FFCP PHASE1:Hg19::chr2:60780580..60780590,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53335 | |EntrezGene=53335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13221 | |HGNC=13221 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_ENST00000358510_5end | |association_with_transcript=-14bp_to_ENST00000358510_5end | ||
|cluster_id=chr2:60780580..60780590,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_9_at_BCL11A_5end | |description=CAGE_peak_9_at_BCL11A_5end | ||
|id=chr2:60780580..60780590,- | |id=chr2:60780580..60780590,- | ||
|ontology_enrichment_celltype=CL:0000236!8.63e-09!14;CL:0000945!1.71e-07!24;CL:0000826!1.71e-07!24 | |ontology_enrichment_celltype=CL:0000236!8.63e-09!14;CL:0000945!1.71e-07!24;CL:0000826!1.71e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.82e-13;3!CL:0000236;1.55e-10;13!CL:0000540;6.98e-07;6!CL:0000404;6.98e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.90e-13,3;CL:0000236,1.04e-09,14;CL:0000047,1.21e-08,8;CL:0000540,6.99e-07,6;CL:0000031,6.99e-07,6;CL:0000404,6.99e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;6.98e-07;6 | |||
|ontology_enrichment_disease=DOID:2531!8.99e-09!51;DOID:0060083!8.99e-09!51;DOID:1240!1.47e-08!39;DOID:8692!1.57e-07!31 | |ontology_enrichment_disease=DOID:2531!8.99e-09!51;DOID:0060083!8.99e-09!51;DOID:1240!1.47e-08!39;DOID:8692!1.57e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.12e-08;31!DOID:1240;8.93e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.18e-08,31;DOID:1240,7.26e-08,39;DOID:2531,6.32e-07,51;DOID:0060083,6.32e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001869!7.94e-19!32;UBERON:0001893!2.30e-18!34;UBERON:0002791!1.59e-17!33;UBERON:0001017!2.20e-17!82;UBERON:0002020!7.82e-17!34;UBERON:0003528!7.82e-17!34;UBERON:0000956!1.56e-16!25;UBERON:0000203!1.56e-16!25;UBERON:0001950!2.94e-16!20;UBERON:0002619!3.57e-16!22;UBERON:0002780!4.46e-16!41;UBERON:0001890!4.46e-16!41;UBERON:0006240!4.46e-16!41;UBERON:0005743!7.01e-16!86;UBERON:0000073!1.25e-15!94;UBERON:0001016!1.25e-15!94;UBERON:0003080!1.82e-15!42;UBERON:0004121!2.31e-15!169;UBERON:0000955!6.39e-15!69;UBERON:0006238!6.39e-15!69;UBERON:0000924!1.65e-14!173;UBERON:0006601!1.65e-14!173;UBERON:0000153!4.54e-14!129;UBERON:0007811!4.54e-14!129;UBERON:0003056!2.59e-13!61;UBERON:0000033!3.28e-13!123;UBERON:0002616!4.31e-13!59;UBERON:0001049!4.58e-13!57;UBERON:0005068!4.58e-13!57;UBERON:0006241!4.58e-13!57;UBERON:0007135!4.58e-13!57;UBERON:0003075!2.95e-12!86;UBERON:0007284!2.95e-12!86;UBERON:0002346!3.87e-11!90;UBERON:0007023!2.99e-09!115;UBERON:0000200!2.20e-07!6;UBERON:0001872!8.64e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.35e-26;22!UBERON:0001950;1.12e-24;20!UBERON:0000956;7.71e-23;25!UBERON:0000203;7.71e-23;25!UBERON:0001869;3.29e-16;32!UBERON:0002791;1.24e-15;32!UBERON:0003528;2.30e-14;34!UBERON:0002020;2.30e-14;34!UBERON:0001893;3.91e-14;34!UBERON:0002780;4.73e-10;41!UBERON:0001890;4.73e-10;41!UBERON:0001871;3.05e-09;6!UBERON:0002021;9.35e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.84e-26,22;UBERON:0001950,7.72e-25,20;UBERON:0000956,6.68e-23,25;UBERON:0000203,6.68e-23,25;UBERON:0002791,2.00e-17,32;UBERON:0001869,2.00e-17,32;UBERON:0003528,2.90e-16,34;UBERON:0002020,2.90e-16,34;UBERON:0001893,2.90e-16,34;UBERON:0002780,4.46e-13,41;UBERON:0001890,4.46e-13,41;UBERON:0003080,4.46e-13,41;UBERON:0006240,4.46e-13,41;UBERON:0001017,6.88e-13,81;UBERON:0001016,1.29e-12,89;UBERON:0000073,1.49e-09,53;UBERON:0002616,1.49e-09,53;UBERON:0003056,2.35e-09,61;UBERON:0001871,2.83e-09,6;UBERON:0001049,6.61e-09,56;UBERON:0005068,6.61e-09,56;UBERON:0006241,6.61e-09,56;UBERON:0007135,6.61e-09,56;UBERON:0000955,5.04e-08,68;UBERON:0006238,5.04e-08,68;UBERON:0002021,5.99e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0.309632246632152,0.919421224478927,0,0,0.232401601740905,0.710846162437108,9.68881449804996,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0.209658645508376,0.22465726229299,0,0.16072558669708,0,0,0,0,1.09227722252426,0.889509253863555,1.70692089026603,0.400395987036012,0,0.661044872784862,0.954053754535364,5.12291672198504,2.34894875748376,5.3518251937532,6.60856642895129,1.68152568894461,2.37045676297569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.130979075497713,0,0.370784442784429,0,0,0,5.24679373471752,4.0039643754609,6.3147775226026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29755719297581,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.576479813667846,0,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20559415430487,3.86644406388848,8.87836206272048,3.82763250991898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0.620304078368662,0,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.743212700502875,1.15415370381156,0.782560276832555,0.637705090915289,2.3949524571938,0.191505370132367,1.05836791361941,0.324621940274555,1.12318871245384,1.36940807419915,0,0,2.53937666702405,0.963528450622197,0.403599414382095,0,1.03051603426729,0,0.447352215784832,0,0.19538809540204,0,1.23087398947712,0,0.66614393599564,1.4098700508785,0,0,0.485442086998054,0,0,0,0.296964680832639,0,0,1.1253553312841,0,0,0,0,0.276283915531148,0,0.511343412510774,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.834912883456661,5.98841394003583,0,0,0,0.1137934482855,0,0,0,0,0.520874984799877,0,0.723578631752448,0,0.110579259931225,0,1.53569778007781,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,1.09886179476517,0,0,0,0,0,0.794682894901893,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,14.6914925582635,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,1.2029051231617,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,1.27746588066972,0,0,0,0.458320848023367,0,0.199679000498991,0,0.223171457441873,0.53746777989381,0,0,0,0,0,0,0,0,1.0896272488926,0,0.275078873194468,0,0.2249738915515,0,1.03274246318642,0,0,0,0.739202355635845,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0.314408610199332,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0.157054096250234,1.77213635993397,1.34228891392159,0.625954653532499,0,0.110929051536852,0,0,0.37494122388632,0,0,0,0,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.829550616910385,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0.622077260032973,2.04630994085843,0.215649622793364,0,0.655257829152084,0,0,0,0,0,0.157723490002507,0,0,0,0.706521476061055,0,0.319267718114302,1.8460472781668,12.8556565073076,1.59061680667701,2.09918339321406,0,0,0.11796972334774,0.366857197043358,0,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0,0.675375846183947,2.34323429584154,0.826747186004736,0.824405532520789,27.348740450911,0.548257766857182,0,0,0.255524855279191,0,0,0,0,0,0,0,0.543757863814654,0.920818829879887,0,0,0,0.628462359664008,0,0,0,0,0,0.158013611732727,0,2.78173235684127,0,0.207216164163037,0.3414369541879,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0.198950775161368,0.237840181555137,0.11294608203896,0,0,0,0.437119121007915,0,0.245148321753905,0,0,0,0,0,0.187967835959707,0.515663103788617,0,0.178553938605658,0,0,0,0,0,0.788857810965923,1.63179576458195,13.9632220908921,0,0,0,0,0,0.546327859818478,0,0.305966489225945,0.26721740526556,0.0918948995348449,0.250707539292375,0,0,0,0.310298987585686,0,0.476128862927481,1.29177819672012,0.620747142958579,0,0,0.808468755832877,0,0.342233301085281,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.61019034872821,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0.320568492303233 | ||
|short_description=p9@BCL11A | |short_description=p9@BCL11A | ||
}} | }} |
Latest revision as of 20:22, 17 September 2015
Short description: | p9@BCL11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_BCL11A_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -14bp_to_ENST00000358510_5end |
EntrezGene: | BCL11A |
HGNC: | 13221 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.90e-13 | 3 |
B cell | 1.04e-09 | 14 |
neuronal stem cell | 1.21e-08 | 8 |
neuron | 6.99e-07 | 6 |
neuroblast | 6.99e-07 | 6 |
electrically signaling cell | 6.99e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.84e-26 | 22 |
neocortex | 7.72e-25 | 20 |
cerebral cortex | 6.68e-23 | 25 |
pallium | 6.68e-23 | 25 |
regional part of telencephalon | 2.00e-17 | 32 |
cerebral hemisphere | 2.00e-17 | 32 |
brain grey matter | 2.90e-16 | 34 |
gray matter | 2.90e-16 | 34 |
telencephalon | 2.90e-16 | 34 |
regional part of forebrain | 4.46e-13 | 41 |
forebrain | 4.46e-13 | 41 |
anterior neural tube | 4.46e-13 | 41 |
future forebrain | 4.46e-13 | 41 |
central nervous system | 6.88e-13 | 81 |
nervous system | 1.29e-12 | 89 |
regional part of nervous system | 1.49e-09 | 53 |
regional part of brain | 1.49e-09 | 53 |
pre-chordal neural plate | 2.35e-09 | 61 |
temporal lobe | 2.83e-09 | 6 |
neural tube | 6.61e-09 | 56 |
neural rod | 6.61e-09 | 56 |
future spinal cord | 6.61e-09 | 56 |
neural keel | 6.61e-09 | 56 |
brain | 5.04e-08 | 68 |
future brain | 5.04e-08 | 68 |
occipital lobe | 5.99e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.18e-08 | 31 |
leukemia | 7.26e-08 | 39 |
hematologic cancer | 6.32e-07 | 51 |
immune system cancer | 6.32e-07 | 51 |