FFCP PHASE1:Hg19::chr22:37259144..37259156,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:37259144..37259156,+ | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr22:37259144..37259156,+ | |description=CAGE_peak_at_chr22:37259144..37259156,+ | ||
|id=chr22:37259144..37259156,+ | |id=chr22:37259144..37259156,+ | ||
|ontology_enrichment_celltype=CL:0002127!4.53e-14!1;CL:0000914!4.53e-14!1;CL:0000911!4.53e-14!1;CL:0000814!4.53e-14!1;CL:0002042!4.53e-14!1;CL:0002039!4.53e-14!1;CL:0002040!4.53e-14!1;CL:0002041!4.53e-14!1;CL:0000945!4.40e-13!24;CL:0000826!4.40e-13!24;CL:0000838!2.72e-11!52;CL:0000542!4.55e-11!53;CL:0000051!4.55e-11!53;CL:0002032!2.39e-09!165;CL:0000837!2.39e-09!165;CL:0000037!6.62e-09!172;CL:0000566!6.62e-09!172;CL:0000988!2.49e-08!182;CL:0000893!1.12e-07!2;CL:0002489!1.12e-07!2;CL:0000809!1.12e-07!2;CL:0000808!1.12e-07!2;CL:0000894!1.12e-07!2;CL:0000806!1.12e-07!2;CL:0000807!1.12e-07!2;CL:0000805!1.12e-07!2;CL:0002425!1.12e-07!2 | |ontology_enrichment_celltype=CL:0002127!4.53e-14!1;CL:0000914!4.53e-14!1;CL:0000911!4.53e-14!1;CL:0000814!4.53e-14!1;CL:0002042!4.53e-14!1;CL:0002039!4.53e-14!1;CL:0002040!4.53e-14!1;CL:0002041!4.53e-14!1;CL:0000945!4.40e-13!24;CL:0000826!4.40e-13!24;CL:0000838!2.72e-11!52;CL:0000542!4.55e-11!53;CL:0000051!4.55e-11!53;CL:0002032!2.39e-09!165;CL:0000837!2.39e-09!165;CL:0000037!6.62e-09!172;CL:0000566!6.62e-09!172;CL:0000988!2.49e-08!182;CL:0000893!1.12e-07!2;CL:0002489!1.12e-07!2;CL:0000809!1.12e-07!2;CL:0000808!1.12e-07!2;CL:0000894!1.12e-07!2;CL:0000806!1.12e-07!2;CL:0000807!1.12e-07!2;CL:0000805!1.12e-07!2;CL:0002425!1.12e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.73e-29;1!CL:0000911;2.73e-29;1!CL:0000814;2.73e-29;1!CL:0000945;1.97e-11;24!CL:0000542;5.72e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.78e-29,1;CL:0000914,1.78e-29,1;CL:0000911,1.78e-29,1;CL:0000814,1.78e-29,1;CL:0002042,1.78e-29,1;CL:0002039,1.78e-29,1;CL:0002040,1.78e-29,1;CL:0002041,1.78e-29,1;CL:0000893,1.78e-15,2;CL:0002489,1.78e-15,2;CL:0000809,1.78e-15,2;CL:0000808,1.78e-15,2;CL:0000894,1.78e-15,2;CL:0000806,1.78e-15,2;CL:0000807,1.78e-15,2;CL:0000805,1.78e-15,2;CL:0002425,1.78e-15,2;CL:0000838,5.53e-14,52;CL:0000542,9.98e-14,53;CL:0000051,9.98e-14,53;CL:0000945,1.97e-11,24;CL:0000826,1.97e-11,24;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002425;2.21e-15;2!CL:0000051;5.72e-07;53 | |||
|ontology_enrichment_disease=DOID:1240!4.48e-15!39;DOID:2531!2.14e-11!51;DOID:0060083!2.14e-11!51 | |ontology_enrichment_disease=DOID:1240!4.48e-15!39;DOID:2531!2.14e-11!51;DOID:0060083!2.14e-11!51 | ||
|ontology_enrichment_disease_v019=DOID:1240;3.68e-10;39!DOID:2531;1.25e-09;51!DOID:0060083;1.25e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.84e-12,39;DOID:2531,2.54e-09,51;DOID:0060083,2.54e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002171!7.55e-14!1;UBERON:0006518!7.55e-14!1;UBERON:0008949!7.55e-14!1;UBERON:0000101!7.55e-14!1;UBERON:0002167!7.55e-14!1;UBERON:0002372!1.83e-13!1;UBERON:0001961!1.83e-13!1;UBERON:0001744!1.83e-13!1;UBERON:0001735!1.83e-13!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.11e-08,4;UBERON:0005058,2.11e-08,4;UBERON:0009113,2.11e-08,4;UBERON:0003295,2.11e-08,4;UBERON:0005562,2.11e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.49513948857586,5.91124244039609,6.29686250509434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90544744788996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,1.88015874927628,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.49513948857586,5.91124244039609,6.29686250509434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90544744788996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,1.88015874927628,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr22:37259144..37259156,+ | |short_description=p@chr22:37259144..37259156,+ | ||
}} | }} |
Latest revision as of 20:50, 28 July 2015
Short description: | p@chr22:37259144..37259156, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:37259144..37259156, + |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.78e-29 | 1 |
immature NK T cell | 1.78e-29 | 1 |
effector T cell | 1.78e-29 | 1 |
mature NK T cell | 1.78e-29 | 1 |
immature NK T cell stage IV | 1.78e-29 | 1 |
immature NK T cell stage I | 1.78e-29 | 1 |
immature NK T cell stage II | 1.78e-29 | 1 |
immature NK T cell stage III | 1.78e-29 | 1 |
thymocyte | 1.78e-15 | 2 |
double negative thymocyte | 1.78e-15 | 2 |
double-positive, alpha-beta thymocyte | 1.78e-15 | 2 |
DN4 thymocyte | 1.78e-15 | 2 |
DN1 thymic pro-T cell | 1.78e-15 | 2 |
DN2 thymocyte | 1.78e-15 | 2 |
DN3 thymocyte | 1.78e-15 | 2 |
immature single positive thymocyte | 1.78e-15 | 2 |
early T lineage precursor | 1.78e-15 | 2 |
lymphoid lineage restricted progenitor cell | 5.53e-14 | 52 |
lymphocyte | 9.98e-14 | 53 |
common lymphoid progenitor | 9.98e-14 | 53 |
lymphocyte of B lineage | 1.97e-11 | 24 |
pro-B cell | 1.97e-11 | 24 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.11e-08 | 4 |
hemolymphoid system gland | 2.11e-08 | 4 |
thymic region | 2.11e-08 | 4 |
pharyngeal gland | 2.11e-08 | 4 |
thymus primordium | 2.11e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.84e-12 | 39 |
hematologic cancer | 2.54e-09 | 51 |
immune system cancer | 2.54e-09 | 51 |