FFCP PHASE1:Hg19::chr9:14909994..14910006,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=158326 | |EntrezGene=158326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23399 | |HGNC=23399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=227bp_to_uc003zlm.2_5end | |association_with_transcript=227bp_to_uc003zlm.2_5end | ||
|cluster_id=chr9:14909994..14910006,- | |||
|coexpression_cluster_id=C1288 | |||
|description=CAGE_peak_6_at_FREM1_5end | |description=CAGE_peak_6_at_FREM1_5end | ||
|id=chr9:14909994..14910006,- | |id=chr9:14909994..14910006,- | ||
|ontology_enrichment_celltype=CL:0002274!2.81e-07!5;CL:0000457!2.81e-07!5;CL:0002191!2.81e-07!5;CL:0000097!2.81e-07!5;CL:0000831!2.81e-07!5;CL:0002028!2.81e-07!5 | |ontology_enrichment_celltype=CL:0002274!2.81e-07!5;CL:0000457!2.81e-07!5;CL:0002191!2.81e-07!5;CL:0000097!2.81e-07!5;CL:0000831!2.81e-07!5;CL:0002028!2.81e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.39e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.52e-08,5;CL:0002028,3.52e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.13e-19;2!UBERON:0000358;1.37e-10;1!UBERON:0005754;1.37e-10;1!UBERON:0004140;2.87e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.00e-22!115;UBERON:0006947!6.79e-08!3;UBERON:0004054!6.79e-08!3;UBERON:0003076!3.33e-07!15;UBERON:0003057!3.33e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.02e-28;3!UBERON:0004054;1.02e-28;3!UBERON:0005904;1.04e-21;4!UBERON:0002050;3.61e-17;5!UBERON:0005423;3.61e-17;5!UBERON:0000922;9.41e-13;49!UBERON:0004175;6.10e-11;21!UBERON:0001000;7.76e-11;1!UBERON:0001301;7.76e-11;1!UBERON:0005352;7.76e-11;1!UBERON:0005795;9.38e-11;1!UBERON:0006834;9.38e-11;1!UBERON:0000998;1.37e-10;1!UBERON:0006868;1.37e-10;1!UBERON:0007029;2.87e-10;1!UBERON:0002346;4.44e-10;4!UBERON:0000923;4.44e-10;4!UBERON:0010316;4.44e-10;4!UBERON:0005291;4.44e-10;4!UBERON:0000058;5.16e-09;10!UBERON:0003135;3.09e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.92e-29,3;UBERON:0004054,8.92e-29,3;UBERON:0005904,9.42e-22,4;UBERON:0001000,7.40e-11,1;UBERON:0005352,7.40e-11,1;UBERON:0001301,8.14e-11,1;UBERON:0006834,8.95e-11,1;UBERON:0000998,1.19e-10,1;UBERON:0006868,1.19e-10,1;UBERON:0007029,1.73e-10,1;UBERON:0004175,3.82e-09,25;UBERON:0003135,2.98e-08,11 | |||
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| ||
|short_description=p6@FREM1 | |short_description=p6@FREM1 | ||
}} | }} |
Latest revision as of 18:43, 16 September 2015
Short description: | p6@FREM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FREM1_5end |
Coexpression cluster: | C1288_kidney_neuroectodermal_uterus_Mast_skin_rhabdomyosarcoma_ductus |
Association with transcript: | 227bp_to_uc003zlm.2_5end |
EntrezGene: | FREM1 |
HGNC: | 23399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.52e-08 | 5 |
basophil mast progenitor cell | 3.52e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 8.92e-29 | 3 |
internal male genitalia | 8.92e-29 | 3 |
duct of male reproductive system | 9.42e-22 | 4 |
vas deferens | 7.40e-11 | 1 |
spermatic cord | 7.40e-11 | 1 |
epididymis | 8.14e-11 | 1 |
uterus or analog | 8.95e-11 | 1 |
seminal vesicle | 1.19e-10 | 1 |
seminal fluid secreting gland | 1.19e-10 | 1 |
surface | 1.73e-10 | 1 |
internal genitalia | 3.82e-09 | 25 |
male reproductive organ | 2.98e-08 | 11 |