FFCP PHASE1:Hg19::chr8:41121516..41121538,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:41121516..41121538,- | |||
|coexpression_cluster_id=C863 | |||
|description=CAGE_peak_at_chr8:41121516..41121538,- | |description=CAGE_peak_at_chr8:41121516..41121538,- | ||
|id=chr8:41121516..41121538,- | |id=chr8:41121516..41121538,- | ||
|ontology_enrichment_celltype=CL:0000055!2.31e-08!180;CL:0000325!1.19e-07!39;CL:0000057!5.03e-07!75 | |ontology_enrichment_celltype=CL:0000055!2.31e-08!180;CL:0000325!1.19e-07!39;CL:0000057!5.03e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000064;5.97e-11;3!CL:0000067;5.97e-11;3!CL:0005012;5.97e-11;3!CL:0002304;5.97e-11;3!CL:0002615;7.87e-10;3!CL:0002536;3.45e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,5.46e-11,3;CL:0000067,5.46e-11,3;CL:0005012,5.46e-11,3;CL:0002304,5.46e-11,3;CL:0002615,1.07e-09,3;CL:0002536,1.94e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005795;4.13e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;3.60e-11;3!DOID:127;3.60e-11;3!DOID:0060072;1.86e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.57e-11,3;DOID:127,3.57e-11,3;DOID:0060072,1.85e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.25e-10!365;UBERON:0005156!3.53e-10!59;UBERON:0000990!3.53e-10!59;UBERON:0000468!2.93e-09!659;UBERON:0007625!4.84e-08!11;UBERON:0003133!2.45e-07!48;UBERON:0004121!2.79e-07!169;UBERON:0001456!4.64e-07!21;UBERON:0000924!5.30e-07!173;UBERON:0006601!5.30e-07!173;UBERON:0005631!6.01e-07!14;UBERON:0000158!6.01e-07!14;UBERON:0000064!8.53e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;6.42e-14;4!UBERON:0003688;1.26e-12;6!UBERON:0002358;1.26e-12;6!UBERON:0003684;1.26e-12;6!UBERON:0001178;1.26e-12;6!UBERON:0001778;5.97e-11;3!UBERON:0001775;5.97e-11;3!UBERON:0001456;8.44e-11;21!UBERON:0001801;1.80e-10;14!UBERON:0007625;2.61e-10;11!UBERON:0002203;2.91e-09;6!UBERON:0001768;2.91e-09;6!UBERON:0002200;2.91e-09;6!UBERON:0004457;2.66e-08;9!UBERON:0000042;2.66e-08;9!UBERON:0005406;1.00e-07;2!UBERON:0000019;2.02e-07;19!UBERON:0000047;2.02e-07;19!UBERON:0004088;2.02e-07;19!UBERON:0010230;2.02e-07;19!UBERON:0004089;2.82e-07;2!UBERON:0001829;3.45e-07;2!UBERON:0000970;5.38e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,5.26e-14,4;UBERON:0003688,1.23e-12,6;UBERON:0002358,1.23e-12,6;UBERON:0003684,1.23e-12,6;UBERON:0001178,1.23e-12,6;UBERON:0001778,5.46e-11,3;UBERON:0001775,5.46e-11,3;UBERON:0001801,2.54e-10,14;UBERON:0007625,3.00e-10,11;UBERON:0001456,4.82e-10,22;UBERON:0002203,2.56e-09,6;UBERON:0001768,2.56e-09,6;UBERON:0002200,2.56e-09,6;UBERON:0005406,1.02e-07,2;UBERON:0004089,4.24e-07,2;UBERON:0001829,5.58e-07,2;UBERON:0004923,5.70e-07,66;UBERON:0000019,6.75e-07,20;UBERON:0000047,6.75e-07,20;UBERON:0010312,6.75e-07,20;UBERON:0004088,6.75e-07,20;UBERON:0010230,6.75e-07,20;UBERON:0003072,6.75e-07,20;UBERON:0004128,6.75e-07,20;UBERON:0003071,6.75e-07,20 | |||
|phase1_expression=0.908391896352783,1.71280419112787,1.12763523276777,4.00293193412522,1.34088328328186,3.48935409640147,0,0,0,0.982935746006035,0,1.96597234917155,3.69273769519835,0.247532705920093,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0.246242116153576,0.816002764977012,1.56727360739044,0.286235987131057,1.64249310087461,0.251085279189606,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63220604103932,6.20842312895179,4.65524364173568,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0.12663051166458,0.132409180813219,2.0078563452417,1.41867352879343,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0.597794722207204,0,0,0.140450806702248,0.61246251376468,1.10550885580591,0.413303124703062,1.18800285728205,0.494533858557114,0,0,0.336672227908132,0.250237039743928,0,0.438977620880838,0,0.300476117813194,0,0,0,2.33125091275518,0.900273288253207,0.206105058476878,0,0.18611685633159,0.337552664482532,0.584622030967192,0.252433774244115,0.276149695926898,0.323292113637624,0.710019185033229,0,0.169560592310488,0,0,0,0.609868530647977,1.98794652482228,0.580969714347592,0.207322110030741,0.252320850875628,1.82488679537915,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,3.94605963686609,0.329250856225877,0,0.201057944823262,0,0,1.03993478527958,10.1031939417691,1.04337364477569,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,1.45316969256981,0,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0,0,0,0,0.2933531432838,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,0,0,0.502548796003046,0.637938751653163,0,0,0,0.12269149171914,1.00034104211935,0.271265023699736,0,0.356857977594324,0,0.117141414992713,0,0,1.03473071292505,0,0,1.30325421702124,0,0,0,0,0,0.303127571446259,3.32870879020994,0.30239029332968,0.496215615637554,0.153461973288062,1.12264037773229,1.92208723883551,2.04682899626681,0.965123526861645,4.45254199334973,0,0,0.0821271560138091,2.07701771673448,0,0,0.200506470303285,0.920809889358963,0.229628896329213,2.36718518408732,0.917870904715969,0,0.15403067420883,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0.512900250232778,0.656029291399411,0.976135183992909,0.103041011647722,0,0,0,0.650060246036521,1.6068392984416,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,3.71876439437829,10.3888074454111,3.485186350803,0,0,1.73986598415015,0.74129687641568,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0.636406495851874,0,0,0.274537029736055,0.589062011728432,0,0,0.421258456238981,0,0.731140468893853,0,0.682499557039929,0.989838023675989,0,1.65409603063837,2.65375590096488,0.438450885253763,0.578775534266688,1.31178950409327,0,0,0,0.143411352204052,0,0,0.709522128141196,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0.307160702099232,0,0,0,0,0,0.398495976502139,0,0.251932747854276,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0,0.885741385813839,0.120596438625408,0,0,0.886642856860642,0,0,0,0.846452843541768,0,0.23056390438806,0.718061155278177,0.217294743844016,2.87101043758728,0.549585560411174,13.3258694004659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.741383633679017,0.104421949505455,0.067401132980677,0.802577647298789,0,0,0,0,1.18375320854817,0,0.30607276163049,0.189559738885464,0,0.103688191397247,0,0.661983911750998,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.387956065953678,0,0.451961481561065,0.274083849293502,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,1.95497680890578,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.470284307407084,0.360299883542404,0,0,0,0,0,0,0,0,1.44677833618517,1.2378549293751,2.9080823662043,0,0,0,0,0.709251365692784,0.367182116944987,0,0,0.383830394638891,2.85878130549347,0,0,14.1179896455965,5.18532894720761,13.3900817644858,0,0,0.511164065356265,1.01980882368113,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0.7520696820681,0.919036730290385,0,0,0,0.366078794705889,0.1251909307065,1.14681839138014,0.221858103073705,0.0620964029413835,0,0,0.303298235083296,0.570930667089935,0,0,0,0,0.233713309847224,0,0.568209015825267,0.251567901752575,0,0,0,1.08806040407946,0.295710299979268,0.159296767163702,0.449803112163605,0.465788870628778,0.414706207840855,0.797525143673985,0.521745061811734,0,0,0.406870733204662,0.727394636810238,0,0.928067519756987,0,0,0.34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| 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| ||
|short_description=p@chr8:41121516..41121538,- | |short_description=p@chr8:41121516..41121538,- | ||
}} | }} |
Latest revision as of 18:22, 31 July 2015
Short description: | p@chr8:41121516..41121538, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:41121516..41121538, - |
Coexpression cluster: | C863_leiomyoma_Smooth_Ciliary_Lens_chorionic_Amniotic_Iris |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 5.46e-11 | 3 |
ciliated epithelial cell | 5.46e-11 | 3 |
multi-ciliated epithelial cell | 5.46e-11 | 3 |
non-pigmented ciliary epithelial cell | 5.46e-11 | 3 |
adipocyte of omentum tissue | 1.07e-09 | 3 |
amniotic epithelial cell | 1.94e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 5.26e-14 | 4 |
omentum | 1.23e-12 | 6 |
peritoneum | 1.23e-12 | 6 |
abdominal cavity | 1.23e-12 | 6 |
visceral peritoneum | 1.23e-12 | 6 |
ciliary epithelium | 5.46e-11 | 3 |
ciliary body | 5.46e-11 | 3 |
anterior segment of eyeball | 2.54e-10 | 14 |
pigment epithelium of eye | 3.00e-10 | 11 |
face | 4.82e-10 | 22 |
vasculature of eye | 2.56e-09 | 6 |
uvea | 2.56e-09 | 6 |
vasculature of head | 2.56e-09 | 6 |
perirenal fat | 1.02e-07 | 2 |
midface | 4.24e-07 | 2 |
major salivary gland | 5.58e-07 | 2 |
organ component layer | 5.70e-07 | 66 |
camera-type eye | 6.75e-07 | 20 |
simple eye | 6.75e-07 | 20 |
immature eye | 6.75e-07 | 20 |
ocular region | 6.75e-07 | 20 |
eyeball of camera-type eye | 6.75e-07 | 20 |
optic cup | 6.75e-07 | 20 |
optic vesicle | 6.75e-07 | 20 |
eye primordium | 6.75e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.57e-11 | 3 |
leiomyoma | 3.57e-11 | 3 |
benign neoplasm | 1.85e-08 | 4 |