FFCP PHASE1:Hg19::chr2:29353207..29353220,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:29353207..29353220,- | |||
|coexpression_cluster_id=C619 | |||
|description=CAGE_peak_at_chr2:29353207..29353220,- | |description=CAGE_peak_at_chr2:29353207..29353220,- | ||
|id=chr2:29353207..29353220,- | |id=chr2:29353207..29353220,- | ||
|ontology_enrichment_celltype=CL:0000860!4.56e-18!45;CL:0002057!1.44e-17!42;CL:0002194!1.94e-10!63;CL:0000576!1.94e-10!63;CL:0000040!1.94e-10!63;CL:0000559!1.94e-10!63;CL:0002009!7.86e-10!65;CL:0000839!3.62e-09!70;CL:0000557!6.57e-09!71;CL:0000766!9.92e-08!76 | |ontology_enrichment_celltype=CL:0000860!4.56e-18!45;CL:0002057!1.44e-17!42;CL:0002194!1.94e-10!63;CL:0000576!1.94e-10!63;CL:0000040!1.94e-10!63;CL:0000559!1.94e-10!63;CL:0002009!7.86e-10!65;CL:0000839!3.62e-09!70;CL:0000557!6.57e-09!71;CL:0000766!9.92e-08!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.37e-43;33!CL:0002057;3.37e-43;33!CL:0000473;4.66e-28;39!CL:0000234;4.66e-28;39!CL:0000576;2.55e-20;48!CL:0000159;3.46e-10;2!CL:0000766;3.65e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.24e-36,42;CL:0002057,1.24e-36,42;CL:0000473,1.91e-31,48;CL:0000234,1.91e-31,48;CL:0002194,3.48e-24,59;CL:0000576,3.48e-24,59;CL:0000040,3.48e-24,59;CL:0000559,3.48e-24,59;CL:0002009,3.00e-23,61;CL:0000839,3.73e-21,66;CL:0000557,8.99e-21,67;CL:0000766,5.06e-19,72;CL:0000763,3.39e-11,108;CL:0000049,3.39e-11,108;CL:0002087,3.02e-10,115;CL:0000159,3.97e-10,2;CL:0002031,1.23e-09,120;CL:0000738,5.36e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;3.47e-25;42!UBERON:0001041;2.90e-08;30 | |||
|ontology_enrichment_disease=DOID:305!3.23e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.11e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0005153!7.95e-10!37;UBERON:0000162!1.14e-07!14;UBERON:0001353!1.14e-07!14;UBERON:0000163!1.14e-07!14;UBERON:0006866!1.14e-07!14;UBERON:0000164!1.14e-07!14;UBERON:0000931!1.14e-07!14;UBERON:0005157!1.27e-07!51;UBERON:0002371!1.33e-07!80;UBERON:0005911!1.42e-07!82;UBERON:0002367!1.92e-07!11;UBERON:0010147!1.92e-07!11;UBERON:0009846!1.92e-07!11;UBERON:0003353!1.92e-07!11;UBERON:0004902!1.92e-07!11;UBERON:0003820!1.92e-07!11;UBERON:0009847!1.92e-07!11;UBERON:0004122!5.70e-07!15 | |ontology_enrichment_uberon=UBERON:0005153!7.95e-10!37;UBERON:0000162!1.14e-07!14;UBERON:0001353!1.14e-07!14;UBERON:0000163!1.14e-07!14;UBERON:0006866!1.14e-07!14;UBERON:0000164!1.14e-07!14;UBERON:0000931!1.14e-07!14;UBERON:0005157!1.27e-07!51;UBERON:0002371!1.33e-07!80;UBERON:0005911!1.42e-07!82;UBERON:0002367!1.92e-07!11;UBERON:0010147!1.92e-07!11;UBERON:0009846!1.92e-07!11;UBERON:0003353!1.92e-07!11;UBERON:0004902!1.92e-07!11;UBERON:0003820!1.92e-07!11;UBERON:0009847!1.92e-07!11;UBERON:0004122!5.70e-07!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.71e-18,76;UBERON:0001474,3.70e-16,82;UBERON:0004765,5.23e-16,90;UBERON:0001434,6.19e-14,100;UBERON:0002405,1.02e-13,93;UBERON:0002390,8.62e-13,98;UBERON:0003061,8.62e-13,98;UBERON:0002193,3.39e-11,108 | |||
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| ||
|short_description=p@chr2:29353207..29353220,- | |short_description=p@chr2:29353207..29353220,- | ||
}} | }} |
Latest revision as of 09:27, 29 July 2015
Short description: | p@chr2:29353207..29353220, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:29353207..29353220, - |
Coexpression cluster: | C619_squamous_bile_Small_Mammary_mucinous_Tracheal_giant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.24e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-36 | 42 |
defensive cell | 1.91e-31 | 48 |
phagocyte | 1.91e-31 | 48 |
monopoietic cell | 3.48e-24 | 59 |
monocyte | 3.48e-24 | 59 |
monoblast | 3.48e-24 | 59 |
promonocyte | 3.48e-24 | 59 |
macrophage dendritic cell progenitor | 3.00e-23 | 61 |
myeloid lineage restricted progenitor cell | 3.73e-21 | 66 |
granulocyte monocyte progenitor cell | 8.99e-21 | 67 |
myeloid leukocyte | 5.06e-19 | 72 |
myeloid cell | 3.39e-11 | 108 |
common myeloid progenitor | 3.39e-11 | 108 |
nongranular leukocyte | 3.02e-10 | 115 |
seromucus secreting cell | 3.97e-10 | 2 |
hematopoietic lineage restricted progenitor cell | 1.23e-09 | 120 |
leukocyte | 5.36e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.71e-18 | 76 |
bone element | 3.70e-16 | 82 |
skeletal element | 5.23e-16 | 90 |
skeletal system | 6.19e-14 | 100 |
immune system | 1.02e-13 | 93 |
hematopoietic system | 8.62e-13 | 98 |
blood island | 8.62e-13 | 98 |
hemolymphoid system | 3.39e-11 | 108 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.11e-08 | 106 |