FFCP PHASE1:Hg19::chr8:41122345..41122365,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:41122345..41122365,- | |||
|coexpression_cluster_id=C863 | |||
|description=CAGE_peak_at_chr8:41122345..41122365,- | |description=CAGE_peak_at_chr8:41122345..41122365,- | ||
|id=chr8:41122345..41122365,- | |id=chr8:41122345..41122365,- | ||
|ontology_enrichment_celltype=CL:0000055!4.86e-07!180;CL:0000540!9.31e-07!6;CL:0000031!9.31e-07!6;CL:0000404!9.31e-07!6 | |ontology_enrichment_celltype=CL:0000055!4.86e-07!180;CL:0000540!9.31e-07!6;CL:0000031!9.31e-07!6;CL:0000404!9.31e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.82e-16;3!CL:0000067;1.82e-16;3!CL:0005012;1.82e-16;3!CL:0002304;1.82e-16;3!CL:0002539;4.26e-08;10!CL:0002541;6.78e-08;3!CL:0000540;1.11e-07;6!CL:0000404;1.11e-07;6!CL:0002622;1.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.97e-16,3;CL:0000067,1.97e-16,3;CL:0005012,1.97e-16,3;CL:0002304,1.97e-16,3;CL:0002539,3.74e-08,10;CL:0002541,6.03e-08,3;CL:0000540,1.19e-07,6;CL:0000031,1.19e-07,6;CL:0000404,1.19e-07,6;CL:0002622,1.49e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.16e-08;10!CL:0000031;1.11e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;3.81e-16;3!DOID:127;3.81e-16;3!DOID:0060072;3.12e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.82e-16,3;DOID:127,2.82e-16,3;DOID:0060072,2.49e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0004121!5.54e-09!169;UBERON:0000924!7.29e-09!173;UBERON:0006601!7.29e-09!173;UBERON:0000468!2.86e-08!659;UBERON:0000475!3.88e-08!365;UBERON:0007625!2.26e-07!11;UBERON:0001444!4.73e-07!48;UBERON:0000020!5.53e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;3.67e-21;4!UBERON:0001778;1.82e-16;3!UBERON:0001775;1.82e-16;3!UBERON:0002203;3.77e-14;6!UBERON:0001768;3.77e-14;6!UBERON:0002200;3.77e-14;6!UBERON:0007625;1.01e-11;11!UBERON:0005406;8.01e-11;2!UBERON:0001801;3.84e-09;14!UBERON:0001456;2.93e-08;21!UBERON:0004237;4.26e-08;10!UBERON:0004695;4.26e-08;10!UBERON:0002111;4.26e-08;10!UBERON:0004178;4.26e-08;10!UBERON:0003124;6.78e-08;3!UBERON:0000920;6.78e-08;3!UBERON:0000947;7.93e-08;21!UBERON:0010191;7.93e-08;21!UBERON:0006876;9.68e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,3.69e-21,4;UBERON:0001778,1.97e-16,3;UBERON:0001775,1.97e-16,3;UBERON:0002203,3.78e-14,6;UBERON:0001768,3.78e-14,6;UBERON:0002200,3.78e-14,6;UBERON:0007625,1.00e-11,11;UBERON:0005406,4.52e-11,2;UBERON:0001801,3.81e-09,14;UBERON:0004237,3.74e-08,10;UBERON:0004695,3.74e-08,10;UBERON:0002111,3.74e-08,10;UBERON:0004178,3.74e-08,10;UBERON:0000920,6.03e-08,3;UBERON:0001456,6.69e-08,22;UBERON:0000947,7.65e-08,21;UBERON:0010191,7.65e-08,21;UBERON:0006876,9.69e-08,11;UBERON:0001444,7.77e-07,49 | |||
|phase1_expression=0.363356758541113,1.49870366723688,0.422863212287913,2.00146596706261,0,1.74467704820074,0,0,0,0.245733936501509,0,0.655324116390517,1.31883489114227,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0,1.02000345622126,0.313454721478088,0,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0.486634870302636,4.15953195521899,4.65631734671384,5.53359149866694,0.392937226493138,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0.12663051166458,0,0.860509862246441,1.41867352879343,0.560677600142307,0,0,0,0,0,0.302714855289863,0,0,0.624320153660641,0,0,0,0,0,0.204154171254893,1.84251475967652,0.619954687054593,0,0.741800787835671,0,0,1.17835279767846,0.625592599359821,0,0,0,0.45071417671979,0.113432183160021,0,0,0.423863802319124,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0.292311015483596,0,0.276149695926898,0,0,0.10075209822764,0.169560592310488,0,0,0,0.365921118388786,1.06023814657188,0.813357600086629,0.414644220061482,1.00928340350251,0.72995471815166,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74508496477641,0,0,0.301586917234893,0.0925884451585296,0.325808305310325,0,5.77325368101093,0.579652024875384,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,1.53353071666084,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.234282829985426,0,0,0,0,0,1.21637060255316,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0.64341568457443,2.96836132889982,0,0,0.0821271560138091,3.63478100428535,0,0,0.200506470303285,0.368323955743585,0.459257792658427,2.73136752010076,1.57349297951309,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.512900250232778,0.328014645699706,0,0,0,0,0,0.650060246036521,4.82051789532479,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0.10115778085555,1.39453664789186,1.88887408098384,2.0911118104818,0,0,4.34966496037536,0.37064843820784,0,0,0,0,0.511795582622668,0,0.636406495851874,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0.731140468893853,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0.66343897524122,0.876901770507525,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0.140669416410513,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.442317039724898,0.295547618953547,0,0,0,0.538651809526579,0,0,0.538545866458633,0,2.87101043758728,0.274792780205587,6.92945208824225,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0.789168805698781,0,0.30607276163049,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.677942222341597,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.687481272035051,0.717873024576814,0,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,0,0.136203406111576,1.12527203925513,1.37539436597234,1.66176135211674,0,0,0,0,0.472834243795189,0.209818352539992,0,0,0,2.1440859791201,0,0,15.203988849104,1.72844298240254,12.0837323240481,0,0,0,0.79318464064088,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0.610131324509816,0.1251909307065,0,0.443716206147409,0,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0.251567901752575,0,0.228840068396924,0.302461847526478,0.310874401165561,0,0,0,0.155262956876259,0,0.53168342911599,0,0,0.380805212168795,0,0.363697318405119,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.425149840203366,0,0,0,0,0,1.76337971845342,0,0.0642292250964595,0,0.159633859057151,0,0.504143392443436,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,1.31017534008077,0,0.135075169236789,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0.203909198930495,0,0.118193840883968,0,0,0.157115589916002,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0.971421986118279,0,0,0.118920090777569,0.11294608203896,0.329821550236287,0,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0,0,0,0,0.730336388246517,2.75237570042724,0.430018749454354,0,0,0,0,0,0.4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| ||
|short_description=p@chr8:41122345..41122365,- | |short_description=p@chr8:41122345..41122365,- | ||
}} | }} |
Latest revision as of 18:23, 31 July 2015
Short description: | p@chr8:41122345..41122365, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:41122345..41122365, - |
Coexpression cluster: | C863_leiomyoma_Smooth_Ciliary_Lens_chorionic_Amniotic_Iris |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.97e-16 | 3 |
ciliated epithelial cell | 1.97e-16 | 3 |
multi-ciliated epithelial cell | 1.97e-16 | 3 |
non-pigmented ciliary epithelial cell | 1.97e-16 | 3 |
aortic smooth muscle cell | 3.74e-08 | 10 |
chorionic membrane mesenchymal stem cell | 6.03e-08 | 3 |
neuron | 1.19e-07 | 6 |
neuroblast | 1.19e-07 | 6 |
electrically signaling cell | 1.19e-07 | 6 |
prostate stromal cell | 1.49e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 3.69e-21 | 4 |
ciliary epithelium | 1.97e-16 | 3 |
ciliary body | 1.97e-16 | 3 |
vasculature of eye | 3.78e-14 | 6 |
uvea | 3.78e-14 | 6 |
vasculature of head | 3.78e-14 | 6 |
pigment epithelium of eye | 1.00e-11 | 11 |
perirenal fat | 4.52e-11 | 2 |
anterior segment of eyeball | 3.81e-09 | 14 |
blood vessel smooth muscle | 3.74e-08 | 10 |
arterial system smooth muscle | 3.74e-08 | 10 |
artery smooth muscle tissue | 3.74e-08 | 10 |
aorta smooth muscle tissue | 3.74e-08 | 10 |
egg chorion | 6.03e-08 | 3 |
face | 6.69e-08 | 22 |
aorta | 7.65e-08 | 21 |
aortic system | 7.65e-08 | 21 |
vasculature of organ | 9.69e-08 | 11 |
subdivision of head | 7.77e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.82e-16 | 3 |
leiomyoma | 2.82e-16 | 3 |
benign neoplasm | 2.49e-12 | 4 |