FFCP PHASE1:Hg19::chr2:21230531..21230544,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=28bp_to_X03045_5end | |association_with_transcript=28bp_to_X03045_5end | ||
|cluster_id=chr2:21230531..21230544,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_31_at_APOB_5end | |description=CAGE_peak_31_at_APOB_5end | ||
|id=chr2:21230531..21230544,- | |id=chr2:21230531..21230544,- | ||
|ontology_enrichment_celltype=CL:0000181!5.07e-40!12;CL:0000417!5.07e-40!12;CL:0000668!5.07e-40!12;CL:0000414!5.07e-40!12;CL:0000412!5.07e-40!12;CL:0000182!5.07e-40!12;CL:0002563!6.99e-14!4;CL:0000223!1.02e-13!59;CL:0002253!8.60e-08!2 | |ontology_enrichment_celltype=CL:0000181!5.07e-40!12;CL:0000417!5.07e-40!12;CL:0000668!5.07e-40!12;CL:0000414!5.07e-40!12;CL:0000412!5.07e-40!12;CL:0000182!5.07e-40!12;CL:0002563!6.99e-14!4;CL:0000223!1.02e-13!59;CL:0002253!8.60e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.37e-59;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.50e-59,12;CL:0000223,2.52e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.70e-45;11!UBERON:0009497;6.42e-38;13!UBERON:0001041;1.36e-16;30!UBERON:0003104;5.02e-16;31!CL:0000223;3.15e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.32e-44!19;UBERON:0006925!2.32e-44!19;UBERON:0008836!2.32e-44!19;UBERON:0008835!3.08e-38!22;UBERON:0003894!3.08e-38!22;UBERON:0009854!1.50e-36!23;UBERON:0007499!1.40e-33!25;UBERON:0009497!1.40e-33!25;UBERON:0000015!1.40e-33!25;UBERON:0002423!1.40e-33!25;UBERON:0006235!1.40e-33!25;UBERON:0004161!1.40e-33!25;UBERON:0005057!2.88e-32!26;UBERON:0009856!2.88e-32!26;UBERON:0002365!5.78e-27!31;UBERON:0002330!5.78e-27!31;UBERON:0002368!8.25e-24!35;UBERON:0003929!1.49e-23!54;UBERON:0000949!2.28e-18!45;UBERON:0004921!8.03e-16!129;UBERON:0004185!8.03e-16!129;UBERON:0005911!3.78e-15!82;UBERON:0005172!6.73e-15!55;UBERON:0005173!6.73e-15!55;UBERON:0001242!6.99e-14!4;UBERON:0001262!6.99e-14!4;UBERON:0004786!6.99e-14!4;UBERON:0004808!6.99e-14!4;UBERON:0001277!6.99e-14!4;UBERON:0002530!7.73e-14!59;UBERON:0002417!2.33e-13!61;UBERON:0000916!2.33e-13!61;UBERON:0001007!6.15e-13!155;UBERON:0001555!6.15e-13!155;UBERON:0007026!6.15e-13!155;UBERON:0004119!9.54e-12!169;UBERON:0000925!9.54e-12!169;UBERON:0006595!9.54e-12!169;UBERON:0000160!1.21e-11!27;UBERON:0003350!2.68e-11!5;UBERON:0005409!4.78e-09!35;UBERON:0000490!1.57e-08!138;UBERON:0001041!5.15e-08!98;UBERON:0000077!2.26e-07!130;UBERON:0005177!2.86e-07!107;UBERON:0009569!7.72e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.96e-66;19!UBERON:0006925;3.96e-66;19!UBERON:0002423;2.93e-50;25!UBERON:0002365;5.64e-39;31!UBERON:0002330;5.64e-39;31!UBERON:0002368;2.33e-34;33!UBERON:0000949;4.05e-25;43!UBERON:0005172;5.77e-15;52!UBERON:0005173;5.77e-15;52!UBERON:0002417;4.11e-13;58!UBERON:0000916;4.11e-13;58!UBERON:0002530;5.39e-13;57!UBERON:0001007;4.94e-11;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.79e-66,19;UBERON:0006925,3.79e-66,19;UBERON:0008836,3.79e-66,19;UBERON:0008835,3.95e-57,22;UBERON:0003894,3.95e-57,22;UBERON:0009854,1.20e-54,23;UBERON:0007499,2.84e-50,25;UBERON:0009497,2.84e-50,25;UBERON:0000015,2.84e-50,25;UBERON:0002423,2.84e-50,25;UBERON:0006235,2.84e-50,25;UBERON:0004161,2.84e-50,25;UBERON:0009856,2.45e-48,26;UBERON:0002365,1.56e-40,31;UBERON:0002330,1.56e-40,31;UBERON:0002368,6.86e-36,35;UBERON:0000949,6.95e-28,45;UBERON:0003929,3.31e-23,54;UBERON:0005172,3.31e-23,54;UBERON:0005173,3.31e-23,54;UBERON:0002530,3.20e-21,59;UBERON:0002417,7.29e-21,60;UBERON:0000916,7.29e-21,60;UBERON:0005911,3.41e-15,82;UBERON:0001041,2.66e-14,87;UBERON:0004921,4.04e-13,118;UBERON:0005177,2.85e-12,101;UBERON:0009569,4.97e-11,112;UBERON:0001007,1.31e-10,145;UBERON:0001555,1.31e-10,145;UBERON:0007026,1.31e-10,145;UBERON:0003914,1.53e-10,117;UBERON:0005256,4.30e-10,122;UBERON:0004119,1.42e-09,160;UBERON:0000925,1.42e-09,160;UBERON:0006595,1.42e-09,160;UBERON:0000490,3.05e-08,148;UBERON:0001048,1.37e-07,160;UBERON:0003104,1.37e-07,160;UBERON:0009142,1.37e-07,160 | |||
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|short_description=p31@APOB | |short_description=p31@APOB | ||
}} | }} |
Latest revision as of 23:08, 19 September 2015
Short description: | p31@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 28bp_to_X03045_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.50e-59 | 12 |
endodermal cell | 2.52e-12 | 58 |