FFCP PHASE1:Hg19::chr15:90931466..90931544,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:90931466..90931544,+
|short_description=p1@IQGAP1
|description=CAGE_peak_1_at_IQGAP1_5end
|association_with_transcript=0bp_to_ENST00000560418,ENST00000560...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8826 | |EntrezGene=8826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6110 | |HGNC=6110 | ||
|TSSclassifier=strong | |||
|UniProt=P46940 | |UniProt=P46940 | ||
|association_with_transcript=0bp_to_ENST00000560418,ENST00000560738,NM_003870,uc002bpl.1_5end | |||
|cluster_id=chr15:90931466..90931544,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_IQGAP1_5end | |||
|id=chr15:90931466..90931544,+ | |||
|ontology_enrichment_celltype=CL:0000766!7.51e-39!76;CL:0000557!2.25e-34!71;CL:0002009!3.91e-32!65;CL:0002194!4.47e-31!63;CL:0000576!4.47e-31!63;CL:0000040!4.47e-31!63;CL:0000559!4.47e-31!63;CL:0000839!1.75e-30!70;CL:0000738!1.29e-27!140;CL:0002057!6.05e-26!42;CL:0000860!9.08e-26!45;CL:0002031!1.50e-19!124;CL:0000763!2.62e-19!112;CL:0000049!2.62e-19!112;CL:0002087!5.68e-19!119;CL:0000037!2.63e-14!172;CL:0000566!2.63e-14!172;CL:0002032!9.58e-14!165;CL:0000837!9.58e-14!165;CL:0000988!2.20e-11!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.05e-19;33!CL:0002057;1.05e-19;33!CL:0000473;4.66e-19;39!CL:0000234;4.66e-19;39!CL:0000576;2.44e-17;48!CL:0000766;1.61e-16;69!CL:0000738;4.33e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.13e-38,72;CL:0000557,3.62e-34,67;CL:0002009,5.80e-32,61;CL:0002194,6.57e-31,59;CL:0000576,6.57e-31,59;CL:0000040,6.57e-31,59;CL:0000559,6.57e-31,59;CL:0000839,3.34e-30,66;CL:0000473,6.11e-29,48;CL:0000234,6.11e-29,48;CL:0000738,5.76e-27,136;CL:0000860,6.05e-26,42;CL:0002057,6.05e-26,42;CL:0002031,6.14e-19,120;CL:0000763,1.04e-18,108;CL:0000049,1.04e-18,108;CL:0002087,2.29e-18,115;CL:0000037,1.00e-13,168;CL:0002032,3.60e-13,161;CL:0000837,3.60e-13,161;CL:0000988,3.69e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.35e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.43e-31!102;UBERON:0003061!5.43e-31!102;UBERON:0002193!1.10e-30!112;UBERON:0002371!6.44e-28!80;UBERON:0001474!8.51e-24!86;UBERON:0004765!1.40e-22!101;UBERON:0001434!1.40e-22!101;UBERON:0003081!8.02e-18!216;UBERON:0002405!5.81e-16!115;UBERON:0002204!1.05e-15!167;UBERON:0000926!3.50e-08!448;UBERON:0004120!3.50e-08!448;UBERON:0006603!3.50e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.82e-30,98;UBERON:0003061,1.82e-30,98;UBERON:0002193,4.07e-30,108;UBERON:0002371,1.72e-27,76;UBERON:0002405,8.30e-27,93;UBERON:0001474,2.77e-23,82;UBERON:0004765,2.02e-22,90;UBERON:0001434,9.22e-21,100;UBERON:0003081,4.57e-19,203;UBERON:0002204,1.80e-14,167;UBERON:0000926,7.22e-14,315;UBERON:0004120,7.22e-14,315;UBERON:0006603,7.22e-14,315 | |||
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| ||
|short_description=p1@IQGAP1 | |||
}} | }} |
Latest revision as of 19:40, 19 September 2015
Short description: | p1@IQGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IQGAP1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000560418, ENST00000560738, NM_003870, uc002bpl.1_5end |
EntrezGene: | IQGAP1 |
HGNC: | 6110 |
UniProt: | P46940 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.13e-38 | 72 |
granulocyte monocyte progenitor cell | 3.62e-34 | 67 |
macrophage dendritic cell progenitor | 5.80e-32 | 61 |
monopoietic cell | 6.57e-31 | 59 |
monocyte | 6.57e-31 | 59 |
monoblast | 6.57e-31 | 59 |
promonocyte | 6.57e-31 | 59 |
myeloid lineage restricted progenitor cell | 3.34e-30 | 66 |
defensive cell | 6.11e-29 | 48 |
phagocyte | 6.11e-29 | 48 |
leukocyte | 5.76e-27 | 136 |
classical monocyte | 6.05e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.05e-26 | 42 |
hematopoietic lineage restricted progenitor cell | 6.14e-19 | 120 |
myeloid cell | 1.04e-18 | 108 |
common myeloid progenitor | 1.04e-18 | 108 |
nongranular leukocyte | 2.29e-18 | 115 |
hematopoietic stem cell | 1.00e-13 | 168 |
hematopoietic oligopotent progenitor cell | 3.60e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.60e-13 | 161 |
hematopoietic cell | 3.69e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.82e-30 | 98 |
blood island | 1.82e-30 | 98 |
hemolymphoid system | 4.07e-30 | 108 |
bone marrow | 1.72e-27 | 76 |
immune system | 8.30e-27 | 93 |
bone element | 2.77e-23 | 82 |
skeletal element | 2.02e-22 | 90 |
skeletal system | 9.22e-21 | 100 |
lateral plate mesoderm | 4.57e-19 | 203 |
musculoskeletal system | 1.80e-14 | 167 |
mesoderm | 7.22e-14 | 315 |
mesoderm-derived structure | 7.22e-14 | 315 |
presumptive mesoderm | 7.22e-14 | 315 |