
presumptive neural retina | 6.72e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 8.49e-09 | 1 |
cutaneous T cell lymphoma | 8.49e-09 | 1 |
mycosis fungoides | 8.49e-09 | 1 |