FFCP PHASE1:Hg19::chr3:132378897..132378913,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84129 | |EntrezGene=84129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30211 | |HGNC=30211 | ||
|TSSclassifier=strong | |||
|UniProt=F8WEV0,Q08AE9 | |UniProt=F8WEV0,Q08AE9 | ||
|association_with_transcript=0bp_to_ENST00000485198,ENST00000489991,ENST00000545291_5end | |association_with_transcript=0bp_to_ENST00000485198,ENST00000489991,ENST00000545291_5end | ||
|cluster_id=chr3:132378897..132378913,- | |||
|description=CAGE_peak_3_at_ACAD11_5end | |description=CAGE_peak_3_at_ACAD11_5end | ||
|id=chr3:132378897..132378913,- | |id=chr3:132378897..132378913,- | ||
|ontology_enrichment_celltype=CL:0000542!5.77e-11!53;CL:0000051!5.77e-11!53;CL:0000838!1.02e-10!52;CL:0000791!3.64e-07!18;CL:0000789!3.64e-07!18;CL:0002420!3.64e-07!18;CL:0002419!3.64e-07!18;CL:0000790!3.64e-07!18;CL:0000945!3.93e-07!24;CL:0000826!3.93e-07!24 | |ontology_enrichment_celltype=CL:0000542!5.77e-11!53;CL:0000051!5.77e-11!53;CL:0000838!1.02e-10!52;CL:0000791!3.64e-07!18;CL:0000789!3.64e-07!18;CL:0002420!3.64e-07!18;CL:0002419!3.64e-07!18;CL:0000790!3.64e-07!18;CL:0000945!3.93e-07!24;CL:0000826!3.93e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.13e-07;24!CL:0000791;2.71e-07;18!CL:0000789;2.71e-07;18!CL:0002419;2.71e-07;18!CL:0000542;2.96e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.99e-11,53;CL:0000051,1.99e-11,53;CL:0000838,3.86e-11,52;CL:0000945,2.07e-07,24;CL:0000826,2.07e-07,24;CL:0000791,2.96e-07,18;CL:0000789,2.96e-07,18;CL:0002420,2.96e-07,18;CL:0002419,2.96e-07,18;CL:0000790,2.96e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;2.71e-07;18!CL:0000051;2.96e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.37e-19!115;UBERON:0001049!5.80e-11!57;UBERON:0005068!5.80e-11!57;UBERON:0006241!5.80e-11!57;UBERON:0007135!5.80e-11!57;UBERON:0002780!1.18e-10!41;UBERON:0001890!1.18e-10!41;UBERON:0006240!1.18e-10!41;UBERON:0003080!7.50e-10!42;UBERON:0002616!2.77e-09!59;UBERON:0002020!4.56e-09!34;UBERON:0003528!4.56e-09!34;UBERON:0001893!4.93e-09!34;UBERON:0002791!1.17e-08!33;UBERON:0000955!1.50e-08!69;UBERON:0006238!1.50e-08!69;UBERON:0001869!3.57e-08!32;UBERON:0001017!4.27e-08!82;UBERON:0000073!8.37e-08!94;UBERON:0001016!8.37e-08!94;UBERON:0005743!1.54e-07!86;UBERON:0002619!2.10e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.50e-07;41!UBERON:0001890;1.50e-07;41!UBERON:0003528;5.39e-07;34!UBERON:0002020;5.39e-07;34!UBERON:0000073;5.82e-07;53!UBERON:0002616;5.82e-07;53!UBERON:0002791;9.47e-07;32!UBERON:0001893;9.84e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.15e-21,114;UBERON:0001049,1.25e-12,56;UBERON:0005068,1.25e-12,56;UBERON:0006241,1.25e-12,56;UBERON:0007135,1.25e-12,56;UBERON:0000073,2.66e-12,53;UBERON:0002616,2.66e-12,53;UBERON:0002780,5.66e-11,41;UBERON:0001890,5.66e-11,41;UBERON:0003080,5.66e-11,41;UBERON:0006240,5.66e-11,41;UBERON:0000955,8.80e-10,68;UBERON:0006238,8.80e-10,68;UBERON:0003528,2.33e-09,34;UBERON:0002020,2.33e-09,34;UBERON:0001893,2.55e-09,34;UBERON:0001016,7.80e-09,89;UBERON:0001017,1.44e-08,81;UBERON:0002791,1.70e-08,32;UBERON:0001869,2.50e-08,32;UBERON:0002619,1.37e-07,22;UBERON:0002346,3.08e-07,86;UBERON:0003075,4.20e-07,82;UBERON:0007284,4.20e-07,82 | |||
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| ||
|short_description=p3@ACAD11 | |short_description=p3@ACAD11 | ||
}} | }} |
Latest revision as of 20:32, 24 September 2015
Short description: | p3@ACAD11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ACAD11_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000485198, ENST00000489991, ENST00000545291_5end |
EntrezGene: | ACAD11 |
HGNC: | 30211 |
UniProt: | F8WEV0Q08AE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.99e-11 | 53 |
common lymphoid progenitor | 1.99e-11 | 53 |
lymphoid lineage restricted progenitor cell | 3.86e-11 | 52 |
lymphocyte of B lineage | 2.07e-07 | 24 |
pro-B cell | 2.07e-07 | 24 |
mature alpha-beta T cell | 2.96e-07 | 18 |
alpha-beta T cell | 2.96e-07 | 18 |
immature T cell | 2.96e-07 | 18 |
mature T cell | 2.96e-07 | 18 |
immature alpha-beta T cell | 2.96e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.15e-21 | 114 |
neural tube | 1.25e-12 | 56 |
neural rod | 1.25e-12 | 56 |
future spinal cord | 1.25e-12 | 56 |
neural keel | 1.25e-12 | 56 |
regional part of nervous system | 2.66e-12 | 53 |
regional part of brain | 2.66e-12 | 53 |
regional part of forebrain | 5.66e-11 | 41 |
forebrain | 5.66e-11 | 41 |
anterior neural tube | 5.66e-11 | 41 |
future forebrain | 5.66e-11 | 41 |
brain | 8.80e-10 | 68 |
future brain | 8.80e-10 | 68 |
brain grey matter | 2.33e-09 | 34 |
gray matter | 2.33e-09 | 34 |
telencephalon | 2.55e-09 | 34 |
nervous system | 7.80e-09 | 89 |
central nervous system | 1.44e-08 | 81 |
regional part of telencephalon | 1.70e-08 | 32 |
cerebral hemisphere | 2.50e-08 | 32 |
regional part of cerebral cortex | 1.37e-07 | 22 |
neurectoderm | 3.08e-07 | 86 |
neural plate | 4.20e-07 | 82 |
presumptive neural plate | 4.20e-07 | 82 |