FFCP PHASE1:Hg19::chr3:195627624..195627639,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:195627624..195627639,- | |||
|coexpression_cluster_id=C1163 | |||
|description=CAGE_peak_at_chr3:195627624..195627639,- | |description=CAGE_peak_at_chr3:195627624..195627639,- | ||
|id=chr3:195627624..195627639,- | |id=chr3:195627624..195627639,- | ||
|ontology_enrichment_celltype=CL:0002057!7.22e-52!42;CL:0000766!1.17e-49!76;CL:0000860!2.08e-47!45;CL:0000763!2.00e-44!112;CL:0000049!2.00e-44!112;CL:0000557!4.99e-40!71;CL:0000037!3.86e-38!172;CL:0000566!3.86e-38!172;CL:0000839!4.92e-37!70;CL:0002009!1.13e-35!65;CL:0000738!1.33e-35!140;CL:0002194!1.54e-35!63;CL:0000576!1.54e-35!63;CL:0000040!1.54e-35!63;CL:0000559!1.54e-35!63;CL:0000988!1.25e-34!182;CL:0002032!9.47e-33!165;CL:0000837!9.47e-33!165;CL:0002087!5.84e-24!119;CL:0002031!6.76e-24!124;CL:0000134!1.14e-15!358;CL:0002393!2.37e-15!9;CL:0002397!2.37e-15!9;CL:0002320!7.53e-15!365;CL:0000219!4.65e-14!390;CL:0000094!1.19e-13!8;CL:0000034!6.65e-10!444;CL:0000048!1.39e-09!430;CL:0000081!2.48e-09!11;CL:0000723!4.17e-09!436 | |ontology_enrichment_celltype=CL:0002057!7.22e-52!42;CL:0000766!1.17e-49!76;CL:0000860!2.08e-47!45;CL:0000763!2.00e-44!112;CL:0000049!2.00e-44!112;CL:0000557!4.99e-40!71;CL:0000037!3.86e-38!172;CL:0000566!3.86e-38!172;CL:0000839!4.92e-37!70;CL:0002009!1.13e-35!65;CL:0000738!1.33e-35!140;CL:0002194!1.54e-35!63;CL:0000576!1.54e-35!63;CL:0000040!1.54e-35!63;CL:0000559!1.54e-35!63;CL:0000988!1.25e-34!182;CL:0002032!9.47e-33!165;CL:0000837!9.47e-33!165;CL:0002087!5.84e-24!119;CL:0002031!6.76e-24!124;CL:0000134!1.14e-15!358;CL:0002393!2.37e-15!9;CL:0002397!2.37e-15!9;CL:0002320!7.53e-15!365;CL:0000219!4.65e-14!390;CL:0000094!1.19e-13!8;CL:0000034!6.65e-10!444;CL:0000048!1.39e-09!430;CL:0000081!2.48e-09!11;CL:0000723!4.17e-09!436 | ||
|ontology_enrichment_celltype_v019=CL:0000576;3.06e-32;48!CL:0000094;8.86e-31;8!CL:0000860;1.91e-27;33!CL:0002057;1.91e-27;33!CL:0000766;3.77e-26;69!CL:0002393;3.23e-24;6!CL:0002397;3.23e-24;6!CL:0000081;5.41e-22;11!CL:0000473;4.39e-21;39!CL:0000234;4.39e-21;39!CL:0000763;7.78e-15;100!CL:0000775;7.09e-13;3!CL:0000875;1.79e-12;3!CL:0002396;1.79e-12;3!CL:0000767;2.77e-12;3!CL:0000738;2.75e-09;136!CL:0000771;4.19e-09;2!CL:0002087;2.01e-07;104!CL:0000988;7.41e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.36e-59,42;CL:0002057,6.36e-59,42;CL:0000766,7.28e-56,72;CL:0000473,1.12e-50,48;CL:0000234,1.12e-50,48;CL:0002194,3.87e-39,59;CL:0000576,3.87e-39,59;CL:0000040,3.87e-39,59;CL:0000559,3.87e-39,59;CL:0000763,4.02e-39,108;CL:0000049,4.02e-39,108;CL:0002009,1.19e-37,61;CL:0000557,1.47e-36,67;CL:0002393,6.37e-35,9;CL:0002397,6.37e-35,9;CL:0000839,2.55e-34,66;CL:0000738,4.42e-33,136;CL:0000094,8.72e-31,8;CL:0000037,5.65e-30,168;CL:0000988,5.80e-28,177;CL:0002032,2.27e-23,161;CL:0000837,2.27e-23,161;CL:0000081,5.35e-22,11;CL:0002087,4.29e-20,115;CL:0002031,5.92e-16,120;CL:0000775,6.69e-13,3;CL:0000875,1.83e-12,3;CL:0002396,1.83e-12,3;CL:0000134,2.53e-12,354;CL:0000767,2.88e-12,3;CL:0002320,6.94e-12,361;CL:0000219,2.39e-10,386;CL:0000034,3.41e-09,441;CL:0000771,4.19e-09,2;CL:0000048,1.79e-08,427;CL:0000723,3.25e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;8.39e-40;42!CL:0000049;3.18e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.02e-47!102;UBERON:0003061!3.02e-47!102;UBERON:0002193!4.31e-41!112;UBERON:0002371!4.31e-37!80;UBERON:0001474!1.17e-34!86;UBERON:0004765!2.31e-29!101;UBERON:0001434!2.31e-29!101;UBERON:0002405!6.41e-26!115;UBERON:0003081!9.35e-16!216;UBERON:0002384!6.93e-15!375;UBERON:0000178!6.15e-13!15;UBERON:0000179!6.15e-13!15;UBERON:0000463!6.15e-13!15;UBERON:0002204!1.33e-12!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.76e-18;15!UBERON:0000179;8.76e-18;15!UBERON:0000463;8.76e-18;15!UBERON:0002390;5.34e-11;32!UBERON:0002193;8.24e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.77e-45,98;UBERON:0003061,1.77e-45,98;UBERON:0002193,1.82e-40,108;UBERON:0002371,6.01e-34,76;UBERON:0001474,5.87e-31,82;UBERON:0004765,1.38e-27,90;UBERON:0002405,1.80e-26,93;UBERON:0001434,3.96e-24,100;UBERON:0003081,1.44e-18,203;UBERON:0000178,8.24e-18,15;UBERON:0000179,8.24e-18,15;UBERON:0000463,8.24e-18,15;UBERON:0002204,1.15e-11,167;UBERON:0002384,2.73e-11,371;UBERON:0000926,2.62e-10,315;UBERON:0004120,2.62e-10,315;UBERON:0006603,2.62e-10,315 | |||
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|short_description=p@chr3:195627624..195627639,- | |short_description=p@chr3:195627624..195627639,- | ||
}} | }} |
Latest revision as of 19:46, 29 July 2015
Short description: | p@chr3:195627624..195627639, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:195627624..195627639, - |
Coexpression cluster: | C1163_Eosinophils_Neutrophils_CD14_Basophils_CD14CD16_Peripheral_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.77e-45 | 98 |
blood island | 1.77e-45 | 98 |
hemolymphoid system | 1.82e-40 | 108 |
bone marrow | 6.01e-34 | 76 |
bone element | 5.87e-31 | 82 |
skeletal element | 1.38e-27 | 90 |
immune system | 1.80e-26 | 93 |
skeletal system | 3.96e-24 | 100 |
lateral plate mesoderm | 1.44e-18 | 203 |
blood | 8.24e-18 | 15 |
haemolymphatic fluid | 8.24e-18 | 15 |
organism substance | 8.24e-18 | 15 |
musculoskeletal system | 1.15e-11 | 167 |
connective tissue | 2.73e-11 | 371 |
mesoderm | 2.62e-10 | 315 |
mesoderm-derived structure | 2.62e-10 | 315 |
presumptive mesoderm | 2.62e-10 | 315 |