FFCP PHASE1:Hg19::chr14:29236510..29236521,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:29236510..29236521,+
|short_description=p9@FOXG1
|description=CAGE_peak_9_at_FOXG1_5end
|association_with_transcript=66bp_to_BC035020_5end
|EntrezGene=22...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2290 | |EntrezGene=2290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3811 | |HGNC=3811 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=66bp_to_BC035020_5end | |||
|cluster_id=chr14:29236510..29236521,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_9_at_FOXG1_5end | |||
|id=chr14:29236510..29236521,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.39e-10!25;CL:0000128!1.03e-09!7;CL:0000126!1.03e-09!7;CL:0000127!1.03e-09!7;CL:0002453!1.03e-09!7;CL:0002605!2.20e-09!3;CL:0000064!1.74e-08!3;CL:0005012!1.74e-08!3;CL:0000067!1.74e-08!3;CL:0002304!1.74e-08!3;CL:0000133!1.03e-07!59;CL:0000243!4.47e-07!15;CL:0000125!4.47e-07!15;CL:0000030!4.47e-07!15;CL:0000339!4.47e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000540;7.72e-22;6!CL:0000404;7.72e-22;6!CL:0002319;1.31e-18;25!CL:0000047;1.61e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.21e-28,8;CL:0000540,7.72e-22,6;CL:0000031,7.72e-22,6;CL:0000404,7.72e-22,6;CL:0002319,1.27e-18,25;CL:0000133,4.25e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000031;7.72e-22;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000956;8.95e-14;25!UBERON:0000203;8.95e-14;25!UBERON:0002021;1.74e-12;5!UBERON:0001950;2.75e-11;20!UBERON:0002791;8.02e-11;32!UBERON:0001869;9.99e-11;32!UBERON:0002780;2.31e-10;41!UBERON:0001890;2.31e-10;41!UBERON:0002619;2.50e-10;22!UBERON:0001893;2.09e-08;34!UBERON:0000007;2.77e-08;2!UBERON:0003528;3.32e-08;34!UBERON:0002020;3.32e-08;34!UBERON:0001017;1.70e-07;75!UBERON:0001016;2.53e-07;83!UBERON:0000073;7.70e-07;53!UBERON:0002616;7.70e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.35e-19,81;UBERON:0001016,1.43e-17,89;UBERON:0000956,8.48e-14,25;UBERON:0000203,8.48e-14,25;UBERON:0002021,1.69e-12,5;UBERON:0002780,5.60e-12,41;UBERON:0001890,5.60e-12,41;UBERON:0003080,5.60e-12,41;UBERON:0006240,5.60e-12,41;UBERON:0001950,2.71e-11,20;UBERON:0002791,7.17e-11,32;UBERON:0001869,7.17e-11,32;UBERON:0002619,2.47e-10,22;UBERON:0003528,3.01e-10,34;UBERON:0002020,3.01e-10,34;UBERON:0001893,3.01e-10,34;UBERON:0000955,1.75e-09,68;UBERON:0006238,1.75e-09,68;UBERON:0011216,2.81e-09,223;UBERON:0000073,2.97e-09,53;UBERON:0002616,2.97e-09,53;UBERON:0001049,9.47e-09,56;UBERON:0005068,9.47e-09,56;UBERON:0006241,9.47e-09,56;UBERON:0007135,9.47e-09,56;UBERON:0004121,9.97e-09,171;UBERON:0000924,9.97e-09,171;UBERON:0006601,9.97e-09,171;UBERON:0000007,2.67e-08,2;UBERON:0003056,5.10e-08,61 | |||
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| ||
|short_description=p9@FOXG1 | |||
}} | }} |
Latest revision as of 16:28, 19 September 2015
Short description: | p9@FOXG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FOXG1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 66bp_to_BC035020_5end |
EntrezGene: | FOXG1 |
HGNC: | 3811 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.21e-28 | 8 |
neuron | 7.72e-22 | 6 |
neuroblast | 7.72e-22 | 6 |
electrically signaling cell | 7.72e-22 | 6 |
neural cell | 1.27e-18 | 25 |
neurectodermal cell | 4.25e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.35e-19 | 81 |
nervous system | 1.43e-17 | 89 |
cerebral cortex | 8.48e-14 | 25 |
pallium | 8.48e-14 | 25 |
occipital lobe | 1.69e-12 | 5 |
regional part of forebrain | 5.60e-12 | 41 |
forebrain | 5.60e-12 | 41 |
anterior neural tube | 5.60e-12 | 41 |
future forebrain | 5.60e-12 | 41 |
neocortex | 2.71e-11 | 20 |
regional part of telencephalon | 7.17e-11 | 32 |
cerebral hemisphere | 7.17e-11 | 32 |
regional part of cerebral cortex | 2.47e-10 | 22 |
brain grey matter | 3.01e-10 | 34 |
gray matter | 3.01e-10 | 34 |
telencephalon | 3.01e-10 | 34 |
brain | 1.75e-09 | 68 |
future brain | 1.75e-09 | 68 |
organ system subdivision | 2.81e-09 | 223 |
regional part of nervous system | 2.97e-09 | 53 |
regional part of brain | 2.97e-09 | 53 |
neural tube | 9.47e-09 | 56 |
neural rod | 9.47e-09 | 56 |
future spinal cord | 9.47e-09 | 56 |
neural keel | 9.47e-09 | 56 |
ectoderm-derived structure | 9.97e-09 | 171 |
ectoderm | 9.97e-09 | 171 |
presumptive ectoderm | 9.97e-09 | 171 |
pituitary gland | 2.67e-08 | 2 |
pre-chordal neural plate | 5.10e-08 | 61 |