FFCP PHASE1:Hg19::chr3:124826998..124827046,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84561 | |EntrezGene=84561 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=15595 | |HGNC=15595 | ||
|TSSclassifier=strong | |||
|UniProt=A0AV02 | |UniProt=A0AV02 | ||
|association_with_transcript=-187bp_to_CR457363_5end | |association_with_transcript=-187bp_to_CR457363_5end | ||
|cluster_id=chr3:124826998..124827046,- | |||
|description=CAGE_peak_6_at_SLC12A8_5end | |description=CAGE_peak_6_at_SLC12A8_5end | ||
|id=chr3:124826998..124827046,- | |id=chr3:124826998..124827046,- | ||
|ontology_enrichment_celltype=CL:0000548!3.49e-12!679;CL:0000004!3.49e-12!679;CL:0000255!3.49e-12!679;CL:0000012!8.48e-12!682;CL:0000144!8.41e-11!625;CL:0000048!1.11e-09!430;CL:0002371!1.31e-09!591;CL:0000723!1.80e-09!436;CL:0002194!2.60e-09!63;CL:0000576!2.60e-09!63;CL:0000040!2.60e-09!63;CL:0000559!2.60e-09!63;CL:0000003!1.15e-08!722;CL:0002009!1.18e-08!65;CL:0000034!1.56e-08!444;CL:0000839!1.98e-08!70;CL:0000557!3.86e-08!71;CL:0002320!4.56e-08!365;CL:0000134!1.08e-07!358;CL:0000057!1.29e-07!75;CL:0000063!2.72e-07!578;CL:0000766!7.73e-07!76;CL:0000219!8.87e-07!390 | |ontology_enrichment_celltype=CL:0000548!3.49e-12!679;CL:0000004!3.49e-12!679;CL:0000255!3.49e-12!679;CL:0000012!8.48e-12!682;CL:0000144!8.41e-11!625;CL:0000048!1.11e-09!430;CL:0002371!1.31e-09!591;CL:0000723!1.80e-09!436;CL:0002194!2.60e-09!63;CL:0000576!2.60e-09!63;CL:0000040!2.60e-09!63;CL:0000559!2.60e-09!63;CL:0000003!1.15e-08!722;CL:0002009!1.18e-08!65;CL:0000034!1.56e-08!444;CL:0000839!1.98e-08!70;CL:0000557!3.86e-08!71;CL:0002320!4.56e-08!365;CL:0000134!1.08e-07!358;CL:0000057!1.29e-07!75;CL:0000063!2.72e-07!578;CL:0000766!7.73e-07!76;CL:0000219!8.87e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.03e-11;39!CL:0000234;2.03e-11;39!CL:0000235;3.57e-11;6!CL:0000860;1.68e-07;33!CL:0002057;1.68e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.06e-12,59;CL:0000576,3.06e-12,59;CL:0000040,3.06e-12,59;CL:0000559,3.06e-12,59;CL:0002009,1.12e-11,61;CL:0000839,1.12e-11,66;CL:0000473,1.50e-11,48;CL:0000234,1.50e-11,48;CL:0000557,1.99e-11,67;CL:0000235,3.53e-11,6;CL:0000766,2.80e-10,72;CL:0000048,3.26e-09,427;CL:0000723,7.00e-09,433;CL:0000034,1.87e-08,441;CL:0000134,2.91e-08,354;CL:0002320,7.37e-08,361;CL:0000219,2.03e-07,386;CL:0002031,4.72e-07,120;CL:0002087,7.65e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.19e-10!167;UBERON:0002384!1.18e-08!375;UBERON:0002371!4.12e-08!80;UBERON:0004765!8.51e-08!101;UBERON:0001434!8.51e-08!101;UBERON:0001474!3.78e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.26e-07;6!UBERON:0002358;6.26e-07;6!UBERON:0003684;6.26e-07;6!UBERON:0001178;6.26e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.57e-10,76;UBERON:0001474,2.26e-09,82;UBERON:0004765,4.74e-09,90;UBERON:0002405,1.50e-08,93;UBERON:0001434,1.86e-08,100;UBERON:0002384,7.95e-08,371;UBERON:0002204,3.62e-07,167;UBERON:0000926,4.72e-07,315;UBERON:0004120,4.72e-07,315;UBERON:0006603,4.72e-07,315;UBERON:0002390,5.20e-07,98;UBERON:0003061,5.20e-07,98;UBERON:0003081,6.99e-07,203 | |||
|phase1_expression=0.181678379270557,1.07050261945492,2.11431606143957,1.0007329835313,0.893922188854576,0,0,1.26343974685366,0.522371256399677,0.245733936501509,0,0,0,0.123766352960047,0,0,1.20538905604795,0,0.487932798790507,0,0,0.626909442956176,0,0,0,1.60468152070698,0.57470412614962,1.96776953284198,0,0,0,0,0,0,0,0.568676929949686,0,0,0,0,0.223915474239924,0.647787332037959,0.257575567634187,0.145398238779565,0,0,1.16214518452842,0.822335776043652,0.619412741790207,1.7261543539329,3.07392847834921,1.18241114944293,0,1.93645405075148,0,0.188242339542605,1.91034305040492,0.674170453335254,0,0.962787081228281,0.639337125799041,1.64925650093358,1.19678194572979,0.852449501065388,0,0,0,4.27122730936464,3.65038042894141,1.08594422352558,0.605399502633369,3.31449872388808,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,0.722878304769133,0,0.579386075843295,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0,0.364295288292542,0.370784442784429,1.9472843619281,1.21890816109487,1.72845348674525,0,0,0,0.596287222100115,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0.436094052142534,0.993943903390637,0.633152558322899,2.51577443545116,2.29469296599051,0.709336764396714,0,0,0.98667019366864,0.622422070799533,0.134710672069688,0.326923806226917,0.302714855289863,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0.826606249406124,3.56400857184616,0.247266929278557,0,1.43723628363248,0,0.125118519871964,0,0.438977620880838,1.22595118319608,0.300476117813194,0.113432183160021,0,0,0.211931901159562,0.300091096084402,0.412210116953756,0.515281080091258,0.37223371266318,0.675105328965065,0.0974370051611986,0,0.0920498986422993,1.13152239773168,0.355009592516614,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.110293972732394,0.435758888184812,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,2.23076519048061,0,0,0,0,0,1.47730203652438,3.7440682422278,2.0808362720422,1.87467667973554,0,0,0.358234090811393,0,0,1.47798971368783,0.176096868026452,0,0,0,0,0.763976851116555,0,0,0,0,0,0,0,0,2.58543431515556,0,0,0.531876233169741,0,0,0,0,2.28764789853036,0,0,0,1.06617584622764,0,3.61727252471503,0,0.799783929456456,1.2162378064119,0,4.21667878966063,0,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0,0,1.03985430765404,0.535286966391485,0.630809660135739,0.234282829985426,0.300946099727719,0,0,0,0,0,0.587403472388222,0.343143423810856,0,0,0,0,0,0,1.48864684691266,0.153461973288062,0.561320188866147,1.66580894032411,1.02341449813341,0.321707842287215,0,0,0.177561725313127,0,2.07701771673448,0,0,0.200506470303285,0,2.29628896329214,0.182091168006717,1.31124414959424,0.451199612907412,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0.267096106940212,0.330569830721956,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.632758849437452,1.90630193923825,0,0,0.636406495851874,0.78494864019923,0.359744915166629,0.274537029736055,0,0.202182481573316,0,0.842516912477962,0,0.974853958525138,1.05650146756755,0.409499734223957,2.12108147930569,1.13008116620243,1.10273068709225,0.66343897524122,0,1.15755106853338,0.655894752046633,0.202910376962704,0,0,0,0.196498082026242,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.984685914873589,0.333926115068718,5.93293947216335,0,0,0.276283915531148,0,0.511343412510774,0.861593638227486,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0.0769502585037971,0.797594390929008,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0.489961987071888,0.261177619741208,0,0,0.677294319023596,0.365446585430928,0.410577285266046,0.193978032976839,0,0,0.274083849293502,0,0.0633107959558787,0,1.28254112402454,0,0,0,0,0,0,0.621262677827163,0.942776138467182,0,0.209205692624666,1.01998217636322,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.590564889088493,0,0,0.544813624446302,0,0,0,0,0,0,1.0063040627978,0,0.0524545881349981,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.470531639396343,0,0,0.149254802886874,0.467426619694449,1.66441758450784,0,0.50313580350515,0.889811221596536,9.38244280427387,1.05861646634267,1.08806040407946,0.73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| |phase1_expression=0.181678379270557,1.07050261945492,2.11431606143957,1.0007329835313,0.893922188854576,0,0,1.26343974685366,0.522371256399677,0.245733936501509,0,0,0,0.123766352960047,0,0,1.20538905604795,0,0.487932798790507,0,0,0.626909442956176,0,0,0,1.60468152070698,0.57470412614962,1.96776953284198,0,0,0,0,0,0,0,0.568676929949686,0,0,0,0,0.223915474239924,0.647787332037959,0.257575567634187,0.145398238779565,0,0,1.16214518452842,0.822335776043652,0.619412741790207,1.7261543539329,3.07392847834921,1.18241114944293,0,1.93645405075148,0,0.188242339542605,1.91034305040492,0.674170453335254,0,0.962787081228281,0.639337125799041,1.64925650093358,1.19678194572979,0.852449501065388,0,0,0,4.27122730936464,3.65038042894141,1.08594422352558,0.605399502633369,3.31449872388808,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,0.722878304769133,0,0.579386075843295,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0,0.364295288292542,0.370784442784429,1.9472843619281,1.21890816109487,1.72845348674525,0,0,0,0.596287222100115,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0.436094052142534,0.993943903390637,0.633152558322899,2.51577443545116,2.29469296599051,0.709336764396714,0,0,0.98667019366864,0.622422070799533,0.134710672069688,0.326923806226917,0.302714855289863,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0.826606249406124,3.56400857184616,0.247266929278557,0,1.43723628363248,0,0.125118519871964,0,0.438977620880838,1.22595118319608,0.300476117813194,0.113432183160021,0,0,0.211931901159562,0.300091096084402,0.412210116953756,0.515281080091258,0.37223371266318,0.675105328965065,0.0974370051611986,0,0.0920498986422993,1.13152239773168,0.355009592516614,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.110293972732394,0.435758888184812,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,2.23076519048061,0,0,0,0,0,1.47730203652438,3.7440682422278,2.0808362720422,1.87467667973554,0,0,0.358234090811393,0,0,1.47798971368783,0.176096868026452,0,0,0,0,0.763976851116555,0,0,0,0,0,0,0,0,2.58543431515556,0,0,0.531876233169741,0,0,0,0,2.28764789853036,0,0,0,1.06617584622764,0,3.61727252471503,0,0.799783929456456,1.2162378064119,0,4.21667878966063,0,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0,0,1.03985430765404,0.535286966391485,0.630809660135739,0.234282829985426,0.300946099727719,0,0,0,0,0,0.587403472388222,0.343143423810856,0,0,0,0,0,0,1.48864684691266,0.153461973288062,0.561320188866147,1.66580894032411,1.02341449813341,0.321707842287215,0,0,0.177561725313127,0,2.07701771673448,0,0,0.200506470303285,0,2.29628896329214,0.182091168006717,1.31124414959424,0.451199612907412,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0.267096106940212,0.330569830721956,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.632758849437452,1.90630193923825,0,0,0.636406495851874,0.78494864019923,0.359744915166629,0.274537029736055,0,0.202182481573316,0,0.842516912477962,0,0.974853958525138,1.05650146756755,0.409499734223957,2.12108147930569,1.13008116620243,1.10273068709225,0.66343897524122,0,1.15755106853338,0.655894752046633,0.202910376962704,0,0,0,0.196498082026242,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.984685914873589,0.333926115068718,5.93293947216335,0,0,0.276283915531148,0,0.511343412510774,0.861593638227486,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0.0769502585037971,0.797594390929008,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0.489961987071888,0.261177619741208,0,0,0.677294319023596,0.365446585430928,0.410577285266046,0.193978032976839,0,0,0.274083849293502,0,0.0633107959558787,0,1.28254112402454,0,0,0,0,0,0,0.621262677827163,0.942776138467182,0,0.209205692624666,1.01998217636322,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.590564889088493,0,0,0.544813624446302,0,0,0,0,0,0,1.0063040627978,0,0.0524545881349981,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.470531639396343,0,0,0.149254802886874,0.467426619694449,1.66441758450784,0,0.50313580350515,0.889811221596536,9.38244280427387,1.05861646634267,1.08806040407946,0.73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| ||
|short_description=p6@SLC12A8 | |short_description=p6@SLC12A8 | ||
}} | }} |
Latest revision as of 03:14, 20 September 2015
Short description: | p6@SLC12A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC12A8_5end |
Coexpression cluster: | NA |
Association with transcript: | -187bp_to_CR457363_5end |
EntrezGene: | SLC12A8 |
HGNC: | 15595 |
UniProt: | A0AV02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.06e-12 | 59 |
monocyte | 3.06e-12 | 59 |
monoblast | 3.06e-12 | 59 |
promonocyte | 3.06e-12 | 59 |
macrophage dendritic cell progenitor | 1.12e-11 | 61 |
myeloid lineage restricted progenitor cell | 1.12e-11 | 66 |
defensive cell | 1.50e-11 | 48 |
phagocyte | 1.50e-11 | 48 |
granulocyte monocyte progenitor cell | 1.99e-11 | 67 |
macrophage | 3.53e-11 | 6 |
myeloid leukocyte | 2.80e-10 | 72 |
multi fate stem cell | 3.26e-09 | 427 |
somatic stem cell | 7.00e-09 | 433 |
stem cell | 1.87e-08 | 441 |
mesenchymal cell | 2.91e-08 | 354 |
connective tissue cell | 7.37e-08 | 361 |
motile cell | 2.03e-07 | 386 |
hematopoietic lineage restricted progenitor cell | 4.72e-07 | 120 |
nongranular leukocyte | 7.65e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.57e-10 | 76 |
bone element | 2.26e-09 | 82 |
skeletal element | 4.74e-09 | 90 |
immune system | 1.50e-08 | 93 |
skeletal system | 1.86e-08 | 100 |
connective tissue | 7.95e-08 | 371 |
musculoskeletal system | 3.62e-07 | 167 |
mesoderm | 4.72e-07 | 315 |
mesoderm-derived structure | 4.72e-07 | 315 |
presumptive mesoderm | 4.72e-07 | 315 |
hematopoietic system | 5.20e-07 | 98 |
blood island | 5.20e-07 | 98 |
lateral plate mesoderm | 6.99e-07 | 203 |