FFCP PHASE1:Hg19::chr14:90863344..90863356,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:90863344..90863356,+
|short_description=p11@CALM3,p13@CALM1,p9@CALM2
|description=CAGE_peak_11_at_CALM3_5end,CAGE_peak_13_at_CALM1_5end,CAGE_peak_9_at_CALM...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=801,805,808 | |EntrezGene=801,805,808 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1442,1445,1449 | |HGNC=1442,1445,1449 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETZ0,P62158 | |UniProt=E7ETZ0,P62158 | ||
|association_with_transcript=-16bp_to_ENST00000447653,uc001xyl.1,uc010atq.1,uc010atr.1_5end | |||
|cluster_id=chr14:90863344..90863356,+ | |||
|coexpression_cluster_id=C1401 | |||
|description=CAGE_peak_11_at_CALM3_5end,CAGE_peak_13_at_CALM1_5end,CAGE_peak_9_at_CALM2_5end | |||
|id=chr14:90863344..90863356,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.75e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.23e-20!82;UBERON:0005743!6.45e-19!86;UBERON:0001049!2.89e-18!57;UBERON:0005068!2.89e-18!57;UBERON:0006241!2.89e-18!57;UBERON:0007135!2.89e-18!57;UBERON:0002616!2.41e-17!59;UBERON:0000073!4.16e-17!94;UBERON:0001016!4.16e-17!94;UBERON:0000955!1.81e-16!69;UBERON:0006238!1.81e-16!69;UBERON:0002780!3.88e-16!41;UBERON:0001890!3.88e-16!41;UBERON:0006240!3.88e-16!41;UBERON:0002020!2.40e-15!34;UBERON:0003528!2.40e-15!34;UBERON:0001893!2.90e-15!34;UBERON:0003080!4.04e-15!42;UBERON:0001869!7.82e-15!32;UBERON:0002791!1.27e-14!33;UBERON:0002619!4.62e-12!22;UBERON:0007023!4.68e-12!115;UBERON:0000956!2.32e-11!25;UBERON:0000203!2.32e-11!25;UBERON:0001950!5.56e-11!20;UBERON:0003075!1.93e-10!86;UBERON:0007284!1.93e-10!86;UBERON:0004121!5.00e-10!169;UBERON:0000924!4.70e-09!173;UBERON:0006601!4.70e-09!173;UBERON:0002346!5.30e-09!90;UBERON:0000153!1.60e-08!129;UBERON:0007811!1.60e-08!129;UBERON:0000033!1.62e-08!123;UBERON:0003056!2.14e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.33e-27;22!UBERON:0001869;1.50e-25;32!UBERON:0003528;4.26e-25;34!UBERON:0002020;4.26e-25;34!UBERON:0001893;1.38e-24;34!UBERON:0001950;3.19e-24;20!UBERON:0002791;2.11e-23;32!UBERON:0000956;4.12e-23;25!UBERON:0000203;4.12e-23;25!UBERON:0002780;2.74e-22;41!UBERON:0001890;2.74e-22;41!UBERON:0000073;2.90e-20;53!UBERON:0002616;2.90e-20;53!UBERON:0000955;1.81e-16;68!UBERON:0001017;8.52e-14;75!UBERON:0000200;4.13e-12;6!UBERON:0001016;7.79e-11;83!UBERON:0000349;2.19e-09;5!UBERON:0007023;9.58e-09;114!UBERON:0002680;3.02e-07;9!UBERON:0001895;3.02e-07;9!UBERON:0002420;3.48e-07;9!UBERON:0007245;3.48e-07;9!UBERON:0010009;3.48e-07;9!UBERON:0010011;3.48e-07;9!UBERON:0000454;3.48e-07;9!UBERON:0001872;3.82e-07;5!UBERON:0000125;4.28e-07;9!UBERON:0002308;4.28e-07;9!UBERON:0004733;4.61e-07;12!UBERON:0002028;4.61e-07;12!UBERON:0001870;4.91e-07;3!UBERON:0001871;5.69e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.78e-38,53;UBERON:0002616,2.78e-38,53;UBERON:0001049,6.00e-38,56;UBERON:0005068,6.00e-38,56;UBERON:0006241,6.00e-38,56;UBERON:0007135,6.00e-38,56;UBERON:0001017,1.21e-37,81;UBERON:0000955,1.97e-34,68;UBERON:0006238,1.97e-34,68;UBERON:0001016,1.64e-32,89;UBERON:0002780,2.64e-32,41;UBERON:0001890,2.64e-32,41;UBERON:0003080,2.64e-32,41;UBERON:0006240,2.64e-32,41;UBERON:0003528,1.18e-29,34;UBERON:0002020,1.18e-29,34;UBERON:0001893,1.86e-29,34;UBERON:0001869,2.37e-29,32;UBERON:0002619,1.97e-27,22;UBERON:0002791,1.40e-26,32;UBERON:0007023,6.84e-25,114;UBERON:0001950,1.99e-24,20;UBERON:0003075,1.31e-23,82;UBERON:0007284,1.31e-23,82;UBERON:0000956,1.49e-23,25;UBERON:0000203,1.49e-23,25;UBERON:0002346,5.62e-22,86;UBERON:0010371,1.30e-19,104;UBERON:0003056,7.39e-19,61;UBERON:0004121,6.28e-18,171;UBERON:0000924,6.28e-18,171;UBERON:0006601,6.28e-18,171;UBERON:0010314,1.46e-17,132;UBERON:0000200,2.07e-12,6;UBERON:0011216,2.11e-11,223;UBERON:0000349,4.72e-10,5;UBERON:0002420,1.15e-07,9;UBERON:0007245,1.15e-07,9;UBERON:0010009,1.15e-07,9;UBERON:0010011,1.15e-07,9;UBERON:0000454,1.15e-07,9;UBERON:0002680,1.43e-07,9;UBERON:0001895,1.43e-07,9;UBERON:0010092,1.43e-07,9;UBERON:0000125,1.45e-07,9;UBERON:0002308,1.45e-07,9;UBERON:0001871,2.38e-07,6;UBERON:0004733,2.59e-07,12;UBERON:0002028,2.59e-07,12;UBERON:0007277,2.59e-07,12;UBERON:0003076,2.95e-07,15;UBERON:0003057,2.95e-07,15;UBERON:0001870,4.34e-07,3;UBERON:0001872,5.46e-07,5;UBERON:0000988,8.89e-07,3 | |||
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| ||
|short_description=p11@CALM3,p13@CALM1,p9@CALM2 | |||
}} | }} |
Latest revision as of 12:08, 16 September 2015
Short description: | p11@CALM3, p13@CALM1, p9@CALM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CALM3_5end, CAGE_peak_13_at_CALM1_5end, CAGE_peak_9_at_CALM2_5end |
Coexpression cluster: | C1401_Smooth_Fibroblast_leiomyoma_malignant_Small_Skeletal_Preadipocyte |
Association with transcript: | -16bp_to_ENST00000447653, uc001xyl.1, uc010atq.1, uc010atr.1_5end |
EntrezGene: | 801,805,808 |
HGNC: | 1445, 1449&submit=Submit 1442, 1445, 1449 |
UniProt: | E7ETZ0P62158 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data