FFCP PHASE1:Hg19::chr9:135996537..135996544,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5900 | |EntrezGene=5900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9842 | |HGNC=9842 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000493438_5end | |association_with_transcript=0bp_to_ENST00000493438_5end | ||
|cluster_id=chr9:135996537..135996544,- | |||
|coexpression_cluster_id=C3606 | |||
|description=CAGE_peak_9_at_RALGDS_5end | |description=CAGE_peak_9_at_RALGDS_5end | ||
|id=chr9:135996537..135996544,- | |id=chr9:135996537..135996544,- | ||
|ontology_enrichment_celltype=CL:0000766!1.01e-23!76;CL:0000557!9.82e-22!71;CL:0000860!4.11e-21!45;CL:0002009!5.47e-21!65;CL:0002057!6.30e-21!42;CL:0000839!9.67e-20!70;CL:0002194!1.32e-19!63;CL:0000576!1.32e-19!63;CL:0000040!1.32e-19!63;CL:0000559!1.32e-19!63;CL:0000763!2.93e-17!112;CL:0000049!2.93e-17!112;CL:0000738!5.94e-14!140;CL:0000988!4.14e-12!182;CL:0002031!4.59e-12!124;CL:0000037!1.77e-11!172;CL:0000566!1.77e-11!172;CL:0002032!2.36e-11!165;CL:0000837!2.36e-11!165;CL:0002087!7.45e-11!119 | |ontology_enrichment_celltype=CL:0000766!1.01e-23!76;CL:0000557!9.82e-22!71;CL:0000860!4.11e-21!45;CL:0002009!5.47e-21!65;CL:0002057!6.30e-21!42;CL:0000839!9.67e-20!70;CL:0002194!1.32e-19!63;CL:0000576!1.32e-19!63;CL:0000040!1.32e-19!63;CL:0000559!1.32e-19!63;CL:0000763!2.93e-17!112;CL:0000049!2.93e-17!112;CL:0000738!5.94e-14!140;CL:0000988!4.14e-12!182;CL:0002031!4.59e-12!124;CL:0000037!1.77e-11!172;CL:0000566!1.77e-11!172;CL:0002032!2.36e-11!165;CL:0000837!2.36e-11!165;CL:0002087!7.45e-11!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.35e-51;33!CL:0002057;5.35e-51;33!CL:0000473;2.05e-40;39!CL:0000234;2.05e-40;39!CL:0000576;9.33e-26;48!CL:0000766;4.37e-23;69!CL:0000094;1.88e-11;8!CL:0000081;7.79e-11;11!CL:0000763;1.26e-09;100!CL:0000767;1.78e-08;3!CL:0000840;1.45e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.52e-50,72;CL:0000860,5.53e-48,42;CL:0002057,5.53e-48,42;CL:0000473,1.59e-47,48;CL:0000234,1.59e-47,48;CL:0002009,9.34e-46,61;CL:0000557,2.48e-43,67;CL:0002194,1.00e-41,59;CL:0000576,1.00e-41,59;CL:0000040,1.00e-41,59;CL:0000559,1.00e-41,59;CL:0000839,9.61e-39,66;CL:0000763,1.98e-35,108;CL:0000049,1.98e-35,108;CL:0000738,7.87e-26,136;CL:0000988,6.36e-22,177;CL:0002031,2.61e-21,120;CL:0002032,2.92e-21,161;CL:0000837,2.92e-21,161;CL:0000037,6.78e-20,168;CL:0002087,2.13e-18,115;CL:0000094,1.41e-11,8;CL:0000081,4.57e-11,11;CL:0000767,1.09e-08,3;CL:0000840,1.05e-07,5;CL:0001029,1.05e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.90e-35;42!CL:0000049;1.01e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.25e-16!80;UBERON:0001474!6.23e-16!86;UBERON:0001049!3.39e-14!57;UBERON:0005068!3.39e-14!57;UBERON:0006241!3.39e-14!57;UBERON:0007135!3.39e-14!57;UBERON:0001017!1.59e-13!82;UBERON:0002390!3.21e-13!102;UBERON:0003061!3.21e-13!102;UBERON:0000073!4.97e-13!94;UBERON:0001016!4.97e-13!94;UBERON:0004765!6.40e-13!101;UBERON:0001434!6.40e-13!101;UBERON:0005743!1.91e-12!86;UBERON:0002193!1.20e-11!112;UBERON:0002616!3.47e-11!59;UBERON:0002346!5.21e-11!90;UBERON:0003075!8.72e-11!86;UBERON:0007284!8.72e-11!86;UBERON:0000955!1.29e-10!69;UBERON:0006238!1.29e-10!69;UBERON:0002405!1.81e-09!115;UBERON:0002780!6.27e-09!41;UBERON:0001890!6.27e-09!41;UBERON:0006240!6.27e-09!41;UBERON:0000924!7.48e-09!173;UBERON:0006601!7.48e-09!173;UBERON:0001893!1.32e-08!34;UBERON:0004121!1.39e-08!169;UBERON:0002020!1.48e-08!34;UBERON:0003528!1.48e-08!34;UBERON:0003080!1.82e-08!42;UBERON:0002791!3.64e-08!33;UBERON:0007023!7.85e-08!115;UBERON:0003076!1.05e-07!15;UBERON:0003057!1.05e-07!15;UBERON:0001869!1.27e-07!32;UBERON:0004732!5.26e-07!13;UBERON:0000033!8.50e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;6.53e-07;2!UBERON:0000122;6.53e-07;2!UBERON:0000200;7.50e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.77e-37,76;UBERON:0001474,1.28e-33,82;UBERON:0002390,3.61e-32,98;UBERON:0003061,3.61e-32,98;UBERON:0004765,9.22e-30,90;UBERON:0002405,1.74e-28,93;UBERON:0002193,3.28e-28,108;UBERON:0001434,8.30e-26,100;UBERON:0002204,1.62e-12,167;UBERON:0003081,8.24e-12,203;UBERON:0001049,1.78e-08,56;UBERON:0005068,1.78e-08,56;UBERON:0006241,1.78e-08,56;UBERON:0007135,1.78e-08,56;UBERON:0001017,6.08e-08,81;UBERON:0001016,1.20e-07,89;UBERON:0000073,6.48e-07,53;UBERON:0002616,6.48e-07,53;UBERON:0005162,7.06e-07,2;UBERON:0000122,7.06e-07,2;UBERON:0000200,8.88e-07,6 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.369363174230364,0.408001382488506,0.626909442956176,0,0.136874425072884,0,0.229240217243854,0.0821005894499457,0.157421562627358,2.36018566109342,1.53531759238885,1.54816123316076,0,0,0.369754010166788,0,0.142169232487422,0,0.553995408531877,2.00544447470142,1.51907609501096,0,0.32389366601898,0,0.436194716338694,1.51150377475524,1.4555043671269,0.929716147622738,2.46700732813095,2.78735733805593,3.45230870786581,3.07392847834921,2.83778675866302,2.41321976515633,3.22742341791913,5.41705946377367,1.50593871634084,2.18324920046277,1.12361742222542,2.75475503133812,1.92557416245656,1.27867425159808,0.659702600373432,2.19410023383795,2.98357325372886,2.61188314765726,5.10646702222026,1.24564449799115,4.52247597462138,1.0429658368404,1.95469960234605,2.42159801053347,3.68277635987565,3.48108626184973,0.845021145247767,0,0.419317291016752,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.764546456250458,2.64342657158052,1.12101712596307,0,0.196709770113833,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0.670700859703636,0,0,0,0,0,0,0.283604451492204,0,0.43917392846563,0.130979075497713,0,0,0.649094787309367,1.74129737299267,3.45690697349049,0.715471872916026,0.571994910780128,0,0,0.860234595106124,0,0,0.419499436209906,0,0.208994966536811,0,0,0.33472061276467,0.805658634218294,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,1.31780417436063,7.75560528296651,0.436094052142534,0,0,0.264818361626438,0,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0.570471821544449,0.298897361103602,0,0.161872944368132,0,0,0.368502951935304,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0.340296549480063,0,0.427114777637135,0,0.600182192168805,0.206105058476878,0.257640540045629,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0.231860809950154,0,0,0,0,0,0.858486162094873,0.246217006087397,2.80805118167085,0.743155811443641,0,0,0,0,0,0,0,0.792435906119034,1.24396869324463,0.576479813667846,0.6312121671319,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0.197030760201927,0.431255149719035,0.641715181398742,1.01637849688985,1.30139853857622,0.773288812777695,0.167516265334349,0.637938751653163,0,0,1.24324654030811,0.24538298343828,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.391602314925481,0.686286847621712,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.247528499761764,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0.372158369359667,0,0,0,0,0.636406495851874,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0.169291777801603,0,0,0,0,0,0,0,0.19538809540204,1.39203086947621,0,0,0.33307196799782,0,0.18714054040822,0,0,0,0,0.23874448473769,0.593929361665277,0,0,1.1253553312841,0,0.16480387422676,0.211125408127993,0.597743964753209,0,0,0.102268682502155,0.246169610922139,0,0,0.179021174675609,0,0.0986434056369336,0,0,2.90799823828566,1.20598527610407,0,0,0.0874599999961957,0,0,0,0,0,0,0,3.54296554325536,0.361789315876224,0,0.442317039724898,0.886642856860642,0.219385397153973,0,1.39423744278603,0.0769502585037971,0,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0.784901281975124,0.332423363800313,0.225595660617181,0,0.335643173951685,0.37950746544837,0.158936578980379,0,0,0,0.216388639742091,0,0,0,1.77912677208373,2.10058696209055,2.50612678813093,2.42644078730437,0,0.937057782901357,0,0.391329237864179,0.242780379534093,0,0,0,0.379119477770928,0.450970258243478,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0,0,0,0.391969589657511,0.0870592065804026,0.52418000472609,0,0.387025325156341,0.0730893170861856,0.164230914106418,0.678923115418936,0.264768380074501,0.225980740780532,0.274083849293502,0,0.886351143382302,0.195551382734803,0,0.426905989478705,0.39961921916426,0.288180834308212,0,0.171594997861965,0.14405479798815,0,0,0.135904206073614,0.104602846312333,0,0,0.600420288709789,1.64286454670392,0,0,0.262887354279314,0,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0,0,0,0,0.24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| ||
|short_description=p9@RALGDS | |short_description=p9@RALGDS | ||
}} | }} |
Latest revision as of 05:54, 16 September 2015
Short description: | p9@RALGDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RALGDS_5end |
Coexpression cluster: | C3606_CD14_Eosinophils_retina_Neutrophils_locus_pons_occipital |
Association with transcript: | 0bp_to_ENST00000493438_5end |
EntrezGene: | RALGDS |
HGNC: | 9842 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.52e-50 | 72 |
classical monocyte | 5.53e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.53e-48 | 42 |
defensive cell | 1.59e-47 | 48 |
phagocyte | 1.59e-47 | 48 |
macrophage dendritic cell progenitor | 9.34e-46 | 61 |
granulocyte monocyte progenitor cell | 2.48e-43 | 67 |
monopoietic cell | 1.00e-41 | 59 |
monocyte | 1.00e-41 | 59 |
monoblast | 1.00e-41 | 59 |
promonocyte | 1.00e-41 | 59 |
myeloid lineage restricted progenitor cell | 9.61e-39 | 66 |
myeloid cell | 1.98e-35 | 108 |
common myeloid progenitor | 1.98e-35 | 108 |
leukocyte | 7.87e-26 | 136 |
hematopoietic cell | 6.36e-22 | 177 |
hematopoietic lineage restricted progenitor cell | 2.61e-21 | 120 |
hematopoietic oligopotent progenitor cell | 2.92e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.92e-21 | 161 |
hematopoietic stem cell | 6.78e-20 | 168 |
nongranular leukocyte | 2.13e-18 | 115 |
granulocyte | 1.41e-11 | 8 |
blood cell | 4.57e-11 | 11 |
basophil | 1.09e-08 | 3 |
immature conventional dendritic cell | 1.05e-07 | 5 |
common dendritic progenitor | 1.05e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.77e-37 | 76 |
bone element | 1.28e-33 | 82 |
hematopoietic system | 3.61e-32 | 98 |
blood island | 3.61e-32 | 98 |
skeletal element | 9.22e-30 | 90 |
immune system | 1.74e-28 | 93 |
hemolymphoid system | 3.28e-28 | 108 |
skeletal system | 8.30e-26 | 100 |
musculoskeletal system | 1.62e-12 | 167 |
lateral plate mesoderm | 8.24e-12 | 203 |
neural tube | 1.78e-08 | 56 |
neural rod | 1.78e-08 | 56 |
future spinal cord | 1.78e-08 | 56 |
neural keel | 1.78e-08 | 56 |
central nervous system | 6.08e-08 | 81 |
nervous system | 1.20e-07 | 89 |
regional part of nervous system | 6.48e-07 | 53 |
regional part of brain | 6.48e-07 | 53 |
multi cell component structure | 7.06e-07 | 2 |
neuron projection bundle | 7.06e-07 | 2 |
gyrus | 8.88e-07 | 6 |