FFCP PHASE1:Hg19::chr14:105155925..105155979,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:105155925..105155979,+
|short_description=p1@INF2
|description=CAGE_peak_1_at_INF2_5end
|association_with_transcript=0bp_to_ENST00000330634,ENST0000039263...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64423 | |EntrezGene=64423 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23791 | |HGNC=23791 | ||
|TSSclassifier=strong | |||
|UniProt=Q27J81 | |UniProt=Q27J81 | ||
|association_with_transcript=0bp_to_ENST00000330634,ENST00000392634,ENST00000398337,NM_001031714,NM_022489,NM_032714,uc001yoy.3,uc001ypb.2,uc001ypc.2_5end | |||
|cluster_id=chr14:105155925..105155979,+ | |||
|description=CAGE_peak_1_at_INF2_5end | |||
|id=chr14:105155925..105155979,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.85e-12!254;CL:0000222!1.28e-10!119;CL:0000220!3.03e-09!246;CL:0002321!5.32e-09!248;CL:0002078!8.69e-09!44;CL:0000213!5.40e-08!57;CL:0000215!5.40e-08!57;CL:1000449!1.14e-07!16;CL:0000115!1.39e-07!35;CL:0000055!3.69e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:1000449;3.64e-08;15!CL:0002681;6.73e-07;12!CL:0002584;6.73e-07;12!CL:1000497;8.49e-07;17!CL:0002518;8.49e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.01e-12,253;CL:0000222,8.87e-11,121;CL:0002321,3.67e-09,250;CL:0002078,4.31e-09,45;CL:0000213,2.83e-08,58;CL:0000215,2.83e-08,58;CL:1000449,3.76e-08,15;CL:0000115,6.86e-08,36;CL:0002681,6.93e-07,12;CL:0002584,6.93e-07,12;CL:1000497,8.75e-07,17;CL:0002518,8.75e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!7.99e-18!312;UBERON:0000025!1.42e-17!194;UBERON:0000483!4.61e-17!309;UBERON:0000477!8.83e-17!286;UBERON:0004111!3.15e-16!241;UBERON:0000475!1.06e-14!365;UBERON:0000064!3.27e-12!219;UBERON:0003914!2.53e-11!118;UBERON:0002049!1.02e-10!79;UBERON:0007798!1.02e-10!79;UBERON:0000481!1.17e-10!347;UBERON:0000055!3.93e-10!69;UBERON:0001981!2.24e-09!60;UBERON:0007500!2.24e-09!60;UBERON:0004537!2.24e-09!60;UBERON:0006965!2.24e-09!60;UBERON:0000467!2.67e-08!625;UBERON:0001637!4.54e-08!42;UBERON:0003509!4.54e-08!42;UBERON:0004572!4.54e-08!42;UBERON:0000480!5.06e-08!626;UBERON:0003075!5.13e-08!86;UBERON:0007284!5.13e-08!86;UBERON:0000468!5.57e-08!659;UBERON:0002100!7.69e-08!216;UBERON:0001049!7.84e-08!57;UBERON:0005068!7.84e-08!57;UBERON:0006241!7.84e-08!57;UBERON:0007135!7.84e-08!57;UBERON:0004872!1.14e-07!84;UBERON:0004211!1.14e-07!16;UBERON:0001285!1.14e-07!16;UBERON:0007684!1.14e-07!16;UBERON:0003220!1.14e-07!16;UBERON:0004208!1.14e-07!16;UBERON:0001893!2.08e-07!34;UBERON:0002020!2.76e-07!34;UBERON:0003528!2.76e-07!34;UBERON:0005256!3.18e-07!143;UBERON:0002791!5.36e-07!33;UBERON:0006555!7.77e-07!17;UBERON:0005103!7.77e-07!17;UBERON:0000083!7.77e-07!17;UBERON:0009201!7.77e-07!17;UBERON:0004819!7.77e-07!17;UBERON:0006553!7.77e-07!17;UBERON:0003074!7.77e-07!17;UBERON:0003060!7.77e-07!17;UBERON:0002616!8.75e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.64e-08;15!UBERON:0004819;3.64e-08;15!UBERON:0001285;3.64e-08;15!UBERON:0007684;3.64e-08;15!UBERON:0003914;1.84e-07;74!UBERON:0001225;6.73e-07;12!UBERON:0008987;6.73e-07;12!UBERON:0000353;7.71e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,9.05e-18,309;UBERON:0000025,1.98e-17,192;UBERON:0000483,5.22e-17,306;UBERON:0004111,7.91e-16,240;UBERON:0003914,1.96e-11,117;UBERON:0002049,7.38e-11,78;UBERON:0007798,7.38e-11,78;UBERON:0000055,2.78e-10,68;UBERON:0010371,9.84e-10,104;UBERON:0007500,1.55e-09,59;UBERON:0001981,1.55e-09,59;UBERON:0004537,1.55e-09,59;UBERON:0006965,1.55e-09,59;UBERON:0010314,3.56e-08,132;UBERON:0004211,3.76e-08,15;UBERON:0009773,3.76e-08,15;UBERON:0001231,3.76e-08,15;UBERON:0001285,3.76e-08,15;UBERON:0007684,3.76e-08,15;UBERON:0004208,3.76e-08,15;UBERON:0001637,4.54e-08,42;UBERON:0003509,4.54e-08,42;UBERON:0004572,4.54e-08,42;UBERON:0003075,7.33e-08,82;UBERON:0007284,7.33e-08,82;UBERON:0004872,9.16e-08,83;UBERON:0001049,1.31e-07,56;UBERON:0005068,1.31e-07,56;UBERON:0006241,1.31e-07,56;UBERON:0007135,1.31e-07,56;UBERON:0001893,2.08e-07,34;UBERON:0003528,2.76e-07,34;UBERON:0002020,2.76e-07,34;UBERON:0006555,3.09e-07,16;UBERON:0004819,3.09e-07,16;UBERON:0001225,6.93e-07,12;UBERON:0008987,6.93e-07,12;UBERON:0000353,7.72e-07,15;UBERON:0003056,9.58e-07,61 | |||
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|short_description=p1@INF2 | |||
}} | }} |
Latest revision as of 17:15, 18 September 2015
Short description: | p1@INF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_INF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000330634, ENST00000392634, ENST00000398337, NM_001031714, NM_022489, NM_032714, uc001yoy.3, uc001ypb.2, uc001ypc.2_5end |
EntrezGene: | INF2 |
HGNC: | 23791 |
UniProt: | Q27J81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.01e-12 | 253 |
mesodermal cell | 8.87e-11 | 121 |
embryonic cell | 3.67e-09 | 250 |
meso-epithelial cell | 4.31e-09 | 45 |
lining cell | 2.83e-08 | 58 |
barrier cell | 2.83e-08 | 58 |
epithelial cell of nephron | 3.76e-08 | 15 |
endothelial cell | 6.86e-08 | 36 |
kidney cortical cell | 6.93e-07 | 12 |
renal cortical epithelial cell | 6.93e-07 | 12 |
kidney cell | 8.75e-07 | 17 |
kidney epithelial cell | 8.75e-07 | 17 |