FFCP PHASE1:Hg19::chr21:47575483..47575499,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10841 | |EntrezGene=10841 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3974 | |HGNC=3974 | ||
|TSSclassifier=strong | |||
|UniProt=O95954,B7WPK3 | |UniProt=O95954,B7WPK3 | ||
|association_with_transcript=-2bp_to_ENST00000291670,ENST00000355384,ENST00000359679,ENST00000397743,ENST00000397746,ENST00000397748,ENST00000498355,NM_006657,NM_206965,uc002zif.2,uc002zig.2,uc002zih.2,uc010gqf.2,uc010gqg.1_5end | |association_with_transcript=-2bp_to_ENST00000291670,ENST00000355384,ENST00000359679,ENST00000397743,ENST00000397746,ENST00000397748,ENST00000498355,NM_006657,NM_206965,uc002zif.2,uc002zig.2,uc002zih.2,uc010gqf.2,uc010gqg.1_5end | ||
|cluster_id=chr21:47575483..47575499,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_FTCD_5end | |description=CAGE_peak_1_at_FTCD_5end | ||
|id=chr21:47575483..47575499,- | |id=chr21:47575483..47575499,- | ||
|ontology_enrichment_celltype=CL:0000181!4.92e-18!12;CL:0000417!4.92e-18!12;CL:0000668!4.92e-18!12;CL:0000414!4.92e-18!12;CL:0000412!4.92e-18!12;CL:0000182!4.92e-18!12;CL:0002322!3.37e-08!5 | |ontology_enrichment_celltype=CL:0000181!4.92e-18!12;CL:0000417!4.92e-18!12;CL:0000668!4.92e-18!12;CL:0000414!4.92e-18!12;CL:0000412!4.92e-18!12;CL:0000182!4.92e-18!12;CL:0002322!3.37e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.01e-34;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.01e-34,12;CL:0000223,2.03e-10,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.81e-27;11!UBERON:0009497;5.04e-23;13!UBERON:0003104;1.37e-16;31!UBERON:0001041;1.01e-09;30!CL:0000223;8.35e-08;58 | |||
|ontology_enrichment_disease=DOID:114!1.55e-09!2 | |ontology_enrichment_disease=DOID:114!1.55e-09!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.25e-18!19;UBERON:0006925!3.25e-18!19;UBERON:0008836!3.25e-18!19;UBERON:0005057!9.08e-16!26;UBERON:0008835!1.71e-15!22;UBERON:0003894!1.71e-15!22;UBERON:0005172!6.43e-15!55;UBERON:0005173!6.43e-15!55;UBERON:0009854!9.56e-15!23;UBERON:0007499!1.99e-13!25;UBERON:0009497!1.99e-13!25;UBERON:0000015!1.99e-13!25;UBERON:0002423!1.99e-13!25;UBERON:0006235!1.99e-13!25;UBERON:0004161!1.99e-13!25;UBERON:0002417!4.12e-13!61;UBERON:0000916!4.12e-13!61;UBERON:0009856!7.60e-13!26;UBERON:0000160!9.56e-11!27;UBERON:0002365!1.69e-10!31;UBERON:0002330!1.69e-10!31;UBERON:0005409!6.24e-10!35;UBERON:0003929!1.41e-09!54;UBERON:0002368!4.17e-09!35;UBERON:0004921!7.44e-09!129;UBERON:0004185!7.44e-09!129;UBERON:0000949!2.91e-08!45;UBERON:0005177!4.90e-07!107 | |ontology_enrichment_uberon=UBERON:0002107!3.25e-18!19;UBERON:0006925!3.25e-18!19;UBERON:0008836!3.25e-18!19;UBERON:0005057!9.08e-16!26;UBERON:0008835!1.71e-15!22;UBERON:0003894!1.71e-15!22;UBERON:0005172!6.43e-15!55;UBERON:0005173!6.43e-15!55;UBERON:0009854!9.56e-15!23;UBERON:0007499!1.99e-13!25;UBERON:0009497!1.99e-13!25;UBERON:0000015!1.99e-13!25;UBERON:0002423!1.99e-13!25;UBERON:0006235!1.99e-13!25;UBERON:0004161!1.99e-13!25;UBERON:0002417!4.12e-13!61;UBERON:0000916!4.12e-13!61;UBERON:0009856!7.60e-13!26;UBERON:0000160!9.56e-11!27;UBERON:0002365!1.69e-10!31;UBERON:0002330!1.69e-10!31;UBERON:0005409!6.24e-10!35;UBERON:0003929!1.41e-09!54;UBERON:0002368!4.17e-09!35;UBERON:0004921!7.44e-09!129;UBERON:0004185!7.44e-09!129;UBERON:0000949!2.91e-08!45;UBERON:0005177!4.90e-07!107 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.77e-35;19!UBERON:0006925;5.77e-35;19!UBERON:0002423;2.82e-26;25!UBERON:0002365;2.50e-20;31!UBERON:0002330;2.50e-20;31!UBERON:0002368;7.97e-18;33!UBERON:0000949;8.68e-13;43!UBERON:0005172;7.38e-12;52!UBERON:0005173;7.38e-12;52!UBERON:0002417;8.58e-10;58!UBERON:0000916;8.58e-10;58!UBERON:0001301;1.83e-09;1!UBERON:0002530;4.34e-08;57!UBERON:0002108;2.05e-07;4!UBERON:0001007;5.20e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.77e-35,19;UBERON:0006925,5.77e-35,19;UBERON:0008836,5.77e-35,19;UBERON:0008835,4.97e-30,22;UBERON:0003894,4.97e-30,22;UBERON:0009854,1.14e-28,23;UBERON:0007499,2.82e-26,25;UBERON:0009497,2.82e-26,25;UBERON:0000015,2.82e-26,25;UBERON:0002423,2.82e-26,25;UBERON:0006235,2.82e-26,25;UBERON:0004161,2.82e-26,25;UBERON:0009856,3.23e-25,26;UBERON:0002365,6.05e-21,31;UBERON:0002330,6.05e-21,31;UBERON:0005172,1.72e-20,54;UBERON:0005173,1.72e-20,54;UBERON:0002368,2.10e-18,35;UBERON:0002417,3.08e-18,60;UBERON:0000916,3.08e-18,60;UBERON:0003929,4.34e-17,54;UBERON:0000949,5.06e-14,45;UBERON:0002530,9.02e-13,59;UBERON:0005911,1.23e-10,82;UBERON:0005177,5.27e-10,101;UBERON:0004921,1.21e-09,118;UBERON:0001301,1.91e-09,1;UBERON:0009569,8.05e-09,112;UBERON:0001007,1.91e-07,145;UBERON:0001555,1.91e-07,145;UBERON:0007026,1.91e-07,145;UBERON:0002108,2.02e-07,4 | |||
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| ||
|short_description=p1@FTCD | |short_description=p1@FTCD | ||
}} | }} |
Latest revision as of 23:19, 18 September 2015
Short description: | p1@FTCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FTCD_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -2bp_to_ENST00000291670, ENST00000355384, ENST00000359679, ENST00000397743, ENST00000397746, ENST00000397748, ENST00000498355, NM_006657, NM_206965, uc002zif.2, uc002zig.2, uc002zih.2, uc010gqf.2, uc010gqg.1_5end |
EntrezGene: | FTCD |
HGNC: | 3974 |
UniProt: | O95954B7WPK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.01e-34 | 12 |
endodermal cell | 2.03e-10 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 5.77e-35 | 19 |
digestive gland | 5.77e-35 | 19 |
liver bud | 5.77e-35 | 19 |
hepatic diverticulum | 4.97e-30 | 22 |
liver primordium | 4.97e-30 | 22 |
digestive tract diverticulum | 1.14e-28 | 23 |
epithelial sac | 2.82e-26 | 25 |
epithelium of foregut-midgut junction | 2.82e-26 | 25 |
anatomical boundary | 2.82e-26 | 25 |
hepatobiliary system | 2.82e-26 | 25 |
foregut-midgut junction | 2.82e-26 | 25 |
septum transversum | 2.82e-26 | 25 |
sac | 3.23e-25 | 26 |
exocrine gland | 6.05e-21 | 31 |
exocrine system | 6.05e-21 | 31 |
abdomen element | 1.72e-20 | 54 |
abdominal segment element | 1.72e-20 | 54 |
endocrine gland | 2.10e-18 | 35 |
abdominal segment of trunk | 3.08e-18 | 60 |
abdomen | 3.08e-18 | 60 |
gut epithelium | 4.34e-17 | 54 |
endocrine system | 5.06e-14 | 45 |
gland | 9.02e-13 | 59 |
endo-epithelium | 1.23e-10 | 82 |
trunk region element | 5.27e-10 | 101 |
subdivision of digestive tract | 1.21e-09 | 118 |
epididymis | 1.91e-09 | 1 |
subdivision of trunk | 8.05e-09 | 112 |
digestive system | 1.91e-07 | 145 |
digestive tract | 1.91e-07 | 145 |
primitive gut | 1.91e-07 | 145 |
small intestine | 2.02e-07 | 4 |