FFCP PHASE1:Hg19::chr5:131825168..131825179,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3659 | |EntrezGene=3659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6116 | |HGNC=6116 | ||
|TSSclassifier=strong | |||
|UniProt=Q5FBX3 | |UniProt=Q5FBX3 | ||
|association_with_transcript=0bp_to_uc010jdt.1_5end | |association_with_transcript=0bp_to_uc010jdt.1_5end | ||
|cluster_id=chr5:131825168..131825179,- | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_4_at_IRF1_5end | |description=CAGE_peak_4_at_IRF1_5end | ||
|id=chr5:131825168..131825179,- | |id=chr5:131825168..131825179,- | ||
|ontology_enrichment_celltype=CL:0002057!1.82e-17!42;CL:0000738!5.72e-17!140;CL:0000860!7.63e-17!45;CL:0002087!1.09e-15!119;CL:0000766!1.93e-15!76;CL:0002031!1.54e-14!124;CL:0000839!7.63e-13!70;CL:0000037!1.45e-12!172;CL:0000566!1.45e-12!172;CL:0000557!1.60e-12!71;CL:0002194!4.29e-12!63;CL:0000576!4.29e-12!63;CL:0000040!4.29e-12!63;CL:0000559!4.29e-12!63;CL:0002032!8.53e-12!165;CL:0000837!8.53e-12!165;CL:0000988!1.69e-11!182;CL:0002009!1.91e-11!65;CL:0000763!7.84e-09!112;CL:0000049!7.84e-09!112 | |ontology_enrichment_celltype=CL:0002057!1.82e-17!42;CL:0000738!5.72e-17!140;CL:0000860!7.63e-17!45;CL:0002087!1.09e-15!119;CL:0000766!1.93e-15!76;CL:0002031!1.54e-14!124;CL:0000839!7.63e-13!70;CL:0000037!1.45e-12!172;CL:0000566!1.45e-12!172;CL:0000557!1.60e-12!71;CL:0002194!4.29e-12!63;CL:0000576!4.29e-12!63;CL:0000040!4.29e-12!63;CL:0000559!4.29e-12!63;CL:0002032!8.53e-12!165;CL:0000837!8.53e-12!165;CL:0000988!1.69e-11!182;CL:0002009!1.91e-11!65;CL:0000763!7.84e-09!112;CL:0000049!7.84e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.15e-35;33!CL:0002057;8.15e-35;33!CL:0000775;3.50e-32;3!CL:0000473;2.61e-23;39!CL:0000234;2.61e-23;39!CL:0000576;1.29e-18;48!CL:0000094;1.78e-12;8!CL:0000766;4.21e-12;69!CL:0000081;3.20e-09;11!CL:0000763;3.45e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.32e-32,3;CL:0000860,6.76e-29,42;CL:0002057,6.76e-29,42;CL:0000766,2.49e-26,72;CL:0000473,4.23e-25,48;CL:0000234,4.23e-25,48;CL:0002194,8.89e-20,59;CL:0000576,8.89e-20,59;CL:0000040,8.89e-20,59;CL:0000559,8.89e-20,59;CL:0002009,4.33e-19,61;CL:0000839,1.50e-17,66;CL:0000738,2.09e-17,136;CL:0000557,2.86e-17,67;CL:0000763,5.73e-17,108;CL:0000049,5.73e-17,108;CL:0000037,1.13e-13,168;CL:0002087,2.05e-13,115;CL:0000988,7.30e-13,177;CL:0000094,1.74e-12,8;CL:0002032,1.82e-12,161;CL:0000837,1.82e-12,161;CL:0002031,8.59e-11,120;CL:0000081,3.15e-09,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.88e-20;42!UBERON:0005425;1.32e-11;1!CL:0000049;1.50e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.20e-10!102;UBERON:0003061!1.20e-10!102;UBERON:0001474!4.32e-10!86;UBERON:0002371!5.05e-10!80;UBERON:0002193!1.03e-08!112;UBERON:0004765!7.49e-08!101;UBERON:0001434!7.49e-08!101;UBERON:0002405!5.48e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!1.20e-10!102;UBERON:0003061!1.20e-10!102;UBERON:0001474!4.32e-10!86;UBERON:0002371!5.05e-10!80;UBERON:0002193!1.03e-08!112;UBERON:0004765!7.49e-08!101;UBERON:0001434!7.49e-08!101;UBERON:0002405!5.48e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.32e-11;1!UBERON:0001785;1.32e-11;1!UBERON:0002464;1.32e-11;1!UBERON:0004904;1.32e-11;1!UBERON:0001021;1.32e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.55e-15,76;UBERON:0001474,7.26e-14,82;UBERON:0002390,1.33e-13,98;UBERON:0003061,1.33e-13,98;UBERON:0004765,1.66e-12,90;UBERON:0002193,3.42e-12,108;UBERON:0002405,4.67e-12,93;UBERON:0000941,1.07e-11,1;UBERON:0001785,1.07e-11,1;UBERON:0002464,1.07e-11,1;UBERON:0004904,1.07e-11,1;UBERON:0001021,1.07e-11,1;UBERON:0003902,1.07e-11,1;UBERON:0005425,1.07e-11,1;UBERON:0001434,4.13e-11,100 | |||
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| ||
|short_description=p4@IRF1 | |short_description=p4@IRF1 | ||
}} | }} |
Latest revision as of 05:19, 20 September 2015
Short description: | p4@IRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IRF1_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 0bp_to_uc010jdt.1_5end |
EntrezGene: | IRF1 |
HGNC: | 6116 |
UniProt: | Q5FBX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.32e-32 | 3 |
classical monocyte | 6.76e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.76e-29 | 42 |
myeloid leukocyte | 2.49e-26 | 72 |
defensive cell | 4.23e-25 | 48 |
phagocyte | 4.23e-25 | 48 |
monopoietic cell | 8.89e-20 | 59 |
monocyte | 8.89e-20 | 59 |
monoblast | 8.89e-20 | 59 |
promonocyte | 8.89e-20 | 59 |
macrophage dendritic cell progenitor | 4.33e-19 | 61 |
myeloid lineage restricted progenitor cell | 1.50e-17 | 66 |
leukocyte | 2.09e-17 | 136 |
granulocyte monocyte progenitor cell | 2.86e-17 | 67 |
myeloid cell | 5.73e-17 | 108 |
common myeloid progenitor | 5.73e-17 | 108 |
hematopoietic stem cell | 1.13e-13 | 168 |
nongranular leukocyte | 2.05e-13 | 115 |
hematopoietic cell | 7.30e-13 | 177 |
granulocyte | 1.74e-12 | 8 |
hematopoietic oligopotent progenitor cell | 1.82e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.82e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 8.59e-11 | 120 |
blood cell | 3.15e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.55e-15 | 76 |
bone element | 7.26e-14 | 82 |
hematopoietic system | 1.33e-13 | 98 |
blood island | 1.33e-13 | 98 |
skeletal element | 1.66e-12 | 90 |
hemolymphoid system | 3.42e-12 | 108 |
immune system | 4.67e-12 | 93 |
cranial nerve II | 1.07e-11 | 1 |
cranial nerve | 1.07e-11 | 1 |
nerve trunk | 1.07e-11 | 1 |
nerve connecting eye with brain | 1.07e-11 | 1 |
nerve | 1.07e-11 | 1 |
retinal neural layer | 1.07e-11 | 1 |
presumptive neural retina | 1.07e-11 | 1 |
skeletal system | 4.13e-11 | 100 |