FFCP PHASE1:Hg19::chr8:11710161..11710184,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:11710161..11710184,+ | |||
|coexpression_cluster_id=C632 | |||
|description=CAGE_peak_at_chr8:11710161..11710184,+ | |description=CAGE_peak_at_chr8:11710161..11710184,+ | ||
|id=chr8:11710161..11710184,+ | |id=chr8:11710161..11710184,+ | ||
|ontology_enrichment_celltype=CL:0002371!4.15e-07!591;CL:0002194!6.52e-07!63;CL:0000576!6.52e-07!63;CL:0000040!6.52e-07!63;CL:0000559!6.52e-07!63;CL:0002009!8.19e-07!65 | |ontology_enrichment_celltype=CL:0002371!4.15e-07!591;CL:0002194!6.52e-07!63;CL:0000576!6.52e-07!63;CL:0000040!6.52e-07!63;CL:0000559!6.52e-07!63;CL:0002009!8.19e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000235;8.83e-27;6!CL:0000840;1.89e-07;5!CL:0000135;7.73e-07;3!CL:0000388;7.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.91e-27,6;CL:0002194,1.26e-09,59;CL:0000576,1.26e-09,59;CL:0000040,1.26e-09,59;CL:0000559,1.26e-09,59;CL:0002009,3.17e-09,61;CL:0000839,2.49e-08,66;CL:0000557,3.62e-08,67;CL:0000840,1.87e-07,5;CL:0001029,1.87e-07,5;CL:0000766,2.02e-07,72;CL:0000135,7.32e-07,3;CL:0000388,7.32e-07,3;CL:0002619,9.74e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;7.73e-07;3!DOID:127;7.73e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.32e-07,3;DOID:127,7.32e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000926!1.96e-08!448;UBERON:0004120!1.96e-08!448;UBERON:0006603!1.96e-08!448;UBERON:0002204!9.29e-08!167;UBERON:0000468!1.75e-07!659;UBERON:0003081!4.82e-07!216 | |ontology_enrichment_uberon=UBERON:0000926!1.96e-08!448;UBERON:0004120!1.96e-08!448;UBERON:0006603!1.96e-08!448;UBERON:0002204!9.29e-08!167;UBERON:0000468!1.75e-07!659;UBERON:0003081!4.82e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;7.73e-07;3!UBERON:0000043;7.73e-07;3!UBERON:0007845;7.73e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.87e-08,76;UBERON:0000926,5.49e-08,315;UBERON:0004120,5.49e-08,315;UBERON:0006603,5.49e-08,315;UBERON:0001434,2.33e-07,100;UBERON:0001474,3.03e-07,82;UBERON:0003081,3.03e-07,203;UBERON:0007846,7.32e-07,3;UBERON:0000043,7.32e-07,3;UBERON:0007845,7.32e-07,3 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,3.00219895059391,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0,0,0,0.791300934685361,0.247532705920093,0,0,0,0.730310090387373,0,0,0.204000691244253,0.626909442956176,0,0,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0,0,1.79132379391939,2.26725566213286,0.77272670290256,0,0,0,0,0,0,0.575384784644301,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0.426224750532694,0.870627715885752,1.13477044938228,0,0.502497330513487,0.521482918420201,0,0.605399502633369,0,0,0,0.212604299965044,0.628975936525128,0.22465726229299,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0.579386075843295,0,1.45990461090791,0.189069634328136,0,0.175669571386252,0.130979075497713,0,0,7.14004266040303,3.48259474598534,6.1160661838678,0,0,0,0,0,0.347140501607594,1.69592382577203,1.25849830862972,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0.732186172644509,0.367663080345869,0.81014194788176,0.0892997282840798,0,0,3.06633274931766,0,1.09921046358244,0,0,0.436094052142534,0.496971951695318,0,0.397227542439656,0.286836620748814,0,0.560677600142307,3.20246987189115,0.49333509683432,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,1.87296046098192,0,1.79338416662161,0.117434498643765,0,0,0,0.368502951935304,0.103325781175765,0,0.741800787835671,0,0.718618141816238,0,0.250237039743928,0,0,0.612975591598039,0.600952235626387,0.113432183160021,0.179389635688862,0.213557388818567,0.423863802319124,0.900273288253207,0,0.257640540045629,0,0,0,0,0,0,0,0,0.169560592310488,1.15956511897978,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0.8231480226628,0,1.26755034821831,0.982827216677626,0,0,0,0.343135620597051,0.548751427043128,0,0.201057944823262,0,0.325808305310325,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0.790204397959275,0,5.90920814609754,1.63802985597466,10.7014436847884,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0.719792448923265,0.600686115687835,0.285826432630578,0,0,0,0.258543431515556,0,1.690605505112,0.26593811658487,0,0,0,0.266422179016099,0,0,0.823240336780769,0.325736184293735,0,1.58390374586686,0,0,0.199945982364114,4.86495122564762,6.52934218861764,6.32501818449095,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0,0.112085143993527,0,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0.553107505625109,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.841980283299221,0.256278298511402,0,0.160853921143607,0,0.616838775210622,0.355123450626254,0,0,0.581051892299796,0.120859449591622,1.20303882181971,0.0920809889358963,0.114814448164607,0,0.786746489756545,0,0.15403067420883,0,0,0.105551628892876,1.13733384070897,0.340187410553031,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0.082509499920588,0,0,0,0.290012154876366,0.462145851343933,0.460511024178389,0.275673144969061,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.384380134730212,0,0.2023155617111,0.464845549297286,0.62962469366128,0,0.616067160352178,0,0,0.18532421910392,0,0,0,0.38126038784765,0,0.855877976067841,0.318203247925937,0,0.359744915166629,1.64722217841633,0.235624804691373,0,1.58510321173008,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0,1.13008116620243,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0.196498082026242,0,0.354761064070598,1.47775344708365,1.31717957183961,0,0,0,1.34060455107157,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0.159426272728822,0,0,0,0.324621940274555,0,0.228234679033192,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.242721043499027,0.111443384277478,0,0.23874448473769,0.593929361665277,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0.102268682502155,0,2.17727711363265,0,0.179021174675609,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0.0897576444097721,0,0,0.457987967009312,0.533034776018635,0,0.470940769185074,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0.0882561266915003,0.225980740780532,0.1370419246467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| ||
|short_description=p@chr8:11710161..11710184,+ | |short_description=p@chr8:11710161..11710184,+ | ||
}} | }} |
Latest revision as of 14:15, 31 July 2015
Short description: | p@chr8:11710161..11710184, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:11710161..11710184, + |
Coexpression cluster: | C632_Monocytederived_Macrophage_Dendritic_CD14_Keratinocyte_basal_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.91e-27 | 6 |
monopoietic cell | 1.26e-09 | 59 |
monocyte | 1.26e-09 | 59 |
monoblast | 1.26e-09 | 59 |
promonocyte | 1.26e-09 | 59 |
macrophage dendritic cell progenitor | 3.17e-09 | 61 |
myeloid lineage restricted progenitor cell | 2.49e-08 | 66 |
granulocyte monocyte progenitor cell | 3.62e-08 | 67 |
immature conventional dendritic cell | 1.87e-07 | 5 |
common dendritic progenitor | 1.87e-07 | 5 |
myeloid leukocyte | 2.02e-07 | 72 |
fibrocyte | 7.32e-07 | 3 |
tendon cell | 7.32e-07 | 3 |
adult endothelial progenitor cell | 9.74e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.87e-08 | 76 |
mesoderm | 5.49e-08 | 315 |
mesoderm-derived structure | 5.49e-08 | 315 |
presumptive mesoderm | 5.49e-08 | 315 |
skeletal system | 2.33e-07 | 100 |
bone element | 3.03e-07 | 82 |
lateral plate mesoderm | 3.03e-07 | 203 |
dense regular connective tissue | 7.32e-07 | 3 |
tendon | 7.32e-07 | 3 |
regular connective tissue | 7.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.32e-07 | 3 |
leiomyoma | 7.32e-07 | 3 |