FFCP PHASE1:Hg19::chr14:23019340..23019356,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:23019340..23019356,+
|short_description=p@chr14:23019340..23019356,+
|description=CAGE_peak_at_chr14:23019340..23019356,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:23019340..23019356,+ | |||
|description=CAGE_peak_at_chr14:23019340..23019356,+ | |||
|id=chr14:23019340..23019356,+ | |||
|ontology_enrichment_celltype=CL:0000084!1.09e-22!25;CL:0000827!1.09e-22!25;CL:0000838!6.50e-21!52;CL:0000542!2.46e-20!53;CL:0000051!2.46e-20!53;CL:0000791!7.93e-19!18;CL:0000789!7.93e-19!18;CL:0002420!7.93e-19!18;CL:0002419!7.93e-19!18;CL:0000790!7.93e-19!18;CL:0000624!2.26e-10!6;CL:0000625!1.66e-09!11;CL:0002087!1.01e-07!119;CL:0000115!1.85e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.48e-20;18!CL:0000789;3.48e-20;18!CL:0002419;3.48e-20;18!CL:0000084;1.02e-18;25!CL:0000625;1.69e-17;11!CL:0000623;4.19e-11;3!CL:0000542;1.89e-10;53!CL:0000039;2.37e-10;7!CL:0000586;2.37e-10;7!CL:0000895;5.97e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.10e-20,18;CL:0000789,4.10e-20,18;CL:0002420,4.10e-20,18;CL:0002419,4.10e-20,18;CL:0000790,4.10e-20,18;CL:0000084,1.21e-18,25;CL:0000827,1.21e-18,25;CL:0000625,3.22e-17,11;CL:0000838,4.55e-16,52;CL:0000542,9.92e-16,53;CL:0000051,9.92e-16,53;CL:0000623,3.99e-11,3;CL:0000825,3.99e-11,3;CL:0000039,1.53e-10,7;CL:0000586,1.53e-10,7;CL:0000810,3.31e-09,1;CL:0000895,3.31e-09,1;CL:0002436,3.31e-09,1;CL:0002427,3.31e-09,1;CL:0002428,3.31e-09,1;CL:0002429,3.31e-09,1;CL:0002433,3.31e-09,1;CL:0002431,3.31e-09,1;CL:0002432,3.31e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000790;3.48e-20;18!CL:0000051;1.89e-10;53!CL:0002427;5.97e-09;1!UBERON:0009117;2.17e-07;10!UBERON:0005564;2.17e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;1.67e-09;1!DOID:3347;2.30e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.60e-09,1;DOID:3347,2.40e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.03e-09;8!UBERON:0003135;9.27e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.76e-09,8;UBERON:0003135,7.07e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.152826811495903,0.492603536699674,0.393553906568396,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0.651032612147555,0,0,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7703879310245,0.786021525498329,0.616804496998528,0.334372990781356,0.32592226663359,0.473447805734733,1.94826728407911,1.00269411196656,0.589211814949674,0.664601683750863,0.541607727530031,0,0.390178042679635,0.328875809207352,0.276350017785848,1.15921234294021,0.444859689486181,0,0,0.793165398882963,1.91610246800961,0,0.759059076058509,0,0.651083453856419,0,1.05402583354441,0.639933055772092,2.49861453104692,0.473554504088034,0,2.01606743224732,1.06976078313403,1.15859523106239,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,3.06633274931766,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897048674762886,0,0.5867062865676,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,1.57624608161542,1.50939302401662,0.77005821767849,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979005787313703,0,0,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,1.04980416073495,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0.411362273086194,0,1.62009431171434,0,0,0,0,0,0.721346064882224,0.497992903438899,0.159426272728822,0,0,0.423347165447766,0,0,2.9670508274315,0.156679895773023,2.50634477090067,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,2.04386596391473,0.941881538370149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8102999429603,0,0,0.321506296930038,0.825236619583403,0.415440338029185,0,0,0,0,0.0788057072991982,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999843263696853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0.314531883711793,0,0.169732529954025,0,0.247871528518004,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0710797781803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504665699340316,0.764859003745869,0,1.83579893535567,1.60330443159336,1.74600309116205,0.250707539292375,0,0.267964130156178,0,0,0.213233981900981,0.476128862927481,0.387533459016037,0.124149428591716,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 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| ||
|short_description=p@chr14:23019340..23019356,+ | |||
}} | }} |
Latest revision as of 19:15, 24 July 2015
Short description: | p@chr14:23019340..23019356, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:23019340..23019356, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.10e-20 | 18 |
alpha-beta T cell | 4.10e-20 | 18 |
immature T cell | 4.10e-20 | 18 |
mature T cell | 4.10e-20 | 18 |
immature alpha-beta T cell | 4.10e-20 | 18 |
T cell | 1.21e-18 | 25 |
pro-T cell | 1.21e-18 | 25 |
CD8-positive, alpha-beta T cell | 3.22e-17 | 11 |
lymphoid lineage restricted progenitor cell | 4.55e-16 | 52 |
lymphocyte | 9.92e-16 | 53 |
common lymphoid progenitor | 9.92e-16 | 53 |
natural killer cell | 3.99e-11 | 3 |
pro-NK cell | 3.99e-11 | 3 |
germ line cell | 1.53e-10 | 7 |
germ cell | 1.53e-10 | 7 |
CD4-positive, alpha-beta thymocyte | 3.31e-09 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.31e-09 | 1 |
mature CD4 single-positive thymocyte | 3.31e-09 | 1 |
resting double-positive thymocyte | 3.31e-09 | 1 |
double-positive blast | 3.31e-09 | 1 |
CD69-positive double-positive thymocyte | 3.31e-09 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 3.31e-09 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.31e-09 | 1 |
CD24-positive, CD4 single-positive thymocyte | 3.31e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 2.76e-09 | 8 |
male reproductive organ | 7.07e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.60e-09 | 1 |
osteosarcoma | 2.40e-09 | 1 |