FFCP PHASE1:Hg19::chr2:95831529..95831569,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7549 | |EntrezGene=7549 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12991 | |HGNC=12991 | ||
|TSSclassifier=strong | |||
|UniProt=B4DIR4,E9PCG2 | |UniProt=B4DIR4,E9PCG2 | ||
|association_with_transcript=0bp_to_ENST00000295210,ENST00000453539_5end | |association_with_transcript=0bp_to_ENST00000295210,ENST00000453539_5end | ||
|cluster_id=chr2:95831529..95831569,+ | |||
|description=CAGE_peak_1_at_ZNF2_5end | |description=CAGE_peak_1_at_ZNF2_5end | ||
|id=chr2:95831529..95831569,+ | |id=chr2:95831529..95831569,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.28e-16!115;UBERON:0001049!2.45e-16!57;UBERON:0005068!2.45e-16!57;UBERON:0006241!2.45e-16!57;UBERON:0007135!2.45e-16!57;UBERON:0005743!1.62e-14!86;UBERON:0001017!1.93e-14!82;UBERON:0000955!8.01e-14!69;UBERON:0006238!8.01e-14!69;UBERON:0002616!8.33e-14!59;UBERON:0003080!1.22e-13!42;UBERON:0002780!2.87e-13!41;UBERON:0001890!2.87e-13!41;UBERON:0006240!2.87e-13!41;UBERON:0000924!4.54e-13!173;UBERON:0006601!4.54e-13!173;UBERON:0000073!5.39e-13!94;UBERON:0001016!5.39e-13!94;UBERON:0002346!1.38e-12!90;UBERON:0004121!2.39e-12!169;UBERON:0003075!7.98e-12!86;UBERON:0007284!7.98e-12!86;UBERON:0000153!1.75e-11!129;UBERON:0007811!1.75e-11!129;UBERON:0000033!2.41e-11!123;UBERON:0001893!1.69e-10!34;UBERON:0002791!5.86e-10!33;UBERON:0002020!7.95e-10!34;UBERON:0003528!7.95e-10!34;UBERON:0003056!1.19e-09!61;UBERON:0001869!1.73e-09!32;UBERON:0000475!1.06e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.76e-10;41!UBERON:0001890;6.76e-10;41!UBERON:0000073;2.71e-09;53!UBERON:0002616;2.71e-09;53!UBERON:0001893;4.46e-09;34!UBERON:0003528;9.08e-09;34!UBERON:0002020;9.08e-09;34!UBERON:0001869;1.28e-08;32!UBERON:0002791;1.69e-08;32!UBERON:0001017;4.21e-07;75!UBERON:0000956;9.12e-07;25!UBERON:0000203;9.12e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.77e-16,56;UBERON:0005068,5.77e-16,56;UBERON:0006241,5.77e-16,56;UBERON:0007135,5.77e-16,56;UBERON:0007023,6.15e-16,114;UBERON:0000073,1.16e-14,53;UBERON:0002616,1.16e-14,53;UBERON:0001017,4.30e-14,81;UBERON:0000955,1.81e-13,68;UBERON:0006238,1.81e-13,68;UBERON:0002780,2.85e-13,41;UBERON:0001890,2.85e-13,41;UBERON:0003080,2.85e-13,41;UBERON:0006240,2.85e-13,41;UBERON:0004121,7.75e-13,171;UBERON:0000924,7.75e-13,171;UBERON:0006601,7.75e-13,171;UBERON:0002346,1.30e-12,86;UBERON:0001016,1.63e-12,89;UBERON:0003075,7.57e-12,82;UBERON:0007284,7.57e-12,82;UBERON:0010371,4.65e-11,104;UBERON:0001893,1.68e-10,34;UBERON:0003528,7.90e-10,34;UBERON:0002020,7.90e-10,34;UBERON:0003056,8.87e-10,61;UBERON:0001869,1.72e-09,32;UBERON:0002791,2.03e-09,32;UBERON:0010314,9.47e-08,132;UBERON:0011216,7.38e-07,223 | |||
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| ||
|short_description=p1@ZNF2 | |short_description=p1@ZNF2 | ||
}} | }} |
Latest revision as of 23:30, 18 September 2015
Short description: | p1@ZNF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000295210, ENST00000453539_5end |
EntrezGene: | ZNF2 |
HGNC: | 12991 |
UniProt: | B4DIR4E9PCG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 5.77e-16 | 56 |
neural rod | 5.77e-16 | 56 |
future spinal cord | 5.77e-16 | 56 |
neural keel | 5.77e-16 | 56 |
adult organism | 6.15e-16 | 114 |
regional part of nervous system | 1.16e-14 | 53 |
regional part of brain | 1.16e-14 | 53 |
central nervous system | 4.30e-14 | 81 |
brain | 1.81e-13 | 68 |
future brain | 1.81e-13 | 68 |
regional part of forebrain | 2.85e-13 | 41 |
forebrain | 2.85e-13 | 41 |
anterior neural tube | 2.85e-13 | 41 |
future forebrain | 2.85e-13 | 41 |
ectoderm-derived structure | 7.75e-13 | 171 |
ectoderm | 7.75e-13 | 171 |
presumptive ectoderm | 7.75e-13 | 171 |
neurectoderm | 1.30e-12 | 86 |
nervous system | 1.63e-12 | 89 |
neural plate | 7.57e-12 | 82 |
presumptive neural plate | 7.57e-12 | 82 |
ecto-epithelium | 4.65e-11 | 104 |
telencephalon | 1.68e-10 | 34 |
brain grey matter | 7.90e-10 | 34 |
gray matter | 7.90e-10 | 34 |
pre-chordal neural plate | 8.87e-10 | 61 |
cerebral hemisphere | 1.72e-09 | 32 |
regional part of telencephalon | 2.03e-09 | 32 |
structure with developmental contribution from neural crest | 9.47e-08 | 132 |
organ system subdivision | 7.38e-07 | 223 |