FFCP PHASE1:Hg19::chr14:70655309..70655322,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:70655309..70655322,-
|short_description=p5@SLC8A3
|description=CAGE_peak_5_at_SLC8A3_5end
|association_with_transcript=464bp_to_ENST00000356921,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6547 | |EntrezGene=6547 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11070 | |HGNC=11070 | ||
|TSSclassifier=strong | |||
|UniProt=Q96QG2,P57103,Q96QG1 | |UniProt=Q96QG2,P57103,Q96QG1 | ||
|association_with_transcript=464bp_to_ENST00000356921,ENST00000357887,ENST00000381269,ENST00000494208,NM_033262,NM_058240,NM_182932,NM_183002,uc001xlw.2,uc001xlx.2,uc001xly.2,uc001xlz.2,uc010ara.2_5end | |||
|cluster_id=chr14:70655309..70655322,- | |||
|description=CAGE_peak_5_at_SLC8A3_5end | |||
|id=chr14:70655309..70655322,- | |||
|ontology_enrichment_celltype=CL:0002274!1.11e-09!5;CL:0000457!1.11e-09!5;CL:0002191!1.11e-09!5;CL:0000097!1.11e-09!5;CL:0000831!1.11e-09!5;CL:0002028!1.11e-09!5;CL:0000080!4.33e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000097;6.34e-23;5!CL:0000037;1.51e-13;1!CL:0001024;1.51e-13;1!CL:0000163;4.99e-13;9!CL:0002393;3.56e-09;6!CL:0002397;3.56e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.46e-23,5;CL:0002028,5.46e-23,5;CL:0001024,1.83e-13,1;CL:0000163,4.60e-13,9;CL:0000988,4.67e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;8.05e-14;1!DOID:0050177;8.05e-14;1!DOID:0050427;8.05e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,9.73e-14,1;DOID:0050177,9.73e-14,1;DOID:0050427,9.73e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!8.97e-09!112;UBERON:0002390!1.92e-07!102;UBERON:0003061!1.92e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.82e-12;10!UBERON:0000178;3.30e-08;15!UBERON:0000179;3.30e-08;15!UBERON:0000463;3.30e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.82e-12,10;UBERON:0000358,4.82e-12,10;UBERON:0000307,4.82e-12,10;UBERON:0000091,4.82e-12,10;UBERON:0000087,4.82e-12,10;UBERON:0007010,4.82e-12,10;UBERON:0007806,4.82e-12,10;UBERON:0008780,4.82e-12,10;UBERON:0005728,4.82e-12,10;UBERON:0002390,3.58e-09,98;UBERON:0003061,3.58e-09,98;UBERON:0002193,3.12e-08,108;UBERON:0000178,3.30e-08,15;UBERON:0000179,3.30e-08,15;UBERON:0000463,3.30e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,1.17440175733939,0.553995408531877,2.4065333696417,1.30206522429511,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.0776922873857,59.9744162390244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,2.28060927094849,12.2501960404417,1.76739406796932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,26.0938593238947,18.6581547809219,19.944592355542,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0.13223260174269,0,0,0.106787412567695,2.51526888159466,0,0,0,0.243585196761792,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.539124056983409,0,0.218419276384028,0,0,0,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0.227662191351298,0,0.460935950223117,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.322289439867886,0,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,2.24397944612263 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,1.17440175733939,0.553995408531877,2.4065333696417,1.30206522429511,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.0776922873857,59.9744162390244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,2.28060927094849,12.2501960404417,1.76739406796932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,26.0938593238947,18.6581547809219,19.944592355542,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0.13223260174269,0,0,0.106787412567695,2.51526888159466,0,0,0,0.243585196761792,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.539124056983409,0,0.218419276384028,0,0,0,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0.227662191351298,0,0.460935950223117,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.322289439867886,0,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,2.24397944612263 | ||
|short_description=p5@SLC8A3 | |||
}} | }} |
Latest revision as of 20:12, 15 September 2015
Short description: | p5@SLC8A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC8A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 464bp_to_ENST00000356921, ENST00000357887, ENST00000381269, ENST00000494208, NM_033262, NM_058240, NM_182932, NM_183002, uc001xlw.2, uc001xlx.2, uc001xly.2, uc001xlz.2, uc010ara.2_5end |
EntrezGene: | SLC8A3 |
HGNC: | 11070 |
UniProt: | Q96QG2P57103Q96QG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.46e-23 | 5 |
basophil mast progenitor cell | 5.46e-23 | 5 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.83e-13 | 1 |
endocrine cell | 4.60e-13 | 9 |
hematopoietic cell | 4.67e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.82e-12 | 10 |
blastocyst | 4.82e-12 | 10 |
blastula | 4.82e-12 | 10 |
bilaminar disc | 4.82e-12 | 10 |
inner cell mass | 4.82e-12 | 10 |
cleaving embryo | 4.82e-12 | 10 |
connecting stalk | 4.82e-12 | 10 |
inner cell mass derived epiblast | 4.82e-12 | 10 |
extraembryonic mesoderm | 4.82e-12 | 10 |
hematopoietic system | 3.58e-09 | 98 |
blood island | 3.58e-09 | 98 |
hemolymphoid system | 3.12e-08 | 108 |
blood | 3.30e-08 | 15 |
haemolymphatic fluid | 3.30e-08 | 15 |
organism substance | 3.30e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 9.73e-14 | 1 |
monogenic disease | 9.73e-14 | 1 |
xeroderma pigmentosum | 9.73e-14 | 1 |