FFCP PHASE1:Hg19::chr2:21231906..21231929,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=Q13789 | |UniProt=Q13789 | ||
|association_with_transcript=-390bp_to_X03324_5end | |association_with_transcript=-390bp_to_X03324_5end | ||
|cluster_id=chr2:21231906..21231929,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_13_at_APOB_5end | |description=CAGE_peak_13_at_APOB_5end | ||
|id=chr2:21231906..21231929,- | |id=chr2:21231906..21231929,- | ||
|ontology_enrichment_celltype=CL:0000181!1.22e-39!12;CL:0000417!1.22e-39!12;CL:0000668!1.22e-39!12;CL:0000414!1.22e-39!12;CL:0000412!1.22e-39!12;CL:0000182!1.22e-39!12;CL:0000223!3.55e-11!59;CL:0000946!1.78e-08!1;CL:0000786!1.78e-08!1;CL:0000980!1.78e-08!1 | |ontology_enrichment_celltype=CL:0000181!1.22e-39!12;CL:0000417!1.22e-39!12;CL:0000668!1.22e-39!12;CL:0000414!1.22e-39!12;CL:0000412!1.22e-39!12;CL:0000182!1.22e-39!12;CL:0000223!3.55e-11!59;CL:0000946!1.78e-08!1;CL:0000786!1.78e-08!1;CL:0000980!1.78e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.01e-50;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.05e-50,12;CL:0000223,4.75e-13,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.34e-40;11!UBERON:0009497;2.45e-34;13!UBERON:0001041;9.43e-15;30!UBERON:0003104;2.54e-14;31!CL:0000223;4.12e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;1.44e-52;19!UBERON:0006925;1.44e-52;19!UBERON:0002423;9.20e-40;25!UBERON:0002365;6.27e-31;31!UBERON:0002330;6.27e-31;31!UBERON:0002368;3.89e-27;33!UBERON:0002108;1.03e-22;4!UBERON:0000949;2.01e-19;43!UBERON:0000160;6.38e-17;17!UBERON:0001007;1.54e-14;81!UBERON:0005409;3.02e-13;22!UBERON:0005172;7.06e-12;52!UBERON:0005173;7.06e-12;52!UBERON:0002417;4.93e-11;58!UBERON:0000916;4.93e-11;58!UBERON:0002530;1.05e-09;57!UBERON:0004921;7.36e-08;33 | |||
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|short_description=p13@APOB | |short_description=p13@APOB | ||
}} | }} |
Latest revision as of 23:19, 19 September 2015
Short description: | p13@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -390bp_to_X03324_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | Q13789 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.05e-50 | 12 |
endodermal cell | 4.75e-13 | 58 |