FFCP PHASE1:Hg19::chr7:75544466..75544482,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5447 | |EntrezGene=5447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9208 | |HGNC=9208 | ||
|TSSclassifier=strong | |||
|UniProt=P16435,C9JQ78,E7EWU0 | |UniProt=P16435,C9JQ78,E7EWU0 | ||
|association_with_transcript=0bp_to_ENST00000394893,ENST00000421059,ENST00000448410,ENST00000471238_5end | |association_with_transcript=0bp_to_ENST00000394893,ENST00000421059,ENST00000448410,ENST00000471238_5end | ||
|cluster_id=chr7:75544466..75544482,+ | |||
|description=CAGE_peak_1_at_POR_5end | |description=CAGE_peak_1_at_POR_5end | ||
|id=chr7:75544466..75544482,+ | |id=chr7:75544466..75544482,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.17e-21!42;CL:0000860!3.29e-20!45;CL:0000766!7.87e-18!76;CL:0000557!7.73e-14!71;CL:0002194!8.24e-14!63;CL:0000576!8.24e-14!63;CL:0000040!8.24e-14!63;CL:0000559!8.24e-14!63;CL:0002009!1.83e-13!65;CL:0000839!4.62e-13!70;CL:0000738!1.09e-11!140;CL:0002087!5.66e-10!119;CL:0002031!6.24e-09!124;CL:0000763!1.70e-08!112;CL:0000049!1.70e-08!112;CL:0000063!3.33e-07!578;CL:0000037!4.71e-07!172;CL:0000566!4.71e-07!172;CL:0000988!4.80e-07!182;CL:0002032!5.51e-07!165;CL:0000837!5.51e-07!165 | |ontology_enrichment_celltype=CL:0002057!7.17e-21!42;CL:0000860!3.29e-20!45;CL:0000766!7.87e-18!76;CL:0000557!7.73e-14!71;CL:0002194!8.24e-14!63;CL:0000576!8.24e-14!63;CL:0000040!8.24e-14!63;CL:0000559!8.24e-14!63;CL:0002009!1.83e-13!65;CL:0000839!4.62e-13!70;CL:0000738!1.09e-11!140;CL:0002087!5.66e-10!119;CL:0002031!6.24e-09!124;CL:0000763!1.70e-08!112;CL:0000049!1.70e-08!112;CL:0000063!3.33e-07!578;CL:0000037!4.71e-07!172;CL:0000566!4.71e-07!172;CL:0000988!4.80e-07!182;CL:0002032!5.51e-07!165;CL:0000837!5.51e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.62e-18;33!CL:0002057;1.62e-18;33!CL:0000473;7.47e-15;39!CL:0000234;7.47e-15;39!CL:0000576;8.09e-12;48!CL:0000766;1.60e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.17e-21,42;CL:0002057,7.17e-21,42;CL:0000473,1.69e-20,48;CL:0000234,1.69e-20,48;CL:0000766,7.64e-19,72;CL:0002194,9.26e-15,59;CL:0000576,9.26e-15,59;CL:0000040,9.26e-15,59;CL:0000559,9.26e-15,59;CL:0000557,1.11e-14,67;CL:0002009,2.32e-14,61;CL:0000839,7.18e-14,66;CL:0000738,4.72e-12,136;CL:0002087,2.43e-10,115;CL:0002031,3.01e-09,120;CL:0000763,7.77e-09,108;CL:0000049,7.77e-09,108;CL:0000037,3.04e-07,168;CL:0000988,3.46e-07,177;CL:0002032,3.51e-07,161;CL:0000837,3.51e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!6.37e-13!115;UBERON:0002371!4.18e-11!80;UBERON:0002390!2.67e-10!102;UBERON:0003061!2.67e-10!102;UBERON:0001474!3.87e-09!86;UBERON:0002193!3.01e-08!112;UBERON:0004765!1.99e-07!101;UBERON:0001434!1.99e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.04e-11,76;UBERON:0002390,9.66e-11,98;UBERON:0003061,9.66e-11,98;UBERON:0002405,7.05e-10,93;UBERON:0001474,1.34e-09,82;UBERON:0002193,1.43e-08,108;UBERON:0004765,1.55e-08,90;UBERON:0001434,4.10e-07,100 | |||
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| ||
|short_description=p1@POR | |short_description=p1@POR | ||
}} | }} |
Latest revision as of 12:47, 19 September 2015
Short description: | p1@POR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000394893, ENST00000421059, ENST00000448410, ENST00000471238_5end |
EntrezGene: | POR |
HGNC: | 9208 |
UniProt: | P16435C9JQ78E7EWU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.17e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.17e-21 | 42 |
defensive cell | 1.69e-20 | 48 |
phagocyte | 1.69e-20 | 48 |
myeloid leukocyte | 7.64e-19 | 72 |
monopoietic cell | 9.26e-15 | 59 |
monocyte | 9.26e-15 | 59 |
monoblast | 9.26e-15 | 59 |
promonocyte | 9.26e-15 | 59 |
granulocyte monocyte progenitor cell | 1.11e-14 | 67 |
macrophage dendritic cell progenitor | 2.32e-14 | 61 |
myeloid lineage restricted progenitor cell | 7.18e-14 | 66 |
leukocyte | 4.72e-12 | 136 |
nongranular leukocyte | 2.43e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.01e-09 | 120 |
myeloid cell | 7.77e-09 | 108 |
common myeloid progenitor | 7.77e-09 | 108 |
hematopoietic stem cell | 3.04e-07 | 168 |
hematopoietic cell | 3.46e-07 | 177 |
hematopoietic oligopotent progenitor cell | 3.51e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.51e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.04e-11 | 76 |
hematopoietic system | 9.66e-11 | 98 |
blood island | 9.66e-11 | 98 |
immune system | 7.05e-10 | 93 |
bone element | 1.34e-09 | 82 |
hemolymphoid system | 1.43e-08 | 108 |
skeletal element | 1.55e-08 | 90 |
skeletal system | 4.10e-07 | 100 |