FFCP PHASE1:Hg19::chr7:26400493..26400525,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29887 | |EntrezGene=29887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=14974 | |HGNC=14974 | ||
|TSSclassifier=strong | |||
|UniProt=B4DJM0,Q9Y5X0 | |UniProt=B4DJM0,Q9Y5X0 | ||
|association_with_transcript=0bp_to_NM_001199837_5end | |association_with_transcript=0bp_to_NM_001199837_5end | ||
|cluster_id=chr7:26400493..26400525,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_SNX10_5end | |description=CAGE_peak_3_at_SNX10_5end | ||
|id=chr7:26400493..26400525,+ | |id=chr7:26400493..26400525,+ | ||
|ontology_enrichment_celltype=CL:0002009!1.50e-71!65;CL:0002194!2.96e-69!63;CL:0000576!2.96e-69!63;CL:0000040!2.96e-69!63;CL:0000559!2.96e-69!63;CL:0000766!3.29e-66!76;CL:0000557!6.94e-64!71;CL:0002057!7.37e-64!42;CL:0000839!1.80e-60!70;CL:0000860!1.48e-58!45;CL:0000738!7.42e-45!140;CL:0002087!5.35e-43!119;CL:0000763!7.12e-43!112;CL:0000049!7.12e-43!112;CL:0002031!7.79e-39!124;CL:0000037!2.00e-34!172;CL:0000566!2.00e-34!172;CL:0000988!2.96e-31!182;CL:0002032!7.93e-31!165;CL:0000837!7.93e-31!165;CL:0002393!4.22e-14!9;CL:0002397!4.22e-14!9;CL:0000134!4.08e-11!358;CL:0002320!1.77e-10!365;CL:0000840!7.78e-09!5;CL:0001029!7.78e-09!5;CL:0000219!2.79e-08!390;CL:0000048!7.00e-07!430;CL:0000034!8.21e-07!444 | |ontology_enrichment_celltype=CL:0002009!1.50e-71!65;CL:0002194!2.96e-69!63;CL:0000576!2.96e-69!63;CL:0000040!2.96e-69!63;CL:0000559!2.96e-69!63;CL:0000766!3.29e-66!76;CL:0000557!6.94e-64!71;CL:0002057!7.37e-64!42;CL:0000839!1.80e-60!70;CL:0000860!1.48e-58!45;CL:0000738!7.42e-45!140;CL:0002087!5.35e-43!119;CL:0000763!7.12e-43!112;CL:0000049!7.12e-43!112;CL:0002031!7.79e-39!124;CL:0000037!2.00e-34!172;CL:0000566!2.00e-34!172;CL:0000988!2.96e-31!182;CL:0002032!7.93e-31!165;CL:0000837!7.93e-31!165;CL:0002393!4.22e-14!9;CL:0002397!4.22e-14!9;CL:0000134!4.08e-11!358;CL:0002320!1.77e-10!365;CL:0000840!7.78e-09!5;CL:0001029!7.78e-09!5;CL:0000219!2.79e-08!390;CL:0000048!7.00e-07!430;CL:0000034!8.21e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000473;7.22e-61;39!CL:0000234;7.22e-61;39!CL:0000860;1.35e-59;33!CL:0002057;1.35e-59;33!CL:0000576;9.34e-55;48!CL:0000766;1.22e-39;69!CL:0000763;3.66e-18;100!CL:0000235;1.73e-15;6!CL:0002087;5.72e-15;104!CL:0002393;7.58e-15;6!CL:0002397;7.58e-15;6!CL:0000738;1.46e-13;136!CL:0002619;1.20e-08;3!CL:0000767;3.23e-08;3!CL:0000875;8.15e-08;3!CL:0002396;8.15e-08;3!CL:0002541;2.94e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.05e-105,59;CL:0000576,1.05e-105,59;CL:0000040,1.05e-105,59;CL:0000559,1.05e-105,59;CL:0002009,8.13e-102,61;CL:0000473,2.08e-100,48;CL:0000234,2.08e-100,48;CL:0000766,7.76e-99,72;CL:0000839,4.09e-93,66;CL:0000557,1.58e-91,67;CL:0000860,9.95e-86,42;CL:0002057,9.95e-86,42;CL:0000763,4.30e-61,108;CL:0000049,4.30e-61,108;CL:0002087,5.19e-56,115;CL:0000738,3.66e-55,136;CL:0002031,6.81e-49,120;CL:0000037,1.14e-41,168;CL:0002032,3.53e-39,161;CL:0000837,3.53e-39,161;CL:0000988,9.40e-39,177;CL:0002393,5.59e-21,9;CL:0002397,5.59e-21,9;CL:0000134,6.72e-16,354;CL:0000235,1.77e-15,6;CL:0002320,2.83e-15,361;CL:0000219,4.41e-13,386;CL:0000034,1.87e-11,441;CL:0000048,4.51e-11,427;CL:0000723,1.08e-10,433;CL:0002619,1.20e-08,3;CL:0000767,3.27e-08,3;CL:0000875,8.06e-08,3;CL:0002396,8.06e-08,3;CL:0002541,3.22e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.57e-62;42!CL:0000049;1.84e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.25e-56!80;UBERON:0002390!1.18e-55!102;UBERON:0003061!1.18e-55!102;UBERON:0002193!5.58e-52!112;UBERON:0001474!2.55e-51!86;UBERON:0002405!5.38e-47!115;UBERON:0004765!7.90e-41!101;UBERON:0001434!7.90e-41!101;UBERON:0002204!1.11e-21!167;UBERON:0003081!1.45e-21!216;UBERON:0002384!3.70e-10!375;UBERON:0000926!1.86e-08!448;UBERON:0004120!1.86e-08!448;UBERON:0006603!1.86e-08!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.94e-07;3!UBERON:0000920;2.94e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.18e-79,76;UBERON:0001474,2.54e-72,82;UBERON:0002390,2.50e-68,98;UBERON:0003061,2.50e-68,98;UBERON:0002405,2.64e-67,93;UBERON:0004765,1.14e-64,90;UBERON:0002193,1.19e-60,108;UBERON:0001434,8.14e-57,100;UBERON:0002204,7.91e-30,167;UBERON:0003081,9.03e-28,203;UBERON:0002384,3.19e-15,371;UBERON:0000926,2.37e-13,315;UBERON:0004120,2.37e-13,315;UBERON:0006603,2.37e-13,315;UBERON:0000920,3.22e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1358035148426,0,0,0,0,0,0,0,0,0,0,0,0,11.4075640286182,28.4033754591937,18.7327509212452,0,0,0,0,0,0.880801318004542,85.3152929139091,50.938289657416,36.674837150979,44.5591793737449,44.3734322446002,52.5454157973741,5.52513307362346,3.40088349319928,4.12392904019288,77.6312983264987,76.4772271720596,132.554326743104,109.898493867061,88.1192830460106,218.273098187164,209.260628207127,220.755761785669,224.807967746607,16.188841200664,13.0994952027766,65.1698104890745,126.106563656812,108.47401115172,109.326648511636,12.5343494070952,13.563528718271,11.5080682643827,437.345322613276,336.459438241846,374.938993895336,27.6373531782418,38.5897359630949,75.1473402679703,320.256336893052,568.988947600787,910.145826279984,6.97142444829408,16.1579267973433,6.70907665626803,0.786300418025466,0.901061357049038,0.64290234678832,7.12531859353121,8.75233379675996,10.4118567645841,0,0,0,0,0,0,0.661044872784862,0.954053754535364,0,0,0.382273228125229,1.32171328579026,14.5732226375199,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263504357079378,2.5540919722054,0,0,5.51730569212962,5.74628133087582,16.4867871043393,2.62339686735876,3.43196946468077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.6712019313718,336.264129005085,73.1265318460543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0273292897667,14.5654556515317,40.058448501776,0,0,0,0,0,0,0,2.1673383622212,0.215627574859517,1.54011643535698,0,0,0,0.502548796003046,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,4.74571241800957,5.33637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.3463219434655,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87249745670488,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1925714846181,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46601623624687,1.19076871422421,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,2.14834370736859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,1.33969702408637,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,2.05173127149315,1.32506888912221,0,0,0,0,19.3285216747527,0,12.8414107157631,0.992332043623902,0,0,0,1.08803560673895,0.5013797880454,1.53172788381731,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,1.06442844195167,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,6.10895466869048,1.22469987149797,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0.258355639344024,0.372448285775147,0,0.636471582781649,0,0,0,0.0673520530145875,0.645499848534087,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1358035148426,0,0,0,0,0,0,0,0,0,0,0,0,11.4075640286182,28.4033754591937,18.7327509212452,0,0,0,0,0,0.880801318004542,85.3152929139091,50.938289657416,36.674837150979,44.5591793737449,44.3734322446002,52.5454157973741,5.52513307362346,3.40088349319928,4.12392904019288,77.6312983264987,76.4772271720596,132.554326743104,109.898493867061,88.1192830460106,218.273098187164,209.260628207127,220.755761785669,224.807967746607,16.188841200664,13.0994952027766,65.1698104890745,126.106563656812,108.47401115172,109.326648511636,12.5343494070952,13.563528718271,11.5080682643827,437.345322613276,336.459438241846,374.938993895336,27.6373531782418,38.5897359630949,75.1473402679703,320.256336893052,568.988947600787,910.145826279984,6.97142444829408,16.1579267973433,6.70907665626803,0.786300418025466,0.901061357049038,0.64290234678832,7.12531859353121,8.75233379675996,10.4118567645841,0,0,0,0,0,0,0.661044872784862,0.954053754535364,0,0,0.382273228125229,1.32171328579026,14.5732226375199,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263504357079378,2.5540919722054,0,0,5.51730569212962,5.74628133087582,16.4867871043393,2.62339686735876,3.43196946468077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.6712019313718,336.264129005085,73.1265318460543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0273292897667,14.5654556515317,40.058448501776,0,0,0,0,0,0,0,2.1673383622212,0.215627574859517,1.54011643535698,0,0,0,0.502548796003046,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,4.74571241800957,5.33637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.3463219434655,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87249745670488,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1925714846181,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46601623624687,1.19076871422421,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,2.14834370736859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,1.33969702408637,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,2.05173127149315,1.32506888912221,0,0,0,0,19.3285216747527,0,12.8414107157631,0.992332043623902,0,0,0,1.08803560673895,0.5013797880454,1.53172788381731,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,1.06442844195167,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,6.10895466869048,1.22469987149797,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0.258355639344024,0.372448285775147,0,0.636471582781649,0,0,0,0.0673520530145875,0.645499848534087,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0.402547587182052,0 | ||
|short_description=p3@SNX10 | |short_description=p3@SNX10 | ||
}} | }} |
Latest revision as of 23:34, 17 September 2015
Short description: | p3@SNX10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SNX10_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_NM_001199837_5end |
EntrezGene: | SNX10 |
HGNC: | 14974 |
UniProt: | B4DJM0Q9Y5X0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.18e-79 | 76 |
bone element | 2.54e-72 | 82 |
hematopoietic system | 2.50e-68 | 98 |
blood island | 2.50e-68 | 98 |
immune system | 2.64e-67 | 93 |
skeletal element | 1.14e-64 | 90 |
hemolymphoid system | 1.19e-60 | 108 |
skeletal system | 8.14e-57 | 100 |
musculoskeletal system | 7.91e-30 | 167 |
lateral plate mesoderm | 9.03e-28 | 203 |
connective tissue | 3.19e-15 | 371 |
mesoderm | 2.37e-13 | 315 |
mesoderm-derived structure | 2.37e-13 | 315 |
presumptive mesoderm | 2.37e-13 | 315 |
egg chorion | 3.22e-07 | 3 |